Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:13086:13121
Extra
PDB:
ATOM 1 O3' G A3085 8.358 74.737 75.776 1.00 60.95 O
ATOM 2 P U A3086 7.285 75.145 76.888 1.00 67.67 P
ATOM 3 OP1 U A3086 7.260 74.042 77.885 1.00 67.16 O
ATOM 4 OP2 U A3086 6.026 75.505 76.184 1.00 68.05 O
ATOM 5 O5' U A3086 7.963 76.434 77.521 1.00 68.30 O
ATOM 6 C5' U A3086 9.307 76.368 77.993 1.00 68.07 C
ATOM 7 C4' U A3086 10.008 77.698 77.918 1.00 68.68 C
ATOM 8 O4' U A3086 10.239 78.033 76.538 1.00 68.71 O
ATOM 9 C3' U A3086 9.253 78.873 78.512 1.00 69.52 C
ATOM 10 O3' U A3086 10.190 79.814 79.050 1.00 69.94 O
ATOM 11 C2' U A3086 8.568 79.468 77.296 1.00 69.87 C
ATOM 12 O2' U A3086 8.249 80.810 77.445 1.00 70.71 O
ATOM 13 C1' U A3086 9.626 79.262 76.229 1.00 69.49 C
ATOM 14 N1 U A3086 9.117 79.158 74.850 1.00 69.42 N
ATOM 15 C2 U A3086 9.161 80.259 74.069 1.00 70.00 C
ATOM 16 O2 U A3086 9.509 81.298 74.518 1.00 70.56 O
ATOM 17 N3 U A3086 8.754 80.143 72.774 1.00 69.93 N
ATOM 18 C4 U A3086 8.324 79.002 72.156 1.00 69.33 C
ATOM 19 O4 U A3086 7.970 79.060 70.978 1.00 69.38 O
ATOM 20 C5 U A3086 8.336 77.849 73.019 1.00 68.72 C
ATOM 21 C6 U A3086 8.735 77.956 74.299 1.00 68.78 C
ATOM 22 P A A3087 10.246 80.070 80.642 1.00 73.66 P
ATOM 23 OP1 A A3087 8.995 79.533 81.206 1.00 73.63 O
ATOM 24 OP2 A A3087 10.561 81.506 80.848 1.00 74.46 O
ATOM 25 O5' A A3087 11.465 79.169 81.122 1.00 73.00 O
TER
ATOM 1 O3' U B3120 8.720 85.079 73.770 1.00 74.80 O
ATOM 2 P G B3121 7.371 85.052 72.916 1.00 71.13 P
ATOM 3 OP1 G B3121 6.903 86.453 72.763 1.00 72.07 O
ATOM 4 OP2 G B3121 6.466 84.054 73.565 1.00 70.74 O
ATOM 5 O5' G B3121 7.880 84.499 71.522 1.00 70.64 O
ATOM 6 C5' G B3121 9.253 84.587 71.169 1.00 70.42 C
ATOM 7 C4' G B3121 9.880 83.225 70.974 1.00 69.49 C
ATOM 8 O4' G B3121 8.895 82.305 70.447 1.00 69.10 O
ATOM 9 C3' G B3121 11.029 83.155 69.972 1.00 69.21 C
ATOM 10 O3' G B3121 12.273 83.542 70.522 1.00 69.24 O
ATOM 11 C2' G B3121 11.009 81.694 69.541 1.00 68.34 C
ATOM 12 O2' G B3121 11.735 80.888 70.452 1.00 67.78 O
ATOM 13 C1' G B3121 9.531 81.327 69.660 1.00 68.39 C
ATOM 14 N9 G B3121 8.876 81.226 68.340 1.00 68.42 N
ATOM 15 C8 G B3121 8.402 80.049 67.803 1.00 67.82 C
ATOM 16 N7 G B3121 7.914 80.163 66.600 1.00 67.95 N
ATOM 17 C5 G B3121 8.097 81.505 66.328 1.00 68.69 C
ATOM 18 C6 G B3121 7.760 82.215 65.169 1.00 69.16 C
ATOM 19 O6 G B3121 7.215 81.743 64.177 1.00 68.99 O
ATOM 20 N1 G B3121 8.111 83.553 65.233 1.00 69.88 N
ATOM 21 C2 G B3121 8.707 84.110 66.322 1.00 70.10 C
ATOM 22 N2 G B3121 8.976 85.412 66.246 1.00 70.83 N
ATOM 23 N3 G B3121 9.039 83.460 67.417 1.00 69.67 N
ATOM 24 C4 G B3121 8.706 82.168 67.359 1.00 68.97 C
ATOM 25 P A B3122 12.809 85.064 70.433 1.00 65.17 P
ATOM 26 OP1 A B3122 11.657 85.954 70.129 1.00 65.89 O
ATOM 27 OP2 A B3122 13.971 85.074 69.511 1.00 64.95 O
ATOM 28 O5' A B3122 13.307 85.320 71.924 1.00 65.31 O
TER
ATOM 2 P U A3086 7.285 75.145 76.888 1.00 67.67 P
ATOM 3 OP1 U A3086 7.260 74.042 77.885 1.00 67.16 O
ATOM 4 OP2 U A3086 6.026 75.505 76.184 1.00 68.05 O
ATOM 5 O5' U A3086 7.963 76.434 77.521 1.00 68.30 O
ATOM 6 C5' U A3086 9.307 76.368 77.993 1.00 68.07 C
ATOM 7 C4' U A3086 10.008 77.698 77.918 1.00 68.68 C
ATOM 8 O4' U A3086 10.239 78.033 76.538 1.00 68.71 O
ATOM 9 C3' U A3086 9.253 78.873 78.512 1.00 69.52 C
ATOM 10 O3' U A3086 10.190 79.814 79.050 1.00 69.94 O
ATOM 11 C2' U A3086 8.568 79.468 77.296 1.00 69.87 C
ATOM 12 O2' U A3086 8.249 80.810 77.445 1.00 70.71 O
ATOM 13 C1' U A3086 9.626 79.262 76.229 1.00 69.49 C
ATOM 14 N1 U A3086 9.117 79.158 74.850 1.00 69.42 N
ATOM 15 C2 U A3086 9.161 80.259 74.069 1.00 70.00 C
ATOM 16 O2 U A3086 9.509 81.298 74.518 1.00 70.56 O
ATOM 17 N3 U A3086 8.754 80.143 72.774 1.00 69.93 N
ATOM 18 C4 U A3086 8.324 79.002 72.156 1.00 69.33 C
ATOM 19 O4 U A3086 7.970 79.060 70.978 1.00 69.38 O
ATOM 20 C5 U A3086 8.336 77.849 73.019 1.00 68.72 C
ATOM 21 C6 U A3086 8.735 77.956 74.299 1.00 68.78 C
ATOM 22 P A A3087 10.246 80.070 80.642 1.00 73.66 P
ATOM 23 OP1 A A3087 8.995 79.533 81.206 1.00 73.63 O
ATOM 24 OP2 A A3087 10.561 81.506 80.848 1.00 74.46 O
ATOM 25 O5' A A3087 11.465 79.169 81.122 1.00 73.00 O
TER
ATOM 1 O3' U B3120 8.720 85.079 73.770 1.00 74.80 O
ATOM 2 P G B3121 7.371 85.052 72.916 1.00 71.13 P
ATOM 3 OP1 G B3121 6.903 86.453 72.763 1.00 72.07 O
ATOM 4 OP2 G B3121 6.466 84.054 73.565 1.00 70.74 O
ATOM 5 O5' G B3121 7.880 84.499 71.522 1.00 70.64 O
ATOM 6 C5' G B3121 9.253 84.587 71.169 1.00 70.42 C
ATOM 7 C4' G B3121 9.880 83.225 70.974 1.00 69.49 C
ATOM 8 O4' G B3121 8.895 82.305 70.447 1.00 69.10 O
ATOM 9 C3' G B3121 11.029 83.155 69.972 1.00 69.21 C
ATOM 10 O3' G B3121 12.273 83.542 70.522 1.00 69.24 O
ATOM 11 C2' G B3121 11.009 81.694 69.541 1.00 68.34 C
ATOM 12 O2' G B3121 11.735 80.888 70.452 1.00 67.78 O
ATOM 13 C1' G B3121 9.531 81.327 69.660 1.00 68.39 C
ATOM 14 N9 G B3121 8.876 81.226 68.340 1.00 68.42 N
ATOM 15 C8 G B3121 8.402 80.049 67.803 1.00 67.82 C
ATOM 16 N7 G B3121 7.914 80.163 66.600 1.00 67.95 N
ATOM 17 C5 G B3121 8.097 81.505 66.328 1.00 68.69 C
ATOM 18 C6 G B3121 7.760 82.215 65.169 1.00 69.16 C
ATOM 19 O6 G B3121 7.215 81.743 64.177 1.00 68.99 O
ATOM 20 N1 G B3121 8.111 83.553 65.233 1.00 69.88 N
ATOM 21 C2 G B3121 8.707 84.110 66.322 1.00 70.10 C
ATOM 22 N2 G B3121 8.976 85.412 66.246 1.00 70.83 N
ATOM 23 N3 G B3121 9.039 83.460 67.417 1.00 69.67 N
ATOM 24 C4 G B3121 8.706 82.168 67.359 1.00 68.97 C
ATOM 25 P A B3122 12.809 85.064 70.433 1.00 65.17 P
ATOM 26 OP1 A B3122 11.657 85.954 70.129 1.00 65.89 O
ATOM 27 OP2 A B3122 13.971 85.074 69.511 1.00 64.95 O
ATOM 28 O5' A B3122 13.307 85.320 71.924 1.00 65.31 O
TER
Atoms:
C4: (8.324,79.002,72.156)
N3: (8.754,80.143,72.774)
OP1: (7.260,74.042,77.885)
OP2: (6.026,75.505,76.184)
C2: (9.161,80.259,74.069)
C1': (9.626,79.262,76.229)
C3': (9.253,78.873,78.512)
O5': (7.963,76.434,77.521)
O4': (10.239,78.033,76.538)
C5': (9.307,76.368,77.993)
P: (7.285,75.145,76.888)
C4': (10.008,77.698,77.918)
C2': (8.568,79.468,77.296)
O2': (8.249,80.810,77.445)
N1: (9.117,79.158,74.850)
O4: (7.970,79.060,70.978)
O2: (9.509,81.298,74.518)
C6: (8.735,77.956,74.299)
C5: (8.336,77.849,73.019)
O3': (10.190,79.814,79.050)
N3: (8.754,80.143,72.774)
OP1: (7.260,74.042,77.885)
OP2: (6.026,75.505,76.184)
C2: (9.161,80.259,74.069)
C1': (9.626,79.262,76.229)
C3': (9.253,78.873,78.512)
O5': (7.963,76.434,77.521)
O4': (10.239,78.033,76.538)
C5': (9.307,76.368,77.993)
P: (7.285,75.145,76.888)
C4': (10.008,77.698,77.918)
C2': (8.568,79.468,77.296)
O2': (8.249,80.810,77.445)
N1: (9.117,79.158,74.850)
O4: (7.970,79.060,70.978)
O2: (9.509,81.298,74.518)
C6: (8.735,77.956,74.299)
C5: (8.336,77.849,73.019)
O3': (10.190,79.814,79.050)
OP1: (6.903,86.453,72.763)
OP2: (6.466,84.054,73.565)
C3': (11.029,83.155,69.972)
C1': (9.531,81.327,69.660)
C5': (9.253,84.587,71.169)
O6: (7.215,81.743,64.177)
O4': (8.895,82.305,70.447)
C8: (8.402,80.049,67.803)
C2: (8.707,84.110,66.322)
C6: (7.760,82.215,65.169)
C5: (8.097,81.505,66.328)
C4: (8.706,82.168,67.359)
P: (7.371,85.052,72.916)
C4': (9.880,83.225,70.974)
C2': (11.009,81.694,69.541)
O2': (11.735,80.888,70.452)
N1: (8.111,83.553,65.233)
N2: (8.976,85.412,66.246)
N3: (9.039,83.460,67.417)
N7: (7.914,80.163,66.600)
N9: (8.876,81.226,68.340)
O5': (7.880,84.499,71.522)
O3': (12.273,83.542,70.522)
OP2: (6.466,84.054,73.565)
C3': (11.029,83.155,69.972)
C1': (9.531,81.327,69.660)
C5': (9.253,84.587,71.169)
O6: (7.215,81.743,64.177)
O4': (8.895,82.305,70.447)
C8: (8.402,80.049,67.803)
C2: (8.707,84.110,66.322)
C6: (7.760,82.215,65.169)
C5: (8.097,81.505,66.328)
C4: (8.706,82.168,67.359)
P: (7.371,85.052,72.916)
C4': (9.880,83.225,70.974)
C2': (11.009,81.694,69.541)
O2': (11.735,80.888,70.452)
N1: (8.111,83.553,65.233)
N2: (8.976,85.412,66.246)
N3: (9.039,83.460,67.417)
N7: (7.914,80.163,66.600)
N9: (8.876,81.226,68.340)
O5': (7.880,84.499,71.522)
O3': (12.273,83.542,70.522)
Image (generated by PyMOL):