Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DS7:A20:A49
Extra
PDB:
ATOM 1 O3' U A 19 -15.443 16.343 -46.187 1.00 18.70 O
ATOM 2 P A A 20 -14.713 17.324 -47.276 1.00 17.79 P
ATOM 3 OP1 A A 20 -15.158 18.693 -46.856 1.00 17.21 O
ATOM 4 OP2 A A 20 -14.995 16.919 -48.669 1.00 15.07 O
ATOM 5 O5' A A 20 -13.182 17.152 -47.036 1.00 16.62 O
ATOM 6 C5' A A 20 -12.522 17.676 -45.836 1.00 16.41 C
ATOM 7 C4' A A 20 -11.028 17.387 -45.930 1.00 20.24 C
ATOM 8 O4' A A 20 -10.800 15.943 -45.844 1.00 19.00 O
ATOM 9 C3' A A 20 -10.535 17.792 -47.314 1.00 20.40 C
ATOM 10 O3' A A 20 -9.263 18.357 -47.155 1.00 21.58 O
ATOM 11 C2' A A 20 -10.522 16.519 -48.151 1.00 20.44 C
ATOM 12 O2' A A 20 -9.487 16.469 -49.120 1.00 23.77 O
ATOM 13 C1' A A 20 -10.297 15.449 -47.082 1.00 20.49 C
ATOM 14 N9 A A 20 -10.949 14.172 -47.389 1.00 20.40 N
ATOM 15 C8 A A 20 -12.274 13.765 -47.153 1.00 20.09 C
ATOM 16 N7 A A 20 -12.538 12.542 -47.572 1.00 19.49 N
ATOM 17 C5 A A 20 -11.309 12.116 -48.105 1.00 19.21 C
ATOM 18 C6 A A 20 -10.896 10.925 -48.721 1.00 19.80 C
ATOM 19 N6 A A 20 -11.710 9.869 -48.885 1.00 19.75 N
ATOM 20 N1 A A 20 -9.599 10.851 -49.167 1.00 19.56 N
ATOM 21 C2 A A 20 -8.800 11.884 -48.987 1.00 18.73 C
ATOM 22 N3 A A 20 -9.058 13.062 -48.419 1.00 18.34 N
ATOM 23 C4 A A 20 -10.337 13.124 -48.007 1.00 21.13 C
ATOM 24 P U A 21 -9.094 19.956 -47.036 1.00 21.76 P
ATOM 25 OP1 U A 21 -9.735 20.496 -48.236 1.00 20.54 O
ATOM 26 OP2 U A 21 -7.602 20.042 -46.851 1.00 22.57 O
ATOM 27 O5' U A 21 -9.913 20.361 -45.747 1.00 20.73 O
TER
ATOM 1 O3' U B 48 -20.184 10.583 -50.779 1.00 37.18 O
ATOM 2 P A B 49 -21.659 10.031 -51.156 1.00 38.03 P
ATOM 3 OP1 A B 49 -21.895 9.910 -52.601 1.00 38.74 O
ATOM 4 OP2 A B 49 -22.424 10.947 -50.323 1.00 37.34 O
ATOM 5 O5' A B 49 -21.744 8.577 -50.544 1.00 37.06 O
ATOM 6 C5' A B 49 -21.921 8.406 -49.178 1.00 34.47 C
ATOM 7 C4' A B 49 -21.209 7.165 -48.727 1.00 32.80 C
ATOM 8 O4' A B 49 -19.781 7.209 -49.005 1.00 31.09 O
ATOM 9 C3' A B 49 -21.347 7.017 -47.228 1.00 32.09 C
ATOM 10 O3' A B 49 -22.504 6.214 -47.081 1.00 30.74 O
ATOM 11 C2' A B 49 -20.048 6.359 -46.788 1.00 30.20 C
ATOM 12 O2' A B 49 -20.083 4.968 -46.981 1.00 30.21 O
ATOM 13 C1' A B 49 -19.050 6.927 -47.805 1.00 29.22 C
ATOM 14 N9 A B 49 -18.373 8.181 -47.418 1.00 27.86 N
ATOM 15 C8 A B 49 -18.884 9.328 -46.860 1.00 25.99 C
ATOM 16 N7 A B 49 -18.006 10.303 -46.778 1.00 27.26 N
ATOM 17 C5 A B 49 -16.834 9.754 -47.284 1.00 25.58 C
ATOM 18 C6 A B 49 -15.531 10.272 -47.459 1.00 24.93 C
ATOM 19 N6 A B 49 -15.150 11.502 -47.042 1.00 25.01 N
ATOM 20 N1 A B 49 -14.615 9.480 -48.033 1.00 24.27 N
ATOM 21 C2 A B 49 -14.950 8.228 -48.356 1.00 22.99 C
ATOM 22 N3 A B 49 -16.140 7.603 -48.191 1.00 23.50 N
ATOM 23 C4 A B 49 -17.043 8.436 -47.658 1.00 25.66 C
ATOM 24 P A B 50 -23.394 6.376 -45.797 1.00 31.70 P
ATOM 25 OP1 A B 50 -24.578 5.465 -45.880 1.00 30.38 O
ATOM 26 OP2 A B 50 -23.544 7.823 -45.644 1.00 31.28 O
ATOM 27 O5' A B 50 -22.492 5.720 -44.632 1.00 28.34 O
TER
ATOM 2 P A A 20 -14.713 17.324 -47.276 1.00 17.79 P
ATOM 3 OP1 A A 20 -15.158 18.693 -46.856 1.00 17.21 O
ATOM 4 OP2 A A 20 -14.995 16.919 -48.669 1.00 15.07 O
ATOM 5 O5' A A 20 -13.182 17.152 -47.036 1.00 16.62 O
ATOM 6 C5' A A 20 -12.522 17.676 -45.836 1.00 16.41 C
ATOM 7 C4' A A 20 -11.028 17.387 -45.930 1.00 20.24 C
ATOM 8 O4' A A 20 -10.800 15.943 -45.844 1.00 19.00 O
ATOM 9 C3' A A 20 -10.535 17.792 -47.314 1.00 20.40 C
ATOM 10 O3' A A 20 -9.263 18.357 -47.155 1.00 21.58 O
ATOM 11 C2' A A 20 -10.522 16.519 -48.151 1.00 20.44 C
ATOM 12 O2' A A 20 -9.487 16.469 -49.120 1.00 23.77 O
ATOM 13 C1' A A 20 -10.297 15.449 -47.082 1.00 20.49 C
ATOM 14 N9 A A 20 -10.949 14.172 -47.389 1.00 20.40 N
ATOM 15 C8 A A 20 -12.274 13.765 -47.153 1.00 20.09 C
ATOM 16 N7 A A 20 -12.538 12.542 -47.572 1.00 19.49 N
ATOM 17 C5 A A 20 -11.309 12.116 -48.105 1.00 19.21 C
ATOM 18 C6 A A 20 -10.896 10.925 -48.721 1.00 19.80 C
ATOM 19 N6 A A 20 -11.710 9.869 -48.885 1.00 19.75 N
ATOM 20 N1 A A 20 -9.599 10.851 -49.167 1.00 19.56 N
ATOM 21 C2 A A 20 -8.800 11.884 -48.987 1.00 18.73 C
ATOM 22 N3 A A 20 -9.058 13.062 -48.419 1.00 18.34 N
ATOM 23 C4 A A 20 -10.337 13.124 -48.007 1.00 21.13 C
ATOM 24 P U A 21 -9.094 19.956 -47.036 1.00 21.76 P
ATOM 25 OP1 U A 21 -9.735 20.496 -48.236 1.00 20.54 O
ATOM 26 OP2 U A 21 -7.602 20.042 -46.851 1.00 22.57 O
ATOM 27 O5' U A 21 -9.913 20.361 -45.747 1.00 20.73 O
TER
ATOM 1 O3' U B 48 -20.184 10.583 -50.779 1.00 37.18 O
ATOM 2 P A B 49 -21.659 10.031 -51.156 1.00 38.03 P
ATOM 3 OP1 A B 49 -21.895 9.910 -52.601 1.00 38.74 O
ATOM 4 OP2 A B 49 -22.424 10.947 -50.323 1.00 37.34 O
ATOM 5 O5' A B 49 -21.744 8.577 -50.544 1.00 37.06 O
ATOM 6 C5' A B 49 -21.921 8.406 -49.178 1.00 34.47 C
ATOM 7 C4' A B 49 -21.209 7.165 -48.727 1.00 32.80 C
ATOM 8 O4' A B 49 -19.781 7.209 -49.005 1.00 31.09 O
ATOM 9 C3' A B 49 -21.347 7.017 -47.228 1.00 32.09 C
ATOM 10 O3' A B 49 -22.504 6.214 -47.081 1.00 30.74 O
ATOM 11 C2' A B 49 -20.048 6.359 -46.788 1.00 30.20 C
ATOM 12 O2' A B 49 -20.083 4.968 -46.981 1.00 30.21 O
ATOM 13 C1' A B 49 -19.050 6.927 -47.805 1.00 29.22 C
ATOM 14 N9 A B 49 -18.373 8.181 -47.418 1.00 27.86 N
ATOM 15 C8 A B 49 -18.884 9.328 -46.860 1.00 25.99 C
ATOM 16 N7 A B 49 -18.006 10.303 -46.778 1.00 27.26 N
ATOM 17 C5 A B 49 -16.834 9.754 -47.284 1.00 25.58 C
ATOM 18 C6 A B 49 -15.531 10.272 -47.459 1.00 24.93 C
ATOM 19 N6 A B 49 -15.150 11.502 -47.042 1.00 25.01 N
ATOM 20 N1 A B 49 -14.615 9.480 -48.033 1.00 24.27 N
ATOM 21 C2 A B 49 -14.950 8.228 -48.356 1.00 22.99 C
ATOM 22 N3 A B 49 -16.140 7.603 -48.191 1.00 23.50 N
ATOM 23 C4 A B 49 -17.043 8.436 -47.658 1.00 25.66 C
ATOM 24 P A B 50 -23.394 6.376 -45.797 1.00 31.70 P
ATOM 25 OP1 A B 50 -24.578 5.465 -45.880 1.00 30.38 O
ATOM 26 OP2 A B 50 -23.544 7.823 -45.644 1.00 31.28 O
ATOM 27 O5' A B 50 -22.492 5.720 -44.632 1.00 28.34 O
TER
Atoms:
OP1: (-15.158,18.693,-46.856)
OP2: (-14.995,16.919,-48.669)
C3': (-10.535,17.792,-47.314)
C1': (-10.297,15.449,-47.082)
C5': (-12.522,17.676,-45.836)
O4': (-10.800,15.943,-45.844)
C8: (-12.274,13.765,-47.153)
O2': (-9.487,16.469,-49.120)
C6: (-10.896,10.925,-48.721)
C5: (-11.309,12.116,-48.105)
C4: (-10.337,13.124,-48.007)
P: (-14.713,17.324,-47.276)
C4': (-11.028,17.387,-45.930)
C2': (-10.522,16.519,-48.151)
C2: (-8.800,11.884,-48.987)
N1: (-9.599,10.851,-49.167)
N3: (-9.058,13.062,-48.419)
N6: (-11.710,9.869,-48.885)
N7: (-12.538,12.542,-47.572)
N9: (-10.949,14.172,-47.389)
O5': (-13.182,17.152,-47.036)
O3': (-9.263,18.357,-47.155)
OP2: (-14.995,16.919,-48.669)
C3': (-10.535,17.792,-47.314)
C1': (-10.297,15.449,-47.082)
C5': (-12.522,17.676,-45.836)
O4': (-10.800,15.943,-45.844)
C8: (-12.274,13.765,-47.153)
O2': (-9.487,16.469,-49.120)
C6: (-10.896,10.925,-48.721)
C5: (-11.309,12.116,-48.105)
C4: (-10.337,13.124,-48.007)
P: (-14.713,17.324,-47.276)
C4': (-11.028,17.387,-45.930)
C2': (-10.522,16.519,-48.151)
C2: (-8.800,11.884,-48.987)
N1: (-9.599,10.851,-49.167)
N3: (-9.058,13.062,-48.419)
N6: (-11.710,9.869,-48.885)
N7: (-12.538,12.542,-47.572)
N9: (-10.949,14.172,-47.389)
O5': (-13.182,17.152,-47.036)
O3': (-9.263,18.357,-47.155)
OP1: (-21.895,9.910,-52.601)
OP2: (-22.424,10.947,-50.323)
C3': (-21.347,7.017,-47.228)
C1': (-19.050,6.927,-47.805)
C5': (-21.921,8.406,-49.178)
O4': (-19.781,7.209,-49.005)
C8: (-18.884,9.328,-46.860)
O2': (-20.083,4.968,-46.981)
C6: (-15.531,10.272,-47.459)
C5: (-16.834,9.754,-47.284)
C4: (-17.043,8.436,-47.658)
P: (-21.659,10.031,-51.156)
C4': (-21.209,7.165,-48.727)
C2': (-20.048,6.359,-46.788)
C2: (-14.950,8.228,-48.356)
N1: (-14.615,9.480,-48.033)
N3: (-16.140,7.603,-48.191)
N6: (-15.150,11.502,-47.042)
N7: (-18.006,10.303,-46.778)
N9: (-18.373,8.181,-47.418)
O5': (-21.744,8.577,-50.544)
O3': (-22.504,6.214,-47.081)
OP2: (-22.424,10.947,-50.323)
C3': (-21.347,7.017,-47.228)
C1': (-19.050,6.927,-47.805)
C5': (-21.921,8.406,-49.178)
O4': (-19.781,7.209,-49.005)
C8: (-18.884,9.328,-46.860)
O2': (-20.083,4.968,-46.981)
C6: (-15.531,10.272,-47.459)
C5: (-16.834,9.754,-47.284)
C4: (-17.043,8.436,-47.658)
P: (-21.659,10.031,-51.156)
C4': (-21.209,7.165,-48.727)
C2': (-20.048,6.359,-46.788)
C2: (-14.950,8.228,-48.356)
N1: (-14.615,9.480,-48.033)
N3: (-16.140,7.603,-48.191)
N6: (-15.150,11.502,-47.042)
N7: (-18.006,10.303,-46.778)
N9: (-18.373,8.181,-47.418)
O5': (-21.744,8.577,-50.544)
O3': (-22.504,6.214,-47.081)
Image (generated by PyMOL):