ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1M5V:B22:B58

Extra

PDB:
ATOM 1 O3' A A 21 88.268 12.154 46.512 1.00 74.84 O
ATOM 2 P A A 22 86.957 13.052 46.748 1.00 79.07 P
ATOM 3 OP1 A A 22 86.238 12.529 47.936 1.00 75.06 O
ATOM 4 OP2 A A 22 86.250 13.145 45.443 1.00 69.54 O
ATOM 5 O5' A A 22 87.535 14.495 47.091 1.00 71.30 O
ATOM 6 C5' A A 22 88.474 14.676 48.141 1.00 71.04 C
ATOM 7 C4' A A 22 89.150 16.024 48.013 1.00 72.83 C
ATOM 8 O4' A A 22 89.931 16.061 46.788 1.00 73.49 O
ATOM 9 C3' A A 22 88.235 17.230 47.878 1.00 70.22 C
ATOM 10 O3' A A 22 87.729 17.667 49.133 1.00 75.59 O
ATOM 11 C2' A A 22 89.175 18.260 47.266 1.00 72.69 C
ATOM 12 O2' A A 22 90.041 18.851 48.212 1.00 74.36 O
ATOM 13 C1' A A 22 89.979 17.394 46.297 1.00 70.37 C
ATOM 14 N9 A A 22 89.405 17.419 44.953 1.00 72.17 N
ATOM 15 C8 A A 22 88.686 16.439 44.317 1.00 71.31 C
ATOM 16 N7 A A 22 88.283 16.775 43.116 1.00 71.37 N
ATOM 17 C5 A A 22 88.774 18.061 42.947 1.00 71.72 C
ATOM 18 C6 A A 22 88.689 18.975 41.881 1.00 71.74 C
ATOM 19 N6 A A 22 88.048 18.721 40.738 1.00 71.57 N
ATOM 20 N1 A A 22 89.291 20.174 42.032 1.00 71.45 N
ATOM 21 C2 A A 22 89.930 20.428 43.181 1.00 72.46 C
ATOM 22 N3 A A 22 90.078 19.653 44.253 1.00 71.69 N
ATOM 23 C4 A A 22 89.470 18.469 44.069 1.00 71.57 C
ATOM 24 P A A 23 86.418 18.598 49.179 1.00 72.78 P
ATOM 25 OP1 A A 23 86.180 19.024 50.582 1.00 70.65 O
ATOM 26 OP2 A A 23 85.341 17.909 48.429 1.00 65.92 O
ATOM 27 O5' A A 23 86.837 19.882 48.340 1.00 72.33 O
TER

ATOM 1 O3' U B 57 84.543 8.474 35.699 1.00 77.20 O
ATOM 2 P A B 58 85.877 9.338 35.930 1.00 69.50 P
ATOM 3 OP1 A B 58 86.889 8.841 34.966 1.00 75.86 O
ATOM 4 OP2 A B 58 86.181 9.322 37.388 1.00 64.39 O
ATOM 5 O5' A B 58 85.476 10.818 35.500 1.00 65.89 O
ATOM 6 C5' A B 58 84.799 11.075 34.273 1.00 62.34 C
ATOM 7 C4' A B 58 84.658 12.564 34.073 1.00 59.16 C
ATOM 8 O4' A B 58 83.989 13.121 35.235 1.00 61.29 O
ATOM 9 C3' A B 58 85.979 13.312 33.989 1.00 65.73 C
ATOM 10 O3' A B 58 86.402 13.384 32.634 1.00 68.34 O
ATOM 11 C2' A B 58 85.605 14.686 34.520 1.00 55.86 C
ATOM 12 O2' A B 58 84.908 15.440 33.552 1.00 64.24 O
ATOM 13 C1' A B 58 84.633 14.316 35.636 1.00 58.60 C
ATOM 14 N9 A B 58 85.248 14.072 36.940 1.00 57.04 N
ATOM 15 C8 A B 58 85.422 12.856 37.551 1.00 56.42 C
ATOM 16 N7 A B 58 85.947 12.935 38.751 1.00 58.85 N
ATOM 17 C5 A B 58 86.145 14.294 38.938 1.00 57.71 C
ATOM 18 C6 A B 58 86.665 15.029 40.012 1.00 58.74 C
ATOM 19 N6 A B 58 87.095 14.475 41.147 1.00 57.25 N
ATOM 20 N1 A B 58 86.730 16.373 39.881 1.00 62.05 N
ATOM 21 C2 A B 58 86.296 16.926 38.743 1.00 62.21 C
ATOM 22 N3 A B 58 85.782 16.340 37.662 1.00 62.98 N
ATOM 23 C4 A B 58 85.732 15.007 37.825 1.00 59.59 C
ATOM 24 P U B 59 87.963 13.275 32.277 1.00 77.11 P
ATOM 25 OP1 U B 59 88.082 13.526 30.813 1.00 61.02 O
ATOM 26 OP2 U B 59 88.455 11.994 32.847 1.00 67.83 O
ATOM 27 O5' U B 59 88.622 14.496 33.067 1.00 65.01 O
TER

Atoms:
OP1: (86.238,12.529,47.936)
OP2: (86.250,13.145,45.443)
C3': (88.235,17.230,47.878)
C1': (89.979,17.394,46.297)
C5': (88.474,14.676,48.141)
O4': (89.931,16.061,46.788)
C8: (88.686,16.439,44.317)
O2': (90.041,18.851,48.212)
C6: (88.689,18.975,41.881)
C5: (88.774,18.061,42.947)
C4: (89.470,18.469,44.069)
P: (86.957,13.052,46.748)
C4': (89.150,16.024,48.013)
C2': (89.175,18.260,47.266)
C2: (89.930,20.428,43.181)
N1: (89.291,20.174,42.032)
N3: (90.078,19.653,44.253)
N6: (88.048,18.721,40.738)
N7: (88.283,16.775,43.116)
N9: (89.405,17.419,44.953)
O5': (87.535,14.495,47.091)
O3': (87.729,17.667,49.133)
OP1: (86.889,8.841,34.966)
OP2: (86.181,9.322,37.388)
C3': (85.979,13.312,33.989)
C1': (84.633,14.316,35.636)
C5': (84.799,11.075,34.273)
O4': (83.989,13.121,35.235)
C8: (85.422,12.856,37.551)
O2': (84.908,15.440,33.552)
C6: (86.665,15.029,40.012)
C5: (86.145,14.294,38.938)
C4: (85.732,15.007,37.825)
P: (85.877,9.338,35.930)
C4': (84.658,12.564,34.073)
C2': (85.605,14.686,34.520)
C2: (86.296,16.926,38.743)
N1: (86.730,16.373,39.881)
N3: (85.782,16.340,37.662)
N6: (87.095,14.475,41.147)
N7: (85.947,12.935,38.751)
N9: (85.248,14.072,36.940)
O5': (85.476,10.818,35.500)
O3': (86.402,13.384,32.634)
Image (generated by PyMOL):
PyMOL image
show in jmol