ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:1356:1759

Extra

PDB:
ATOM 1 O3' G A 355 40.969 11.915 102.624 1.00 42.13 O
ATOM 2 P U A 356 40.270 12.977 103.597 1.00 40.89 P
ATOM 3 OP1 U A 356 38.809 12.814 103.444 1.00 40.81 O
ATOM 4 OP2 U A 356 40.833 14.270 103.304 1.00 41.02 O
ATOM 5 O5' U A 356 40.716 12.479 105.035 1.00 41.18 O
ATOM 6 C5' U A 356 40.433 13.239 106.208 1.00 41.59 C
ATOM 7 C4' U A 356 39.889 12.384 107.323 1.00 41.76 C
ATOM 8 O4' U A 356 38.553 11.974 106.981 1.00 41.59 O
ATOM 9 C3' U A 356 40.604 11.079 107.593 1.00 41.65 C
ATOM 10 O3' U A 356 41.785 11.220 108.385 1.00 41.91 O
ATOM 11 C2' U A 356 39.511 10.229 108.252 1.00 41.70 C
ATOM 12 O2' U A 356 39.377 10.542 109.623 1.00 42.13 O
ATOM 13 C1' U A 356 38.264 10.723 107.549 1.00 41.57 C
ATOM 14 N1 U A 356 37.821 9.817 106.494 1.00 41.16 N
ATOM 15 C2 U A 356 37.121 8.679 106.852 1.00 41.11 C
ATOM 16 O2 U A 356 36.881 8.357 107.983 1.00 41.37 O
ATOM 17 N3 U A 356 36.699 7.890 105.859 1.00 40.76 N
ATOM 18 C4 U A 356 36.923 8.165 104.570 1.00 40.46 C
ATOM 19 O4 U A 356 36.513 7.379 103.786 1.00 40.18 O
ATOM 20 C5 U A 356 37.626 9.349 104.254 1.00 40.53 C
ATOM 21 C6 U A 356 38.043 10.149 105.210 1.00 40.88 C
ATOM 22 P G A 357 43.133 10.328 108.062 1.00 41.99 P
ATOM 23 OP1 G A 357 44.155 10.709 109.078 1.00 42.35 O
ATOM 24 OP2 G A 357 43.459 10.484 106.605 1.00 41.62 O
ATOM 25 O5' G A 357 42.667 8.837 108.340 1.00 41.86 O
TER

ATOM 1 O3' U B 758 38.759 2.212 110.513 1.00 40.97 O
ATOM 2 P G B 759 37.477 2.998 111.105 1.00 38.14 P
ATOM 3 OP1 G B 759 37.999 3.890 112.203 1.00 38.55 O
ATOM 4 OP2 G B 759 36.451 2.013 111.439 1.00 38.15 O
ATOM 5 O5' G B 759 37.002 3.858 109.870 1.00 37.87 O
ATOM 6 C5' G B 759 35.748 4.472 109.868 1.00 37.93 C
ATOM 7 C4' G B 759 35.428 5.042 108.518 1.00 37.62 C
ATOM 8 O4' G B 759 35.640 4.036 107.497 1.00 37.24 O
ATOM 9 C3' G B 759 33.990 5.475 108.325 1.00 37.62 C
ATOM 10 O3' G B 759 33.772 6.759 108.799 1.00 37.90 O
ATOM 11 C2' G B 759 33.781 5.359 106.844 1.00 37.22 C
ATOM 12 O2' G B 759 34.349 6.485 106.206 1.00 37.17 O
ATOM 13 C1' G B 759 34.623 4.126 106.518 1.00 37.00 C
ATOM 14 N9 G B 759 33.846 2.867 106.569 1.00 36.91 N
ATOM 15 C8 G B 759 34.095 1.884 107.517 1.00 37.06 C
ATOM 16 N7 G B 759 33.343 0.837 107.382 1.00 36.95 N
ATOM 17 C5 G B 759 32.551 1.147 106.270 1.00 36.70 C
ATOM 18 C6 G B 759 31.578 0.372 105.631 1.00 36.51 C
ATOM 19 O6 G B 759 31.191 -0.760 105.935 1.00 36.51 O
ATOM 20 N1 G B 759 31.042 0.995 104.555 1.00 36.30 N
ATOM 21 C2 G B 759 31.406 2.199 104.113 1.00 36.28 C
ATOM 22 N2 G B 759 30.749 2.597 103.043 1.00 36.09 N
ATOM 23 N3 G B 759 32.339 2.954 104.648 1.00 36.46 N
ATOM 24 C4 G B 759 32.863 2.368 105.737 1.00 36.67 C
ATOM 25 P A B 760 32.664 6.988 109.894 1.00 37.24 P
ATOM 26 OP1 A B 760 32.935 8.333 110.487 1.00 37.57 O
ATOM 27 OP2 A B 760 32.637 5.809 110.761 1.00 37.35 O
ATOM 28 O5' A B 760 31.352 6.993 109.046 1.00 37.03 O
TER

Atoms:
C4: (36.923,8.165,104.570)
N3: (36.699,7.890,105.859)
OP1: (38.809,12.814,103.444)
OP2: (40.833,14.270,103.304)
C2: (37.121,8.679,106.852)
C1': (38.264,10.723,107.549)
C3': (40.604,11.079,107.593)
O5': (40.716,12.479,105.035)
O4': (38.553,11.974,106.981)
C5': (40.433,13.239,106.208)
P: (40.270,12.977,103.597)
C4': (39.889,12.384,107.323)
C2': (39.511,10.229,108.252)
O2': (39.377,10.542,109.623)
N1: (37.821,9.817,106.494)
O4: (36.513,7.379,103.786)
O2: (36.881,8.357,107.983)
C6: (38.043,10.149,105.210)
C5: (37.626,9.349,104.254)
O3': (41.785,11.220,108.385)
OP1: (37.999,3.890,112.203)
OP2: (36.451,2.013,111.439)
C3': (33.990,5.475,108.325)
C1': (34.623,4.126,106.518)
C5': (35.748,4.472,109.868)
O6: (31.191,-0.760,105.935)
O4': (35.640,4.036,107.497)
C8: (34.095,1.884,107.517)
C2: (31.406,2.199,104.113)
C6: (31.578,0.372,105.631)
C5: (32.551,1.147,106.270)
C4: (32.863,2.368,105.737)
P: (37.477,2.998,111.105)
C4': (35.428,5.042,108.518)
C2': (33.781,5.359,106.844)
O2': (34.349,6.485,106.206)
N1: (31.042,0.995,104.555)
N2: (30.749,2.597,103.043)
N3: (32.339,2.954,104.648)
N7: (33.343,0.837,107.382)
N9: (33.846,2.867,106.569)
O5': (37.002,3.858,109.870)
O3': (33.772,6.759,108.799)
Image (generated by PyMOL):
PyMOL image
show in jmol