ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1E:A1215:A1275

Extra

PDB:
ATOM 1 O3' A A1214 -99.337 136.127 79.325 1.00 95.04 O
ATOM 2 P A A1215 -99.009 137.631 78.899 1.00112.82 P
ATOM 3 OP1 A A1215 -97.646 137.645 78.341 1.00109.42 O
ATOM 4 OP2 A A1215 -99.336 138.511 80.046 1.00101.04 O
ATOM 5 O5' A A1215 -100.065 137.924 77.730 1.00116.55 O
ATOM 6 C5' A A1215 -99.854 139.021 76.855 1.00107.00 C
ATOM 7 C4' A A1215 -101.124 139.480 76.156 1.00104.83 C
ATOM 8 O4' A A1215 -102.312 139.198 76.943 1.00101.91 O
ATOM 9 C3' A A1215 -101.145 140.983 75.891 1.00104.61 C
ATOM 10 O3' A A1215 -101.443 141.215 74.533 1.00103.93 O
ATOM 11 C2' A A1215 -102.213 141.540 76.826 1.00 97.00 C
ATOM 12 O2' A A1215 -102.872 142.653 76.258 1.00 94.21 O
ATOM 13 C1' A A1215 -103.149 140.343 76.951 1.00 99.28 C
ATOM 14 N9 A A1215 -103.973 140.350 78.163 1.00 99.08 N
ATOM 15 C8 A A1215 -103.753 139.648 79.313 1.00103.21 C
ATOM 16 N7 A A1215 -104.659 139.844 80.243 1.00104.78 N
ATOM 17 C5 A A1215 -105.544 140.736 79.665 1.00110.00 C
ATOM 18 C6 A A1215 -106.730 141.345 80.135 1.00109.31 C
ATOM 19 N6 A A1215 -107.244 141.128 81.351 1.00110.01 N
ATOM 20 N1 A A1215 -107.376 142.190 79.305 1.00109.61 N
ATOM 21 C2 A A1215 -106.867 142.409 78.086 1.00110.45 C
ATOM 22 N3 A A1215 -105.764 141.899 77.535 1.00110.82 N
ATOM 23 C4 A A1215 -105.139 141.059 78.381 1.00110.03 C
ATOM 24 P U A1216 -100.212 141.367 73.534 1.00132.98 P
ATOM 25 OP1 U A1216 -99.011 141.630 74.357 1.00131.14 O
ATOM 26 OP2 U A1216 -100.608 142.325 72.475 1.00107.26 O
ATOM 27 O5' U A1216 -100.074 139.904 72.905 1.00113.46 O
TER

ATOM 1 O3' C B1274 -102.656 143.193 87.728 1.00117.97 O
ATOM 2 P A B1275 -101.617 143.450 88.912 1.00134.14 P
ATOM 3 OP1 A B1275 -101.637 144.903 89.201 1.00109.31 O
ATOM 4 OP2 A B1275 -100.350 142.772 88.544 1.00110.62 O
ATOM 5 O5' A B1275 -102.270 142.644 90.136 1.00102.35 O
ATOM 6 C5' A B1275 -103.466 143.113 90.757 1.00107.59 C
ATOM 7 C4' A B1275 -104.577 142.074 90.712 1.00109.44 C
ATOM 8 O4' A B1275 -105.197 142.089 89.403 1.00107.31 O
ATOM 9 C3' A B1275 -104.147 140.634 90.957 1.00107.34 C
ATOM 10 O3' A B1275 -104.258 140.330 92.354 1.00113.32 O
ATOM 11 C2' A B1275 -105.136 139.824 90.114 1.00110.10 C
ATOM 12 O2' A B1275 -106.259 139.394 90.859 1.00 99.50 O
ATOM 13 C1' A B1275 -105.586 140.788 89.013 1.00108.66 C
ATOM 14 N9 A B1275 -104.992 140.520 87.705 1.00110.64 N
ATOM 15 C8 A B1275 -103.667 140.309 87.443 1.00114.67 C
ATOM 16 N7 A B1275 -103.401 140.093 86.176 1.00113.92 N
ATOM 17 C5 A B1275 -104.638 140.168 85.556 1.00107.69 C
ATOM 18 C6 A B1275 -105.031 140.028 84.207 1.00 98.12 C
ATOM 19 N6 A B1275 -104.179 139.773 83.207 1.00 90.59 N
ATOM 20 N1 A B1275 -106.342 140.162 83.927 1.00109.08 N
ATOM 21 C2 A B1275 -107.193 140.418 84.930 1.00114.29 C
ATOM 22 N3 A B1275 -106.944 140.571 86.232 1.00121.56 N
ATOM 23 C4 A B1275 -105.632 140.433 86.484 1.00114.33 C
ATOM 24 P G B1276 -102.947 140.073 93.241 1.00134.05 P
ATOM 25 OP1 G B1276 -103.176 140.578 94.613 1.00112.11 O
ATOM 26 OP2 G B1276 -101.798 140.580 92.464 1.00108.21 O
ATOM 27 O5' G B1276 -102.864 138.475 93.287 1.00126.38 O
TER

Atoms:
OP1: (-97.646,137.645,78.341)
OP2: (-99.336,138.511,80.046)
C3': (-101.145,140.983,75.891)
C1': (-103.149,140.343,76.951)
C5': (-99.854,139.021,76.855)
O4': (-102.312,139.198,76.943)
C8: (-103.753,139.648,79.313)
O2': (-102.872,142.653,76.258)
C6: (-106.730,141.345,80.135)
C5: (-105.544,140.736,79.665)
C4: (-105.139,141.059,78.381)
P: (-99.009,137.631,78.899)
C4': (-101.124,139.480,76.156)
C2': (-102.213,141.540,76.826)
C2: (-106.867,142.409,78.086)
N1: (-107.376,142.190,79.305)
N3: (-105.764,141.899,77.535)
N6: (-107.244,141.128,81.351)
N7: (-104.659,139.844,80.243)
N9: (-103.973,140.350,78.163)
O5': (-100.065,137.924,77.730)
O3': (-101.443,141.215,74.533)
OP1: (-101.637,144.903,89.201)
OP2: (-100.350,142.772,88.544)
C3': (-104.147,140.634,90.957)
C1': (-105.586,140.788,89.013)
C5': (-103.466,143.113,90.757)
O4': (-105.197,142.089,89.403)
C8: (-103.667,140.309,87.443)
O2': (-106.259,139.394,90.859)
C6: (-105.031,140.028,84.207)
C5: (-104.638,140.168,85.556)
C4: (-105.632,140.433,86.484)
P: (-101.617,143.450,88.912)
C4': (-104.577,142.074,90.712)
C2': (-105.136,139.824,90.114)
C2: (-107.193,140.418,84.930)
N1: (-106.342,140.162,83.927)
N3: (-106.944,140.571,86.232)
N6: (-104.179,139.773,83.207)
N7: (-103.401,140.093,86.176)
N9: (-104.992,140.520,87.705)
O5': (-102.270,142.644,90.136)
O3': (-104.258,140.330,92.354)
Image (generated by PyMOL):
PyMOL image
show in jmol