Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DJ2:A41:A49
Extra
PDB:
ATOM 1 O3' C A 40 -3.589 55.543 1.780 1.00 31.07 O
ATOM 2 P A A 41 -3.577 54.112 2.483 1.00 29.89 P
ATOM 3 OP1 A A 41 -2.256 53.496 2.220 1.00 30.27 O
ATOM 4 OP2 A A 41 -4.816 53.387 2.112 1.00 29.73 O
ATOM 5 O5' A A 41 -3.705 54.529 4.024 1.00 28.32 O
ATOM 6 C5' A A 41 -2.559 54.816 4.812 1.00 25.63 C
ATOM 7 C4' A A 41 -2.576 53.925 6.037 1.00 24.03 C
ATOM 8 O4' A A 41 -3.852 54.054 6.719 1.00 23.21 O
ATOM 9 C3' A A 41 -2.410 52.435 5.743 1.00 23.32 C
ATOM 10 O3' A A 41 -1.403 51.883 6.588 1.00 23.66 O
ATOM 11 C2' A A 41 -3.795 51.861 6.036 1.00 22.61 C
ATOM 12 O2' A A 41 -3.766 50.522 6.472 1.00 22.56 O
ATOM 13 C1' A A 41 -4.246 52.775 7.166 1.00 21.77 C
ATOM 14 N9 A A 41 -5.685 52.763 7.436 1.00 21.32 N
ATOM 15 C8 A A 41 -6.702 52.784 6.518 1.00 21.08 C
ATOM 16 N7 A A 41 -7.901 52.765 7.049 1.00 20.82 N
ATOM 17 C5 A A 41 -7.657 52.731 8.412 1.00 20.75 C
ATOM 18 C6 A A 41 -8.516 52.699 9.532 1.00 20.89 C
ATOM 19 N6 A A 41 -9.847 52.699 9.425 1.00 21.11 N
ATOM 20 N1 A A 41 -7.960 52.672 10.765 1.00 20.57 N
ATOM 21 C2 A A 41 -6.626 52.678 10.862 1.00 20.25 C
ATOM 22 N3 A A 41 -5.718 52.706 9.883 1.00 20.52 N
ATOM 23 C4 A A 41 -6.299 52.732 8.670 1.00 20.67 C
ATOM 24 P G A 42 0.143 52.056 6.213 1.00 23.58 P
ATOM 25 OP1 G A 42 0.598 53.368 6.730 1.00 24.46 O
ATOM 26 OP2 G A 42 0.298 51.729 4.778 1.00 23.41 O
ATOM 27 O5' G A 42 0.854 50.900 7.053 1.00 24.04 O
TER
ATOM 1 O3' G B 48 -15.639 47.904 0.166 1.00 27.23 O
ATOM 2 P A B 49 -16.116 49.434 0.205 1.00 27.07 P
ATOM 3 OP1 A B 49 -17.403 49.524 -0.523 1.00 26.30 O
ATOM 4 OP2 A B 49 -14.996 50.316 -0.200 1.00 26.82 O
ATOM 5 O5' A B 49 -16.366 49.630 1.774 1.00 26.51 O
ATOM 6 C5' A B 49 -17.319 48.802 2.437 1.00 26.22 C
ATOM 7 C4' A B 49 -17.255 48.960 3.943 1.00 25.85 C
ATOM 8 O4' A B 49 -15.991 48.454 4.437 1.00 25.59 O
ATOM 9 C3' A B 49 -17.306 50.392 4.451 1.00 25.71 C
ATOM 10 O3' A B 49 -18.640 50.849 4.548 1.00 25.30 O
ATOM 11 C2' A B 49 -16.658 50.256 5.820 1.00 25.56 C
ATOM 12 O2' A B 49 -17.550 49.729 6.783 1.00 25.96 O
ATOM 13 C1' A B 49 -15.542 49.262 5.513 1.00 25.01 C
ATOM 14 N9 A B 49 -14.264 49.888 5.161 1.00 24.80 N
ATOM 15 C8 A B 49 -13.704 50.006 3.916 1.00 24.68 C
ATOM 16 N7 A B 49 -12.541 50.612 3.905 1.00 24.40 N
ATOM 17 C5 A B 49 -12.319 50.914 5.237 1.00 24.43 C
ATOM 18 C6 A B 49 -11.256 51.558 5.902 1.00 24.33 C
ATOM 19 N6 A B 49 -10.180 52.033 5.272 1.00 24.55 N
ATOM 20 N1 A B 49 -11.341 51.701 7.243 1.00 24.21 N
ATOM 21 C2 A B 49 -12.424 51.226 7.876 1.00 24.30 C
ATOM 22 N3 A B 49 -13.485 50.601 7.360 1.00 24.34 N
ATOM 23 C4 A B 49 -13.369 50.474 6.026 1.00 24.51 C
ATOM 24 P A B 50 -18.954 52.358 4.126 1.00 25.79 P
ATOM 25 OP1 A B 50 -20.418 52.552 4.225 1.00 25.77 O
ATOM 26 OP2 A B 50 -18.277 52.643 2.840 1.00 25.51 O
ATOM 27 O5' A B 50 -18.203 53.209 5.261 1.00 25.99 O
TER
ATOM 2 P A A 41 -3.577 54.112 2.483 1.00 29.89 P
ATOM 3 OP1 A A 41 -2.256 53.496 2.220 1.00 30.27 O
ATOM 4 OP2 A A 41 -4.816 53.387 2.112 1.00 29.73 O
ATOM 5 O5' A A 41 -3.705 54.529 4.024 1.00 28.32 O
ATOM 6 C5' A A 41 -2.559 54.816 4.812 1.00 25.63 C
ATOM 7 C4' A A 41 -2.576 53.925 6.037 1.00 24.03 C
ATOM 8 O4' A A 41 -3.852 54.054 6.719 1.00 23.21 O
ATOM 9 C3' A A 41 -2.410 52.435 5.743 1.00 23.32 C
ATOM 10 O3' A A 41 -1.403 51.883 6.588 1.00 23.66 O
ATOM 11 C2' A A 41 -3.795 51.861 6.036 1.00 22.61 C
ATOM 12 O2' A A 41 -3.766 50.522 6.472 1.00 22.56 O
ATOM 13 C1' A A 41 -4.246 52.775 7.166 1.00 21.77 C
ATOM 14 N9 A A 41 -5.685 52.763 7.436 1.00 21.32 N
ATOM 15 C8 A A 41 -6.702 52.784 6.518 1.00 21.08 C
ATOM 16 N7 A A 41 -7.901 52.765 7.049 1.00 20.82 N
ATOM 17 C5 A A 41 -7.657 52.731 8.412 1.00 20.75 C
ATOM 18 C6 A A 41 -8.516 52.699 9.532 1.00 20.89 C
ATOM 19 N6 A A 41 -9.847 52.699 9.425 1.00 21.11 N
ATOM 20 N1 A A 41 -7.960 52.672 10.765 1.00 20.57 N
ATOM 21 C2 A A 41 -6.626 52.678 10.862 1.00 20.25 C
ATOM 22 N3 A A 41 -5.718 52.706 9.883 1.00 20.52 N
ATOM 23 C4 A A 41 -6.299 52.732 8.670 1.00 20.67 C
ATOM 24 P G A 42 0.143 52.056 6.213 1.00 23.58 P
ATOM 25 OP1 G A 42 0.598 53.368 6.730 1.00 24.46 O
ATOM 26 OP2 G A 42 0.298 51.729 4.778 1.00 23.41 O
ATOM 27 O5' G A 42 0.854 50.900 7.053 1.00 24.04 O
TER
ATOM 1 O3' G B 48 -15.639 47.904 0.166 1.00 27.23 O
ATOM 2 P A B 49 -16.116 49.434 0.205 1.00 27.07 P
ATOM 3 OP1 A B 49 -17.403 49.524 -0.523 1.00 26.30 O
ATOM 4 OP2 A B 49 -14.996 50.316 -0.200 1.00 26.82 O
ATOM 5 O5' A B 49 -16.366 49.630 1.774 1.00 26.51 O
ATOM 6 C5' A B 49 -17.319 48.802 2.437 1.00 26.22 C
ATOM 7 C4' A B 49 -17.255 48.960 3.943 1.00 25.85 C
ATOM 8 O4' A B 49 -15.991 48.454 4.437 1.00 25.59 O
ATOM 9 C3' A B 49 -17.306 50.392 4.451 1.00 25.71 C
ATOM 10 O3' A B 49 -18.640 50.849 4.548 1.00 25.30 O
ATOM 11 C2' A B 49 -16.658 50.256 5.820 1.00 25.56 C
ATOM 12 O2' A B 49 -17.550 49.729 6.783 1.00 25.96 O
ATOM 13 C1' A B 49 -15.542 49.262 5.513 1.00 25.01 C
ATOM 14 N9 A B 49 -14.264 49.888 5.161 1.00 24.80 N
ATOM 15 C8 A B 49 -13.704 50.006 3.916 1.00 24.68 C
ATOM 16 N7 A B 49 -12.541 50.612 3.905 1.00 24.40 N
ATOM 17 C5 A B 49 -12.319 50.914 5.237 1.00 24.43 C
ATOM 18 C6 A B 49 -11.256 51.558 5.902 1.00 24.33 C
ATOM 19 N6 A B 49 -10.180 52.033 5.272 1.00 24.55 N
ATOM 20 N1 A B 49 -11.341 51.701 7.243 1.00 24.21 N
ATOM 21 C2 A B 49 -12.424 51.226 7.876 1.00 24.30 C
ATOM 22 N3 A B 49 -13.485 50.601 7.360 1.00 24.34 N
ATOM 23 C4 A B 49 -13.369 50.474 6.026 1.00 24.51 C
ATOM 24 P A B 50 -18.954 52.358 4.126 1.00 25.79 P
ATOM 25 OP1 A B 50 -20.418 52.552 4.225 1.00 25.77 O
ATOM 26 OP2 A B 50 -18.277 52.643 2.840 1.00 25.51 O
ATOM 27 O5' A B 50 -18.203 53.209 5.261 1.00 25.99 O
TER
Atoms:
OP1: (-2.256,53.496,2.220)
OP2: (-4.816,53.387,2.112)
C3': (-2.410,52.435,5.743)
C1': (-4.246,52.775,7.166)
C5': (-2.559,54.816,4.812)
O4': (-3.852,54.054,6.719)
C8: (-6.702,52.784,6.518)
O2': (-3.766,50.522,6.472)
C6: (-8.516,52.699,9.532)
C5: (-7.657,52.731,8.412)
C4: (-6.299,52.732,8.670)
P: (-3.577,54.112,2.483)
C4': (-2.576,53.925,6.037)
C2': (-3.795,51.861,6.036)
C2: (-6.626,52.678,10.862)
N1: (-7.960,52.672,10.765)
N3: (-5.718,52.706,9.883)
N6: (-9.847,52.699,9.425)
N7: (-7.901,52.765,7.049)
N9: (-5.685,52.763,7.436)
O5': (-3.705,54.529,4.024)
O3': (-1.403,51.883,6.588)
OP2: (-4.816,53.387,2.112)
C3': (-2.410,52.435,5.743)
C1': (-4.246,52.775,7.166)
C5': (-2.559,54.816,4.812)
O4': (-3.852,54.054,6.719)
C8: (-6.702,52.784,6.518)
O2': (-3.766,50.522,6.472)
C6: (-8.516,52.699,9.532)
C5: (-7.657,52.731,8.412)
C4: (-6.299,52.732,8.670)
P: (-3.577,54.112,2.483)
C4': (-2.576,53.925,6.037)
C2': (-3.795,51.861,6.036)
C2: (-6.626,52.678,10.862)
N1: (-7.960,52.672,10.765)
N3: (-5.718,52.706,9.883)
N6: (-9.847,52.699,9.425)
N7: (-7.901,52.765,7.049)
N9: (-5.685,52.763,7.436)
O5': (-3.705,54.529,4.024)
O3': (-1.403,51.883,6.588)
OP1: (-17.403,49.524,-0.523)
OP2: (-14.996,50.316,-0.200)
C3': (-17.306,50.392,4.451)
C1': (-15.542,49.262,5.513)
C5': (-17.319,48.802,2.437)
O4': (-15.991,48.454,4.437)
C8: (-13.704,50.006,3.916)
O2': (-17.550,49.729,6.783)
C6: (-11.256,51.558,5.902)
C5: (-12.319,50.914,5.237)
C4: (-13.369,50.474,6.026)
P: (-16.116,49.434,0.205)
C4': (-17.255,48.960,3.943)
C2': (-16.658,50.256,5.820)
C2: (-12.424,51.226,7.876)
N1: (-11.341,51.701,7.243)
N3: (-13.485,50.601,7.360)
N6: (-10.180,52.033,5.272)
N7: (-12.541,50.612,3.905)
N9: (-14.264,49.888,5.161)
O5': (-16.366,49.630,1.774)
O3': (-18.640,50.849,4.548)
OP2: (-14.996,50.316,-0.200)
C3': (-17.306,50.392,4.451)
C1': (-15.542,49.262,5.513)
C5': (-17.319,48.802,2.437)
O4': (-15.991,48.454,4.437)
C8: (-13.704,50.006,3.916)
O2': (-17.550,49.729,6.783)
C6: (-11.256,51.558,5.902)
C5: (-12.319,50.914,5.237)
C4: (-13.369,50.474,6.026)
P: (-16.116,49.434,0.205)
C4': (-17.255,48.960,3.943)
C2': (-16.658,50.256,5.820)
C2: (-12.424,51.226,7.876)
N1: (-11.341,51.701,7.243)
N3: (-13.485,50.601,7.360)
N6: (-10.180,52.033,5.272)
N7: (-12.541,50.612,3.905)
N9: (-14.264,49.888,5.161)
O5': (-16.366,49.630,1.774)
O3': (-18.640,50.849,4.548)
Image (generated by PyMOL):