Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0754:0882
Extra
PDB:
ATOM 1 O3' A A 753 64.828 121.059 74.995 1.00 25.81 O
ATOM 2 P A A 754 65.323 122.577 75.141 1.00 26.34 P
ATOM 3 OP1 A A 754 64.807 123.121 76.423 1.00 26.31 O
ATOM 4 OP2 A A 754 65.023 123.282 73.870 1.00 27.93 O
ATOM 5 O5' A A 754 66.892 122.431 75.286 1.00 22.36 O
ATOM 6 C5' A A 754 67.680 122.011 74.179 1.00 22.33 C
ATOM 7 C4' A A 754 68.620 120.936 74.613 1.00 22.98 C
ATOM 8 O4' A A 754 67.897 119.686 74.716 1.00 24.99 O
ATOM 9 C3' A A 754 69.706 120.597 73.626 1.00 23.20 C
ATOM 10 O3' A A 754 70.751 121.539 73.670 1.00 23.00 O
ATOM 11 C2' A A 754 70.141 119.220 74.097 1.00 24.47 C
ATOM 12 O2' A A 754 70.986 119.252 75.227 1.00 26.09 O
ATOM 13 C1' A A 754 68.791 118.610 74.476 1.00 25.35 C
ATOM 14 N9 A A 754 68.262 117.790 73.391 1.00 25.45 N
ATOM 15 C8 A A 754 67.547 118.179 72.286 1.00 25.03 C
ATOM 16 N7 A A 754 67.267 117.197 71.467 1.00 25.81 N
ATOM 17 C5 A A 754 67.827 116.085 72.079 1.00 26.74 C
ATOM 18 C6 A A 754 67.891 114.739 71.709 1.00 26.69 C
ATOM 19 N6 A A 754 67.385 114.264 70.568 1.00 26.17 N
ATOM 20 N1 A A 754 68.509 113.883 72.556 1.00 26.25 N
ATOM 21 C2 A A 754 69.040 114.365 73.685 1.00 24.80 C
ATOM 22 N3 A A 754 69.061 115.612 74.133 1.00 26.81 N
ATOM 23 C4 A A 754 68.429 116.434 73.274 1.00 26.38 C
ATOM 24 P U A 755 71.532 121.886 72.325 1.00 28.04 P
ATOM 25 OP1 U A 755 72.738 122.686 72.688 1.00 27.98 O
ATOM 26 OP2 U A 755 70.558 122.422 71.331 1.00 24.86 O
ATOM 27 O5' U A 755 72.000 120.450 71.831 1.00 26.45 O
TER
ATOM 1 O3' A B 881 59.157 117.274 62.105 1.00 26.87 O
ATOM 2 P A B 882 60.418 117.537 63.062 1.00 28.44 P
ATOM 3 OP1 A B 882 59.904 117.610 64.457 1.00 28.47 O
ATOM 4 OP2 A B 882 61.211 118.659 62.515 1.00 29.76 O
ATOM 5 O5' A B 882 61.294 116.216 62.948 1.00 26.04 O
ATOM 6 C5' A B 882 61.776 115.756 61.683 1.00 24.29 C
ATOM 7 C4' A B 882 62.958 114.855 61.892 1.00 22.14 C
ATOM 8 O4' A B 882 64.040 115.630 62.453 1.00 23.83 O
ATOM 9 C3' A B 882 62.731 113.748 62.898 1.00 22.47 C
ATOM 10 O3' A B 882 62.114 112.646 62.247 1.00 25.00 O
ATOM 11 C2' A B 882 64.148 113.446 63.370 1.00 21.54 C
ATOM 12 O2' A B 882 64.870 112.677 62.435 1.00 23.33 O
ATOM 13 C1' A B 882 64.769 114.842 63.376 1.00 20.38 C
ATOM 14 N9 A B 882 64.788 115.537 64.666 1.00 16.58 N
ATOM 15 C8 A B 882 64.027 116.610 65.061 1.00 15.19 C
ATOM 16 N7 A B 882 64.286 117.022 66.276 1.00 15.25 N
ATOM 17 C5 A B 882 65.280 116.160 66.714 1.00 14.56 C
ATOM 18 C6 A B 882 65.977 116.064 67.923 1.00 14.59 C
ATOM 19 N6 A B 882 65.773 116.876 68.957 1.00 15.52 N
ATOM 20 N1 A B 882 66.904 115.094 68.039 1.00 13.57 N
ATOM 21 C2 A B 882 67.111 114.284 67.004 1.00 14.13 C
ATOM 22 N3 A B 882 66.521 114.272 65.816 1.00 15.68 N
ATOM 23 C4 A B 882 65.601 115.245 65.734 1.00 15.15 C
ATOM 24 P C B 883 60.867 111.894 62.931 1.00 25.79 P
ATOM 25 OP1 C B 883 60.393 110.922 61.910 1.00 27.06 O
ATOM 26 OP2 C B 883 59.918 112.908 63.475 1.00 20.19 O
ATOM 27 O5' C B 883 61.530 111.058 64.119 1.00 22.91 O
TER
ATOM 2 P A A 754 65.323 122.577 75.141 1.00 26.34 P
ATOM 3 OP1 A A 754 64.807 123.121 76.423 1.00 26.31 O
ATOM 4 OP2 A A 754 65.023 123.282 73.870 1.00 27.93 O
ATOM 5 O5' A A 754 66.892 122.431 75.286 1.00 22.36 O
ATOM 6 C5' A A 754 67.680 122.011 74.179 1.00 22.33 C
ATOM 7 C4' A A 754 68.620 120.936 74.613 1.00 22.98 C
ATOM 8 O4' A A 754 67.897 119.686 74.716 1.00 24.99 O
ATOM 9 C3' A A 754 69.706 120.597 73.626 1.00 23.20 C
ATOM 10 O3' A A 754 70.751 121.539 73.670 1.00 23.00 O
ATOM 11 C2' A A 754 70.141 119.220 74.097 1.00 24.47 C
ATOM 12 O2' A A 754 70.986 119.252 75.227 1.00 26.09 O
ATOM 13 C1' A A 754 68.791 118.610 74.476 1.00 25.35 C
ATOM 14 N9 A A 754 68.262 117.790 73.391 1.00 25.45 N
ATOM 15 C8 A A 754 67.547 118.179 72.286 1.00 25.03 C
ATOM 16 N7 A A 754 67.267 117.197 71.467 1.00 25.81 N
ATOM 17 C5 A A 754 67.827 116.085 72.079 1.00 26.74 C
ATOM 18 C6 A A 754 67.891 114.739 71.709 1.00 26.69 C
ATOM 19 N6 A A 754 67.385 114.264 70.568 1.00 26.17 N
ATOM 20 N1 A A 754 68.509 113.883 72.556 1.00 26.25 N
ATOM 21 C2 A A 754 69.040 114.365 73.685 1.00 24.80 C
ATOM 22 N3 A A 754 69.061 115.612 74.133 1.00 26.81 N
ATOM 23 C4 A A 754 68.429 116.434 73.274 1.00 26.38 C
ATOM 24 P U A 755 71.532 121.886 72.325 1.00 28.04 P
ATOM 25 OP1 U A 755 72.738 122.686 72.688 1.00 27.98 O
ATOM 26 OP2 U A 755 70.558 122.422 71.331 1.00 24.86 O
ATOM 27 O5' U A 755 72.000 120.450 71.831 1.00 26.45 O
TER
ATOM 1 O3' A B 881 59.157 117.274 62.105 1.00 26.87 O
ATOM 2 P A B 882 60.418 117.537 63.062 1.00 28.44 P
ATOM 3 OP1 A B 882 59.904 117.610 64.457 1.00 28.47 O
ATOM 4 OP2 A B 882 61.211 118.659 62.515 1.00 29.76 O
ATOM 5 O5' A B 882 61.294 116.216 62.948 1.00 26.04 O
ATOM 6 C5' A B 882 61.776 115.756 61.683 1.00 24.29 C
ATOM 7 C4' A B 882 62.958 114.855 61.892 1.00 22.14 C
ATOM 8 O4' A B 882 64.040 115.630 62.453 1.00 23.83 O
ATOM 9 C3' A B 882 62.731 113.748 62.898 1.00 22.47 C
ATOM 10 O3' A B 882 62.114 112.646 62.247 1.00 25.00 O
ATOM 11 C2' A B 882 64.148 113.446 63.370 1.00 21.54 C
ATOM 12 O2' A B 882 64.870 112.677 62.435 1.00 23.33 O
ATOM 13 C1' A B 882 64.769 114.842 63.376 1.00 20.38 C
ATOM 14 N9 A B 882 64.788 115.537 64.666 1.00 16.58 N
ATOM 15 C8 A B 882 64.027 116.610 65.061 1.00 15.19 C
ATOM 16 N7 A B 882 64.286 117.022 66.276 1.00 15.25 N
ATOM 17 C5 A B 882 65.280 116.160 66.714 1.00 14.56 C
ATOM 18 C6 A B 882 65.977 116.064 67.923 1.00 14.59 C
ATOM 19 N6 A B 882 65.773 116.876 68.957 1.00 15.52 N
ATOM 20 N1 A B 882 66.904 115.094 68.039 1.00 13.57 N
ATOM 21 C2 A B 882 67.111 114.284 67.004 1.00 14.13 C
ATOM 22 N3 A B 882 66.521 114.272 65.816 1.00 15.68 N
ATOM 23 C4 A B 882 65.601 115.245 65.734 1.00 15.15 C
ATOM 24 P C B 883 60.867 111.894 62.931 1.00 25.79 P
ATOM 25 OP1 C B 883 60.393 110.922 61.910 1.00 27.06 O
ATOM 26 OP2 C B 883 59.918 112.908 63.475 1.00 20.19 O
ATOM 27 O5' C B 883 61.530 111.058 64.119 1.00 22.91 O
TER
Atoms:
OP1: (64.807,123.121,76.423)
OP2: (65.023,123.282,73.870)
C3': (69.706,120.597,73.626)
C1': (68.791,118.610,74.476)
C5': (67.680,122.011,74.179)
O4': (67.897,119.686,74.716)
C8: (67.547,118.179,72.286)
O2': (70.986,119.252,75.227)
C6: (67.891,114.739,71.709)
C5: (67.827,116.085,72.079)
C4: (68.429,116.434,73.274)
P: (65.323,122.577,75.141)
C4': (68.620,120.936,74.613)
C2': (70.141,119.220,74.097)
C2: (69.040,114.365,73.685)
N1: (68.509,113.883,72.556)
N3: (69.061,115.612,74.133)
N6: (67.385,114.264,70.568)
N7: (67.267,117.197,71.467)
N9: (68.262,117.790,73.391)
O5': (66.892,122.431,75.286)
O3': (70.751,121.539,73.670)
OP2: (65.023,123.282,73.870)
C3': (69.706,120.597,73.626)
C1': (68.791,118.610,74.476)
C5': (67.680,122.011,74.179)
O4': (67.897,119.686,74.716)
C8: (67.547,118.179,72.286)
O2': (70.986,119.252,75.227)
C6: (67.891,114.739,71.709)
C5: (67.827,116.085,72.079)
C4: (68.429,116.434,73.274)
P: (65.323,122.577,75.141)
C4': (68.620,120.936,74.613)
C2': (70.141,119.220,74.097)
C2: (69.040,114.365,73.685)
N1: (68.509,113.883,72.556)
N3: (69.061,115.612,74.133)
N6: (67.385,114.264,70.568)
N7: (67.267,117.197,71.467)
N9: (68.262,117.790,73.391)
O5': (66.892,122.431,75.286)
O3': (70.751,121.539,73.670)
OP1: (59.904,117.610,64.457)
OP2: (61.211,118.659,62.515)
C3': (62.731,113.748,62.898)
C1': (64.769,114.842,63.376)
C5': (61.776,115.756,61.683)
O4': (64.040,115.630,62.453)
C8: (64.027,116.610,65.061)
O2': (64.870,112.677,62.435)
C6: (65.977,116.064,67.923)
C5: (65.280,116.160,66.714)
C4: (65.601,115.245,65.734)
P: (60.418,117.537,63.062)
C4': (62.958,114.855,61.892)
C2': (64.148,113.446,63.370)
C2: (67.111,114.284,67.004)
N1: (66.904,115.094,68.039)
N3: (66.521,114.272,65.816)
N6: (65.773,116.876,68.957)
N7: (64.286,117.022,66.276)
N9: (64.788,115.537,64.666)
O5': (61.294,116.216,62.948)
O3': (62.114,112.646,62.247)
OP2: (61.211,118.659,62.515)
C3': (62.731,113.748,62.898)
C1': (64.769,114.842,63.376)
C5': (61.776,115.756,61.683)
O4': (64.040,115.630,62.453)
C8: (64.027,116.610,65.061)
O2': (64.870,112.677,62.435)
C6: (65.977,116.064,67.923)
C5: (65.280,116.160,66.714)
C4: (65.601,115.245,65.734)
P: (60.418,117.537,63.062)
C4': (62.958,114.855,61.892)
C2': (64.148,113.446,63.370)
C2: (67.111,114.284,67.004)
N1: (66.904,115.094,68.039)
N3: (66.521,114.272,65.816)
N6: (65.773,116.876,68.957)
N7: (64.286,117.022,66.276)
N9: (64.788,115.537,64.666)
O5': (61.294,116.216,62.948)
O3': (62.114,112.646,62.247)
Image (generated by PyMOL):