ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K8A:A942:B79

Extra

PDB:
ATOM 1 O3' U A 941 55.861 71.012 108.915 1.00 38.54 O
ATOM 2 P A A 942 56.004 70.657 110.470 1.00 35.97 P
ATOM 3 OP1 A A 942 56.896 71.649 111.122 1.00 34.24 O
ATOM 4 OP2 A A 942 56.357 69.227 110.516 1.00 37.55 O
ATOM 5 O5' A A 942 54.513 70.829 111.015 1.00 37.61 O
ATOM 6 C5' A A 942 53.855 72.122 111.015 1.00 40.07 C
ATOM 7 C4' A A 942 52.544 72.054 111.766 1.00 41.38 C
ATOM 8 O4' A A 942 51.629 71.185 111.052 1.00 42.29 O
ATOM 9 C3' A A 942 52.599 71.463 113.165 1.00 43.30 C
ATOM 10 O3' A A 942 53.070 72.410 114.121 1.00 45.15 O
ATOM 11 C2' A A 942 51.166 70.961 113.376 1.00 43.63 C
ATOM 12 O2' A A 942 50.195 71.936 113.713 1.00 43.98 O
ATOM 13 C1' A A 942 50.825 70.459 111.976 1.00 43.89 C
ATOM 14 N9 A A 942 51.037 69.025 111.765 1.00 43.63 N
ATOM 15 C8 A A 942 52.038 68.404 111.060 1.00 44.66 C
ATOM 16 N7 A A 942 51.932 67.097 111.033 1.00 45.55 N
ATOM 17 C5 A A 942 50.788 66.840 111.778 1.00 44.45 C
ATOM 18 C6 A A 942 50.132 65.640 112.131 1.00 44.21 C
ATOM 19 N6 A A 942 50.563 64.426 111.785 1.00 42.54 N
ATOM 20 N1 A A 942 49.010 65.736 112.868 1.00 43.39 N
ATOM 21 C2 A A 942 48.595 66.950 113.237 1.00 44.42 C
ATOM 22 N3 A A 942 49.127 68.146 112.979 1.00 43.60 N
ATOM 23 C4 A A 942 50.232 68.018 112.236 1.00 43.19 C
ATOM 24 P G A 943 54.094 71.939 115.265 1.00 45.66 P
ATOM 25 OP1 G A 943 54.166 73.041 116.261 1.00 47.12 O
ATOM 26 OP2 G A 943 55.343 71.422 114.660 1.00 44.59 O
ATOM 27 O5' G A 943 53.328 70.728 115.957 1.00 45.39 O
TER

ATOM 1 O3' U B 78 43.822 69.275 124.695 1.00 55.61 O
ATOM 2 P A B 79 44.065 70.448 123.633 1.00 57.81 P
ATOM 3 OP1 A B 79 44.549 71.599 124.445 1.00 56.50 O
ATOM 4 OP2 A B 79 42.869 70.609 122.765 1.00 57.32 O
ATOM 5 O5' A B 79 45.264 69.906 122.733 1.00 55.68 O
ATOM 6 C5' A B 79 46.573 69.726 123.296 1.00 52.81 C
ATOM 7 C4' A B 79 47.553 69.273 122.240 1.00 51.18 C
ATOM 8 O4' A B 79 47.303 67.894 121.867 1.00 50.46 O
ATOM 9 C3' A B 79 47.501 69.996 120.907 1.00 51.17 C
ATOM 10 O3' A B 79 48.104 71.270 120.940 1.00 50.48 O
ATOM 11 C2' A B 79 48.232 69.027 119.992 1.00 50.49 C
ATOM 12 O2' A B 79 49.640 69.078 120.101 1.00 51.74 O
ATOM 13 C1' A B 79 47.709 67.695 120.520 1.00 49.48 C
ATOM 14 N9 A B 79 46.547 67.277 119.754 1.00 48.49 N
ATOM 15 C8 A B 79 45.220 67.334 120.101 1.00 49.29 C
ATOM 16 N7 A B 79 44.418 66.830 119.200 1.00 48.70 N
ATOM 17 C5 A B 79 45.275 66.422 118.188 1.00 49.32 C
ATOM 18 C6 A B 79 45.050 65.789 116.959 1.00 49.58 C
ATOM 19 N6 A B 79 43.840 65.429 116.531 1.00 50.10 N
ATOM 20 N1 A B 79 46.127 65.530 116.175 1.00 49.20 N
ATOM 21 C2 A B 79 47.341 65.893 116.613 1.00 48.34 C
ATOM 22 N3 A B 79 47.679 66.485 117.756 1.00 48.33 N
ATOM 23 C4 A B 79 46.587 66.717 118.508 1.00 48.98 C
ATOM 24 P C B 80 47.411 72.488 120.160 1.00 51.51 P
ATOM 25 OP1 C B 80 48.323 73.650 120.329 1.00 51.78 O
ATOM 26 OP2 C B 80 45.979 72.602 120.572 1.00 51.96 O
ATOM 27 O5' C B 80 47.436 72.034 118.636 1.00 47.20 O
TER

Atoms:
OP1: (56.896,71.649,111.122)
OP2: (56.357,69.227,110.516)
C3': (52.599,71.463,113.165)
C1': (50.825,70.459,111.976)
C5': (53.855,72.122,111.015)
O4': (51.629,71.185,111.052)
C8: (52.038,68.404,111.060)
O2': (50.195,71.936,113.713)
C6: (50.132,65.640,112.131)
C5: (50.788,66.840,111.778)
C4: (50.232,68.018,112.236)
P: (56.004,70.657,110.470)
C4': (52.544,72.054,111.766)
C2': (51.166,70.961,113.376)
C2: (48.595,66.950,113.237)
N1: (49.010,65.736,112.868)
N3: (49.127,68.146,112.979)
N6: (50.563,64.426,111.785)
N7: (51.932,67.097,111.033)
N9: (51.037,69.025,111.765)
O5': (54.513,70.829,111.015)
O3': (53.070,72.410,114.121)
OP1: (44.549,71.599,124.445)
OP2: (42.869,70.609,122.765)
C3': (47.501,69.996,120.907)
C1': (47.709,67.695,120.520)
C5': (46.573,69.726,123.296)
O4': (47.303,67.894,121.867)
C8: (45.220,67.334,120.101)
O2': (49.640,69.078,120.101)
C6: (45.050,65.789,116.959)
C5: (45.275,66.422,118.188)
C4: (46.587,66.717,118.508)
P: (44.065,70.448,123.633)
C4': (47.553,69.273,122.240)
C2': (48.232,69.027,119.992)
C2: (47.341,65.893,116.613)
N1: (46.127,65.530,116.175)
N3: (47.679,66.485,117.756)
N6: (43.840,65.429,116.531)
N7: (44.418,66.830,119.200)
N9: (46.547,67.277,119.754)
O5': (45.264,69.906,122.733)
O3': (48.104,71.270,120.940)
Image (generated by PyMOL):
PyMOL image
show in jmol