Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A999:A1253
Extra
PDB:
ATOM 1 O3' G A 998 43.424 95.055 67.672 1.00 36.52 O
ATOM 2 P A A 999 44.972 94.885 68.030 1.00 39.04 P
ATOM 3 OP1 A A 999 45.477 96.232 68.371 1.00 38.52 O
ATOM 4 OP2 A A 999 45.679 94.078 67.006 1.00 40.29 O
ATOM 5 O5' A A 999 44.934 93.989 69.336 1.00 38.64 O
ATOM 6 C5' A A 999 45.360 94.524 70.581 1.00 36.78 C
ATOM 7 C4' A A 999 44.165 95.024 71.314 1.00 34.58 C
ATOM 8 O4' A A 999 43.286 93.910 71.594 1.00 33.42 O
ATOM 9 C3' A A 999 44.478 95.597 72.664 1.00 33.69 C
ATOM 10 O3' A A 999 44.956 96.922 72.510 1.00 31.87 O
ATOM 11 C2' A A 999 43.147 95.450 73.377 1.00 31.98 C
ATOM 12 O2' A A 999 42.214 96.413 72.957 1.00 35.34 O
ATOM 13 C1' A A 999 42.684 94.097 72.849 1.00 30.78 C
ATOM 14 N9 A A 999 43.084 92.995 73.709 1.00 30.43 N
ATOM 15 C8 A A 999 43.883 91.911 73.426 1.00 30.57 C
ATOM 16 N7 A A 999 43.995 91.062 74.421 1.00 30.89 N
ATOM 17 C5 A A 999 43.246 91.643 75.431 1.00 28.82 C
ATOM 18 C6 A A 999 42.973 91.245 76.732 1.00 28.55 C
ATOM 19 N6 A A 999 43.427 90.110 77.261 1.00 27.68 N
ATOM 20 N1 A A 999 42.199 92.049 77.484 1.00 26.76 N
ATOM 21 C2 A A 999 41.721 93.167 76.946 1.00 27.81 C
ATOM 22 N3 A A 999 41.896 93.650 75.727 1.00 29.64 N
ATOM 23 C4 A A 999 42.684 92.833 75.008 1.00 29.70 C
ATOM 24 P U A1000 46.378 97.306 73.134 1.00 31.64 P
ATOM 25 OP1 U A1000 46.724 98.657 72.644 1.00 30.51 O
ATOM 26 OP2 U A1000 47.291 96.166 72.871 1.00 30.66 O
ATOM 27 O5' U A1000 46.093 97.383 74.698 1.00 30.12 O
TER
ATOM 1 O3' U B1252 37.869 103.665 82.670 1.00 33.27 O
ATOM 2 P A B1253 37.881 103.438 81.099 1.00 33.16 P
ATOM 3 OP1 A B1253 38.288 104.722 80.493 1.00 32.99 O
ATOM 4 OP2 A B1253 36.568 102.847 80.784 1.00 32.68 O
ATOM 5 O5' A B1253 39.056 102.386 80.856 1.00 32.57 O
ATOM 6 C5' A B1253 40.422 102.808 81.021 1.00 31.94 C
ATOM 7 C4' A B1253 41.387 101.735 80.616 1.00 32.00 C
ATOM 8 O4' A B1253 41.282 100.621 81.523 1.00 33.32 O
ATOM 9 C3' A B1253 41.146 101.138 79.255 1.00 32.28 C
ATOM 10 O3' A B1253 41.678 101.982 78.247 1.00 34.82 O
ATOM 11 C2' A B1253 41.852 99.793 79.371 1.00 33.17 C
ATOM 12 O2' A B1253 43.252 99.860 79.246 1.00 34.59 O
ATOM 13 C1' A B1253 41.533 99.416 80.818 1.00 33.43 C
ATOM 14 N9 A B1253 40.352 98.564 80.933 1.00 34.66 N
ATOM 15 C8 A B1253 39.094 98.903 81.361 1.00 35.30 C
ATOM 16 N7 A B1253 38.249 97.908 81.353 1.00 35.23 N
ATOM 17 C5 A B1253 38.998 96.841 80.883 1.00 34.86 C
ATOM 18 C6 A B1253 38.678 95.505 80.649 1.00 35.18 C
ATOM 19 N6 A B1253 37.456 94.990 80.836 1.00 34.66 N
ATOM 20 N1 A B1253 39.659 94.699 80.203 1.00 34.42 N
ATOM 21 C2 A B1253 40.866 95.218 79.993 1.00 35.34 C
ATOM 22 N3 A B1253 41.287 96.461 80.165 1.00 35.68 N
ATOM 23 C4 A B1253 40.292 97.231 80.623 1.00 34.43 C
ATOM 24 P G B1254 40.843 102.230 76.894 1.00 36.38 P
ATOM 25 OP1 G B1254 41.724 102.905 75.917 1.00 36.01 O
ATOM 26 OP2 G B1254 39.545 102.850 77.241 1.00 37.60 O
ATOM 27 O5' G B1254 40.536 100.749 76.392 1.00 36.01 O
TER
ATOM 2 P A A 999 44.972 94.885 68.030 1.00 39.04 P
ATOM 3 OP1 A A 999 45.477 96.232 68.371 1.00 38.52 O
ATOM 4 OP2 A A 999 45.679 94.078 67.006 1.00 40.29 O
ATOM 5 O5' A A 999 44.934 93.989 69.336 1.00 38.64 O
ATOM 6 C5' A A 999 45.360 94.524 70.581 1.00 36.78 C
ATOM 7 C4' A A 999 44.165 95.024 71.314 1.00 34.58 C
ATOM 8 O4' A A 999 43.286 93.910 71.594 1.00 33.42 O
ATOM 9 C3' A A 999 44.478 95.597 72.664 1.00 33.69 C
ATOM 10 O3' A A 999 44.956 96.922 72.510 1.00 31.87 O
ATOM 11 C2' A A 999 43.147 95.450 73.377 1.00 31.98 C
ATOM 12 O2' A A 999 42.214 96.413 72.957 1.00 35.34 O
ATOM 13 C1' A A 999 42.684 94.097 72.849 1.00 30.78 C
ATOM 14 N9 A A 999 43.084 92.995 73.709 1.00 30.43 N
ATOM 15 C8 A A 999 43.883 91.911 73.426 1.00 30.57 C
ATOM 16 N7 A A 999 43.995 91.062 74.421 1.00 30.89 N
ATOM 17 C5 A A 999 43.246 91.643 75.431 1.00 28.82 C
ATOM 18 C6 A A 999 42.973 91.245 76.732 1.00 28.55 C
ATOM 19 N6 A A 999 43.427 90.110 77.261 1.00 27.68 N
ATOM 20 N1 A A 999 42.199 92.049 77.484 1.00 26.76 N
ATOM 21 C2 A A 999 41.721 93.167 76.946 1.00 27.81 C
ATOM 22 N3 A A 999 41.896 93.650 75.727 1.00 29.64 N
ATOM 23 C4 A A 999 42.684 92.833 75.008 1.00 29.70 C
ATOM 24 P U A1000 46.378 97.306 73.134 1.00 31.64 P
ATOM 25 OP1 U A1000 46.724 98.657 72.644 1.00 30.51 O
ATOM 26 OP2 U A1000 47.291 96.166 72.871 1.00 30.66 O
ATOM 27 O5' U A1000 46.093 97.383 74.698 1.00 30.12 O
TER
ATOM 1 O3' U B1252 37.869 103.665 82.670 1.00 33.27 O
ATOM 2 P A B1253 37.881 103.438 81.099 1.00 33.16 P
ATOM 3 OP1 A B1253 38.288 104.722 80.493 1.00 32.99 O
ATOM 4 OP2 A B1253 36.568 102.847 80.784 1.00 32.68 O
ATOM 5 O5' A B1253 39.056 102.386 80.856 1.00 32.57 O
ATOM 6 C5' A B1253 40.422 102.808 81.021 1.00 31.94 C
ATOM 7 C4' A B1253 41.387 101.735 80.616 1.00 32.00 C
ATOM 8 O4' A B1253 41.282 100.621 81.523 1.00 33.32 O
ATOM 9 C3' A B1253 41.146 101.138 79.255 1.00 32.28 C
ATOM 10 O3' A B1253 41.678 101.982 78.247 1.00 34.82 O
ATOM 11 C2' A B1253 41.852 99.793 79.371 1.00 33.17 C
ATOM 12 O2' A B1253 43.252 99.860 79.246 1.00 34.59 O
ATOM 13 C1' A B1253 41.533 99.416 80.818 1.00 33.43 C
ATOM 14 N9 A B1253 40.352 98.564 80.933 1.00 34.66 N
ATOM 15 C8 A B1253 39.094 98.903 81.361 1.00 35.30 C
ATOM 16 N7 A B1253 38.249 97.908 81.353 1.00 35.23 N
ATOM 17 C5 A B1253 38.998 96.841 80.883 1.00 34.86 C
ATOM 18 C6 A B1253 38.678 95.505 80.649 1.00 35.18 C
ATOM 19 N6 A B1253 37.456 94.990 80.836 1.00 34.66 N
ATOM 20 N1 A B1253 39.659 94.699 80.203 1.00 34.42 N
ATOM 21 C2 A B1253 40.866 95.218 79.993 1.00 35.34 C
ATOM 22 N3 A B1253 41.287 96.461 80.165 1.00 35.68 N
ATOM 23 C4 A B1253 40.292 97.231 80.623 1.00 34.43 C
ATOM 24 P G B1254 40.843 102.230 76.894 1.00 36.38 P
ATOM 25 OP1 G B1254 41.724 102.905 75.917 1.00 36.01 O
ATOM 26 OP2 G B1254 39.545 102.850 77.241 1.00 37.60 O
ATOM 27 O5' G B1254 40.536 100.749 76.392 1.00 36.01 O
TER
Atoms:
OP1: (45.477,96.232,68.371)
OP2: (45.679,94.078,67.006)
C3': (44.478,95.597,72.664)
C1': (42.684,94.097,72.849)
C5': (45.360,94.524,70.581)
O4': (43.286,93.910,71.594)
C8: (43.883,91.911,73.426)
O2': (42.214,96.413,72.957)
C6: (42.973,91.245,76.732)
C5: (43.246,91.643,75.431)
C4: (42.684,92.833,75.008)
P: (44.972,94.885,68.030)
C4': (44.165,95.024,71.314)
C2': (43.147,95.450,73.377)
C2: (41.721,93.167,76.946)
N1: (42.199,92.049,77.484)
N3: (41.896,93.650,75.727)
N6: (43.427,90.110,77.261)
N7: (43.995,91.062,74.421)
N9: (43.084,92.995,73.709)
O5': (44.934,93.989,69.336)
O3': (44.956,96.922,72.510)
OP2: (45.679,94.078,67.006)
C3': (44.478,95.597,72.664)
C1': (42.684,94.097,72.849)
C5': (45.360,94.524,70.581)
O4': (43.286,93.910,71.594)
C8: (43.883,91.911,73.426)
O2': (42.214,96.413,72.957)
C6: (42.973,91.245,76.732)
C5: (43.246,91.643,75.431)
C4: (42.684,92.833,75.008)
P: (44.972,94.885,68.030)
C4': (44.165,95.024,71.314)
C2': (43.147,95.450,73.377)
C2: (41.721,93.167,76.946)
N1: (42.199,92.049,77.484)
N3: (41.896,93.650,75.727)
N6: (43.427,90.110,77.261)
N7: (43.995,91.062,74.421)
N9: (43.084,92.995,73.709)
O5': (44.934,93.989,69.336)
O3': (44.956,96.922,72.510)
OP1: (38.288,104.722,80.493)
OP2: (36.568,102.847,80.784)
C3': (41.146,101.138,79.255)
C1': (41.533,99.416,80.818)
C5': (40.422,102.808,81.021)
O4': (41.282,100.621,81.523)
C8: (39.094,98.903,81.361)
O2': (43.252,99.860,79.246)
C6: (38.678,95.505,80.649)
C5: (38.998,96.841,80.883)
C4: (40.292,97.231,80.623)
P: (37.881,103.438,81.099)
C4': (41.387,101.735,80.616)
C2': (41.852,99.793,79.371)
C2: (40.866,95.218,79.993)
N1: (39.659,94.699,80.203)
N3: (41.287,96.461,80.165)
N6: (37.456,94.990,80.836)
N7: (38.249,97.908,81.353)
N9: (40.352,98.564,80.933)
O5': (39.056,102.386,80.856)
O3': (41.678,101.982,78.247)
OP2: (36.568,102.847,80.784)
C3': (41.146,101.138,79.255)
C1': (41.533,99.416,80.818)
C5': (40.422,102.808,81.021)
O4': (41.282,100.621,81.523)
C8: (39.094,98.903,81.361)
O2': (43.252,99.860,79.246)
C6: (38.678,95.505,80.649)
C5: (38.998,96.841,80.883)
C4: (40.292,97.231,80.623)
P: (37.881,103.438,81.099)
C4': (41.387,101.735,80.616)
C2': (41.852,99.793,79.371)
C2: (40.866,95.218,79.993)
N1: (39.659,94.699,80.203)
N3: (41.287,96.461,80.165)
N6: (37.456,94.990,80.836)
N7: (38.249,97.908,81.353)
N9: (40.352,98.564,80.933)
O5': (39.056,102.386,80.856)
O3': (41.678,101.982,78.247)
Image (generated by PyMOL):