ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NJI:A999:A1253

Extra

PDB:
ATOM 1 O3' G A 998 43.192 94.723 67.216 1.00 26.15 O
ATOM 2 P A A 999 44.754 94.515 67.485 1.00 28.16 P
ATOM 3 OP1 A A 999 45.301 95.881 67.699 1.00 27.03 O
ATOM 4 OP2 A A 999 45.291 93.662 66.410 1.00 27.48 O
ATOM 5 O5' A A 999 44.810 93.633 68.810 1.00 25.56 O
ATOM 6 C5' A A 999 45.179 94.196 70.064 1.00 21.41 C
ATOM 7 C4' A A 999 43.965 94.736 70.764 1.00 20.40 C
ATOM 8 O4' A A 999 43.005 93.682 70.987 1.00 20.08 O
ATOM 9 C3' A A 999 44.246 95.275 72.144 1.00 20.88 C
ATOM 10 O3' A A 999 44.745 96.599 72.024 1.00 23.85 O
ATOM 11 C2' A A 999 42.872 95.200 72.789 1.00 19.27 C
ATOM 12 O2' A A 999 42.005 96.220 72.338 1.00 18.07 O
ATOM 13 C1' A A 999 42.377 93.866 72.242 1.00 18.92 C
ATOM 14 N9 A A 999 42.768 92.762 73.118 1.00 19.48 N
ATOM 15 C8 A A 999 43.622 91.720 72.858 1.00 19.78 C
ATOM 16 N7 A A 999 43.773 90.895 73.865 1.00 18.23 N
ATOM 17 C5 A A 999 42.968 91.432 74.855 1.00 17.86 C
ATOM 18 C6 A A 999 42.704 91.039 76.173 1.00 17.19 C
ATOM 19 N6 A A 999 43.229 89.952 76.739 1.00 16.79 N
ATOM 20 N1 A A 999 41.868 91.809 76.903 1.00 16.59 N
ATOM 21 C2 A A 999 41.332 92.892 76.332 1.00 17.81 C
ATOM 22 N3 A A 999 41.496 93.360 75.103 1.00 20.37 N
ATOM 23 C4 A A 999 42.339 92.578 74.407 1.00 18.90 C
ATOM 24 P U A1000 46.185 96.960 72.615 1.00 24.33 P
ATOM 25 OP1 U A1000 46.537 98.251 71.997 1.00 24.62 O
ATOM 26 OP2 U A1000 47.084 95.784 72.427 1.00 23.87 O
ATOM 27 O5' U A1000 45.925 97.176 74.174 1.00 20.96 O
TER

ATOM 1 O3' U B1252 37.662 103.383 82.164 1.00 20.86 O
ATOM 2 P A B1253 37.640 103.240 80.578 1.00 21.95 P
ATOM 3 OP1 A B1253 38.009 104.559 80.032 1.00 23.43 O
ATOM 4 OP2 A B1253 36.355 102.624 80.213 1.00 21.64 O
ATOM 5 O5' A B1253 38.822 102.231 80.260 1.00 19.44 O
ATOM 6 C5' A B1253 40.178 102.629 80.447 1.00 20.13 C
ATOM 7 C4' A B1253 41.094 101.507 80.086 1.00 20.40 C
ATOM 8 O4' A B1253 40.967 100.432 81.045 1.00 22.21 O
ATOM 9 C3' A B1253 40.793 100.867 78.751 1.00 20.26 C
ATOM 10 O3' A B1253 41.400 101.647 77.731 1.00 23.40 O
ATOM 11 C2' A B1253 41.470 99.515 78.914 1.00 22.13 C
ATOM 12 O2' A B1253 42.861 99.601 78.745 1.00 23.47 O
ATOM 13 C1' A B1253 41.198 99.202 80.390 1.00 24.15 C
ATOM 14 N9 A B1253 40.031 98.340 80.561 1.00 26.83 N
ATOM 15 C8 A B1253 38.773 98.649 81.025 1.00 26.81 C
ATOM 16 N7 A B1253 37.942 97.639 80.996 1.00 26.02 N
ATOM 17 C5 A B1253 38.707 96.594 80.492 1.00 25.56 C
ATOM 18 C6 A B1253 38.409 95.261 80.209 1.00 24.96 C
ATOM 19 N6 A B1253 37.198 94.724 80.369 1.00 26.18 N
ATOM 20 N1 A B1253 39.404 94.483 79.736 1.00 24.66 N
ATOM 21 C2 A B1253 40.608 95.024 79.543 1.00 25.89 C
ATOM 22 N3 A B1253 41.008 96.269 79.754 1.00 26.78 N
ATOM 23 C4 A B1253 39.996 97.009 80.236 1.00 25.82 C
ATOM 24 P G B1254 40.611 101.969 76.371 1.00 23.88 P
ATOM 25 OP1 G B1254 41.605 102.577 75.467 1.00 23.88 O
ATOM 26 OP2 G B1254 39.363 102.702 76.673 1.00 22.78 O
ATOM 27 O5' G B1254 40.259 100.523 75.822 1.00 22.76 O
TER

Atoms:
OP1: (45.301,95.881,67.699)
OP2: (45.291,93.662,66.410)
C3': (44.246,95.275,72.144)
C1': (42.377,93.866,72.242)
C5': (45.179,94.196,70.064)
O4': (43.005,93.682,70.987)
C8: (43.622,91.720,72.858)
O2': (42.005,96.220,72.338)
C6: (42.704,91.039,76.173)
C5: (42.968,91.432,74.855)
C4: (42.339,92.578,74.407)
P: (44.754,94.515,67.485)
C4': (43.965,94.736,70.764)
C2': (42.872,95.200,72.789)
C2: (41.332,92.892,76.332)
N1: (41.868,91.809,76.903)
N3: (41.496,93.360,75.103)
N6: (43.229,89.952,76.739)
N7: (43.773,90.895,73.865)
N9: (42.768,92.762,73.118)
O5': (44.810,93.633,68.810)
O3': (44.745,96.599,72.024)
OP1: (38.009,104.559,80.032)
OP2: (36.355,102.624,80.213)
C3': (40.793,100.867,78.751)
C1': (41.198,99.202,80.390)
C5': (40.178,102.629,80.447)
O4': (40.967,100.432,81.045)
C8: (38.773,98.649,81.025)
O2': (42.861,99.601,78.745)
C6: (38.409,95.261,80.209)
C5: (38.707,96.594,80.492)
C4: (39.996,97.009,80.236)
P: (37.640,103.240,80.578)
C4': (41.094,101.507,80.086)
C2': (41.470,99.515,78.914)
C2: (40.608,95.024,79.543)
N1: (39.404,94.483,79.736)
N3: (41.008,96.269,79.754)
N6: (37.198,94.724,80.369)
N7: (37.942,97.639,80.996)
N9: (40.031,98.340,80.561)
O5': (38.822,102.231,80.260)
O3': (41.400,101.647,77.731)
Image (generated by PyMOL):
PyMOL image
show in jmol