ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ5:0942:979

Extra

PDB:
ATOM 1 O3' U A 941 55.430 70.671 108.545 1.00 40.99 O
ATOM 2 P A A 942 55.572 70.418 110.127 1.00 39.21 P
ATOM 3 OP1 A A 942 56.361 71.556 110.655 1.00 40.06 O
ATOM 4 OP2 A A 942 56.043 69.035 110.352 1.00 40.77 O
ATOM 5 O5' A A 942 54.095 70.571 110.700 1.00 40.18 O
ATOM 6 C5' A A 942 53.441 71.856 110.711 1.00 41.65 C
ATOM 7 C4' A A 942 52.118 71.768 111.430 1.00 43.38 C
ATOM 8 O4' A A 942 51.207 70.916 110.685 1.00 44.83 O
ATOM 9 C3' A A 942 52.170 71.128 112.803 1.00 43.86 C
ATOM 10 O3' A A 942 52.597 72.045 113.794 1.00 46.22 O
ATOM 11 C2' A A 942 50.732 70.679 113.000 1.00 43.22 C
ATOM 12 O2' A A 942 49.879 71.739 113.369 1.00 42.06 O
ATOM 13 C1' A A 942 50.378 70.199 111.590 1.00 43.82 C
ATOM 14 N9 A A 942 50.623 68.767 111.400 1.00 43.64 N
ATOM 15 C8 A A 942 51.643 68.171 110.698 1.00 44.17 C
ATOM 16 N7 A A 942 51.598 66.864 110.710 1.00 44.62 N
ATOM 17 C5 A A 942 50.473 66.576 111.471 1.00 44.21 C
ATOM 18 C6 A A 942 49.881 65.363 111.859 1.00 45.42 C
ATOM 19 N6 A A 942 50.365 64.161 111.532 1.00 46.03 N
ATOM 20 N1 A A 942 48.762 65.425 112.611 1.00 45.46 N
ATOM 21 C2 A A 942 48.289 66.628 112.954 1.00 45.65 C
ATOM 22 N3 A A 942 48.760 67.835 112.657 1.00 43.61 N
ATOM 23 C4 A A 942 49.864 67.738 111.901 1.00 43.11 C
ATOM 24 P G A 943 53.669 71.582 114.896 1.00 46.86 P
ATOM 25 OP1 G A 943 53.827 72.727 115.815 1.00 49.50 O
ATOM 26 OP2 G A 943 54.861 71.014 114.226 1.00 44.04 O
ATOM 27 O5' G A 943 52.932 70.396 115.663 1.00 46.93 O
TER

ATOM 1 O3' U B 78 43.361 68.990 124.382 1.00 59.10 O
ATOM 2 P A B 79 43.553 70.193 123.335 1.00 59.67 P
ATOM 3 OP1 A B 79 44.016 71.380 124.109 1.00 56.71 O
ATOM 4 OP2 A B 79 42.318 70.295 122.519 1.00 59.23 O
ATOM 5 O5' A B 79 44.739 69.670 122.401 1.00 58.67 O
ATOM 6 C5' A B 79 46.068 69.484 122.936 1.00 55.62 C
ATOM 7 C4' A B 79 47.018 68.967 121.875 1.00 55.13 C
ATOM 8 O4' A B 79 46.720 67.587 121.547 1.00 55.70 O
ATOM 9 C3' A B 79 47.011 69.654 120.521 1.00 54.86 C
ATOM 10 O3' A B 79 47.698 70.901 120.535 1.00 54.45 O
ATOM 11 C2' A B 79 47.710 68.618 119.650 1.00 54.66 C
ATOM 12 O2' A B 79 49.112 68.590 119.806 1.00 55.11 O
ATOM 13 C1' A B 79 47.136 67.320 120.216 1.00 54.73 C
ATOM 14 N9 A B 79 45.989 66.859 119.438 1.00 55.09 N
ATOM 15 C8 A B 79 44.652 66.886 119.762 1.00 55.60 C
ATOM 16 N7 A B 79 43.872 66.405 118.825 1.00 56.03 N
ATOM 17 C5 A B 79 44.754 66.030 117.817 1.00 55.66 C
ATOM 18 C6 A B 79 44.555 65.452 116.552 1.00 54.73 C
ATOM 19 N6 A B 79 43.356 65.126 116.070 1.00 54.31 N
ATOM 20 N1 A B 79 45.648 65.215 115.790 1.00 55.17 N
ATOM 21 C2 A B 79 46.852 65.541 116.277 1.00 54.35 C
ATOM 22 N3 A B 79 47.166 66.083 117.450 1.00 53.83 N
ATOM 23 C4 A B 79 46.059 66.305 118.182 1.00 54.99 C
ATOM 24 P C B 80 47.021 72.188 119.853 1.00 53.47 P
ATOM 25 OP1 C B 80 47.970 73.322 120.023 1.00 56.29 O
ATOM 26 OP2 C B 80 45.631 72.320 120.363 1.00 53.40 O
ATOM 27 O5' C B 80 46.975 71.813 118.306 1.00 52.20 O
TER

Atoms:
OP1: (56.361,71.556,110.655)
OP2: (56.043,69.035,110.352)
C3': (52.170,71.128,112.803)
C1': (50.378,70.199,111.590)
C5': (53.441,71.856,110.711)
O4': (51.207,70.916,110.685)
C8: (51.643,68.171,110.698)
O2': (49.879,71.739,113.369)
C6: (49.881,65.363,111.859)
C5: (50.473,66.576,111.471)
C4: (49.864,67.738,111.901)
P: (55.572,70.418,110.127)
C4': (52.118,71.768,111.430)
C2': (50.732,70.679,113.000)
C2: (48.289,66.628,112.954)
N1: (48.762,65.425,112.611)
N3: (48.760,67.835,112.657)
N6: (50.365,64.161,111.532)
N7: (51.598,66.864,110.710)
N9: (50.623,68.767,111.400)
O5': (54.095,70.571,110.700)
O3': (52.597,72.045,113.794)
OP1: (44.016,71.380,124.109)
OP2: (42.318,70.295,122.519)
C3': (47.011,69.654,120.521)
C1': (47.136,67.320,120.216)
C5': (46.068,69.484,122.936)
O4': (46.720,67.587,121.547)
C8: (44.652,66.886,119.762)
O2': (49.112,68.590,119.806)
C6: (44.555,65.452,116.552)
C5: (44.754,66.030,117.817)
C4: (46.059,66.305,118.182)
P: (43.553,70.193,123.335)
C4': (47.018,68.967,121.875)
C2': (47.710,68.618,119.650)
C2: (46.852,65.541,116.277)
N1: (45.648,65.215,115.790)
N3: (47.166,66.083,117.450)
N6: (43.356,65.126,116.070)
N7: (43.872,66.405,118.825)
N9: (45.989,66.859,119.438)
O5': (44.739,69.670,122.401)
O3': (47.698,70.901,120.535)
Image (generated by PyMOL):
PyMOL image
show in jmol