Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:5346:5341
Extra
PDB:
ATOM 1 O3' A A 345 117.290 1.624 191.961 1.00 42.98 O
ATOM 2 P A A 346 115.816 1.011 192.138 1.00 44.95 P
ATOM 3 OP1 A A 346 115.124 1.830 193.163 1.00 44.67 O
ATOM 4 OP2 A A 346 115.940 -0.432 192.343 1.00 44.96 O
ATOM 5 O5' A A 346 115.171 1.285 190.726 1.00 45.51 O
ATOM 6 C5' A A 346 114.783 0.223 189.892 1.00 45.92 C
ATOM 7 C4' A A 346 113.439 0.491 189.299 1.00 46.32 C
ATOM 8 O4' A A 346 112.441 -0.120 190.136 1.00 46.23 O
ATOM 9 C3' A A 346 113.068 1.951 189.204 1.00 46.33 C
ATOM 10 O3' A A 346 112.157 2.138 188.121 1.00 46.85 O
ATOM 11 C2' A A 346 112.303 2.173 190.501 1.00 45.99 C
ATOM 12 O2' A A 346 111.398 3.238 190.423 1.00 46.12 O
ATOM 13 C1' A A 346 111.565 0.849 190.642 1.00 46.14 C
ATOM 14 N9 A A 346 111.218 0.436 192.013 1.00 45.76 N
ATOM 15 C8 A A 346 111.898 0.561 193.202 1.00 45.25 C
ATOM 16 N7 A A 346 111.323 -0.007 194.235 1.00 45.04 N
ATOM 17 C5 A A 346 110.202 -0.618 193.689 1.00 45.45 C
ATOM 18 C6 A A 346 109.153 -1.425 194.248 1.00 45.51 C
ATOM 19 N6 A A 346 109.068 -1.770 195.556 1.00 45.13 N
ATOM 20 N1 A A 346 108.170 -1.879 193.409 1.00 45.99 N
ATOM 21 C2 A A 346 108.257 -1.520 192.124 1.00 46.38 C
ATOM 22 N3 A A 346 109.175 -0.790 191.497 1.00 46.37 N
ATOM 23 C4 A A 346 110.142 -0.363 192.327 1.00 45.89 C
ATOM 24 P C A 347 112.619 2.148 186.560 1.00 46.94 P
ATOM 25 OP1 C A 347 111.461 1.610 185.765 1.00 47.46 O
ATOM 26 OP2 C A 347 113.944 1.464 186.439 1.00 46.82 O
ATOM 27 O5' C A 347 112.765 3.706 186.274 1.00 46.95 O
TER
ATOM 1 O3' U B 340 116.625 0.092 204.105 1.00 37.01 O
ATOM 2 P A B 341 117.035 -1.228 203.329 1.00 38.58 P
ATOM 3 OP1 A B 341 117.943 -2.023 204.218 1.00 38.26 O
ATOM 4 OP2 A B 341 117.528 -0.836 201.981 1.00 38.85 O
ATOM 5 O5' A B 341 115.661 -1.950 203.226 1.00 38.86 O
ATOM 6 C5' A B 341 115.194 -2.756 204.276 1.00 38.71 C
ATOM 7 C4' A B 341 113.971 -3.462 203.844 1.00 39.07 C
ATOM 8 O4' A B 341 113.083 -2.504 203.227 1.00 39.31 O
ATOM 9 C3' A B 341 114.178 -4.467 202.758 1.00 39.41 C
ATOM 10 O3' A B 341 114.723 -5.697 203.214 1.00 39.31 O
ATOM 11 C2' A B 341 112.788 -4.565 202.150 1.00 39.82 C
ATOM 12 O2' A B 341 111.922 -5.291 203.009 1.00 39.78 O
ATOM 13 C1' A B 341 112.362 -3.106 202.201 1.00 39.76 C
ATOM 14 N9 A B 341 112.649 -2.377 200.966 1.00 40.00 N
ATOM 15 C8 A B 341 113.499 -1.358 200.892 1.00 39.81 C
ATOM 16 N7 A B 341 113.555 -0.812 199.708 1.00 40.11 N
ATOM 17 C5 A B 341 112.632 -1.501 198.967 1.00 40.52 C
ATOM 18 C6 A B 341 112.265 -1.405 197.636 1.00 40.98 C
ATOM 19 N6 A B 341 112.746 -0.538 196.767 1.00 41.11 N
ATOM 20 N1 A B 341 111.358 -2.277 197.209 1.00 41.32 N
ATOM 21 C2 A B 341 110.866 -3.172 198.069 1.00 41.21 C
ATOM 22 N3 A B 341 111.155 -3.350 199.334 1.00 40.80 N
ATOM 23 C4 A B 341 112.059 -2.465 199.729 1.00 40.46 C
ATOM 24 P G B 342 115.865 -6.381 202.321 1.00 43.19 P
ATOM 25 OP1 G B 342 116.134 -7.749 202.867 1.00 43.13 O
ATOM 26 OP2 G B 342 116.951 -5.418 202.243 1.00 42.96 O
ATOM 27 O5' G B 342 115.166 -6.474 200.877 1.00 43.72 O
TER
ATOM 2 P A A 346 115.816 1.011 192.138 1.00 44.95 P
ATOM 3 OP1 A A 346 115.124 1.830 193.163 1.00 44.67 O
ATOM 4 OP2 A A 346 115.940 -0.432 192.343 1.00 44.96 O
ATOM 5 O5' A A 346 115.171 1.285 190.726 1.00 45.51 O
ATOM 6 C5' A A 346 114.783 0.223 189.892 1.00 45.92 C
ATOM 7 C4' A A 346 113.439 0.491 189.299 1.00 46.32 C
ATOM 8 O4' A A 346 112.441 -0.120 190.136 1.00 46.23 O
ATOM 9 C3' A A 346 113.068 1.951 189.204 1.00 46.33 C
ATOM 10 O3' A A 346 112.157 2.138 188.121 1.00 46.85 O
ATOM 11 C2' A A 346 112.303 2.173 190.501 1.00 45.99 C
ATOM 12 O2' A A 346 111.398 3.238 190.423 1.00 46.12 O
ATOM 13 C1' A A 346 111.565 0.849 190.642 1.00 46.14 C
ATOM 14 N9 A A 346 111.218 0.436 192.013 1.00 45.76 N
ATOM 15 C8 A A 346 111.898 0.561 193.202 1.00 45.25 C
ATOM 16 N7 A A 346 111.323 -0.007 194.235 1.00 45.04 N
ATOM 17 C5 A A 346 110.202 -0.618 193.689 1.00 45.45 C
ATOM 18 C6 A A 346 109.153 -1.425 194.248 1.00 45.51 C
ATOM 19 N6 A A 346 109.068 -1.770 195.556 1.00 45.13 N
ATOM 20 N1 A A 346 108.170 -1.879 193.409 1.00 45.99 N
ATOM 21 C2 A A 346 108.257 -1.520 192.124 1.00 46.38 C
ATOM 22 N3 A A 346 109.175 -0.790 191.497 1.00 46.37 N
ATOM 23 C4 A A 346 110.142 -0.363 192.327 1.00 45.89 C
ATOM 24 P C A 347 112.619 2.148 186.560 1.00 46.94 P
ATOM 25 OP1 C A 347 111.461 1.610 185.765 1.00 47.46 O
ATOM 26 OP2 C A 347 113.944 1.464 186.439 1.00 46.82 O
ATOM 27 O5' C A 347 112.765 3.706 186.274 1.00 46.95 O
TER
ATOM 1 O3' U B 340 116.625 0.092 204.105 1.00 37.01 O
ATOM 2 P A B 341 117.035 -1.228 203.329 1.00 38.58 P
ATOM 3 OP1 A B 341 117.943 -2.023 204.218 1.00 38.26 O
ATOM 4 OP2 A B 341 117.528 -0.836 201.981 1.00 38.85 O
ATOM 5 O5' A B 341 115.661 -1.950 203.226 1.00 38.86 O
ATOM 6 C5' A B 341 115.194 -2.756 204.276 1.00 38.71 C
ATOM 7 C4' A B 341 113.971 -3.462 203.844 1.00 39.07 C
ATOM 8 O4' A B 341 113.083 -2.504 203.227 1.00 39.31 O
ATOM 9 C3' A B 341 114.178 -4.467 202.758 1.00 39.41 C
ATOM 10 O3' A B 341 114.723 -5.697 203.214 1.00 39.31 O
ATOM 11 C2' A B 341 112.788 -4.565 202.150 1.00 39.82 C
ATOM 12 O2' A B 341 111.922 -5.291 203.009 1.00 39.78 O
ATOM 13 C1' A B 341 112.362 -3.106 202.201 1.00 39.76 C
ATOM 14 N9 A B 341 112.649 -2.377 200.966 1.00 40.00 N
ATOM 15 C8 A B 341 113.499 -1.358 200.892 1.00 39.81 C
ATOM 16 N7 A B 341 113.555 -0.812 199.708 1.00 40.11 N
ATOM 17 C5 A B 341 112.632 -1.501 198.967 1.00 40.52 C
ATOM 18 C6 A B 341 112.265 -1.405 197.636 1.00 40.98 C
ATOM 19 N6 A B 341 112.746 -0.538 196.767 1.00 41.11 N
ATOM 20 N1 A B 341 111.358 -2.277 197.209 1.00 41.32 N
ATOM 21 C2 A B 341 110.866 -3.172 198.069 1.00 41.21 C
ATOM 22 N3 A B 341 111.155 -3.350 199.334 1.00 40.80 N
ATOM 23 C4 A B 341 112.059 -2.465 199.729 1.00 40.46 C
ATOM 24 P G B 342 115.865 -6.381 202.321 1.00 43.19 P
ATOM 25 OP1 G B 342 116.134 -7.749 202.867 1.00 43.13 O
ATOM 26 OP2 G B 342 116.951 -5.418 202.243 1.00 42.96 O
ATOM 27 O5' G B 342 115.166 -6.474 200.877 1.00 43.72 O
TER
Atoms:
OP1: (115.124,1.830,193.163)
OP2: (115.940,-0.432,192.343)
C3': (113.068,1.951,189.204)
C1': (111.565,0.849,190.642)
C5': (114.783,0.223,189.892)
O4': (112.441,-0.120,190.136)
C8: (111.898,0.561,193.202)
O2': (111.398,3.238,190.423)
C6: (109.153,-1.425,194.248)
C5: (110.202,-0.618,193.689)
C4: (110.142,-0.363,192.327)
P: (115.816,1.011,192.138)
C4': (113.439,0.491,189.299)
C2': (112.303,2.173,190.501)
C2: (108.257,-1.520,192.124)
N1: (108.170,-1.879,193.409)
N3: (109.175,-0.790,191.497)
N6: (109.068,-1.770,195.556)
N7: (111.323,-0.007,194.235)
N9: (111.218,0.436,192.013)
O5': (115.171,1.285,190.726)
O3': (112.157,2.138,188.121)
OP2: (115.940,-0.432,192.343)
C3': (113.068,1.951,189.204)
C1': (111.565,0.849,190.642)
C5': (114.783,0.223,189.892)
O4': (112.441,-0.120,190.136)
C8: (111.898,0.561,193.202)
O2': (111.398,3.238,190.423)
C6: (109.153,-1.425,194.248)
C5: (110.202,-0.618,193.689)
C4: (110.142,-0.363,192.327)
P: (115.816,1.011,192.138)
C4': (113.439,0.491,189.299)
C2': (112.303,2.173,190.501)
C2: (108.257,-1.520,192.124)
N1: (108.170,-1.879,193.409)
N3: (109.175,-0.790,191.497)
N6: (109.068,-1.770,195.556)
N7: (111.323,-0.007,194.235)
N9: (111.218,0.436,192.013)
O5': (115.171,1.285,190.726)
O3': (112.157,2.138,188.121)
OP1: (117.943,-2.023,204.218)
OP2: (117.528,-0.836,201.981)
C3': (114.178,-4.467,202.758)
C1': (112.362,-3.106,202.201)
C5': (115.194,-2.756,204.276)
O4': (113.083,-2.504,203.227)
C8: (113.499,-1.358,200.892)
O2': (111.922,-5.291,203.009)
C6: (112.265,-1.405,197.636)
C5: (112.632,-1.501,198.967)
C4: (112.059,-2.465,199.729)
P: (117.035,-1.228,203.329)
C4': (113.971,-3.462,203.844)
C2': (112.788,-4.565,202.150)
C2: (110.866,-3.172,198.069)
N1: (111.358,-2.277,197.209)
N3: (111.155,-3.350,199.334)
N6: (112.746,-0.538,196.767)
N7: (113.555,-0.812,199.708)
N9: (112.649,-2.377,200.966)
O5': (115.661,-1.950,203.226)
O3': (114.723,-5.697,203.214)
OP2: (117.528,-0.836,201.981)
C3': (114.178,-4.467,202.758)
C1': (112.362,-3.106,202.201)
C5': (115.194,-2.756,204.276)
O4': (113.083,-2.504,203.227)
C8: (113.499,-1.358,200.892)
O2': (111.922,-5.291,203.009)
C6: (112.265,-1.405,197.636)
C5: (112.632,-1.501,198.967)
C4: (112.059,-2.465,199.729)
P: (117.035,-1.228,203.329)
C4': (113.971,-3.462,203.844)
C2': (112.788,-4.565,202.150)
C2: (110.866,-3.172,198.069)
N1: (111.358,-2.277,197.209)
N3: (111.155,-3.350,199.334)
N6: (112.746,-0.538,196.767)
N7: (113.555,-0.812,199.708)
N9: (112.649,-2.377,200.966)
O5': (115.661,-1.950,203.226)
O3': (114.723,-5.697,203.214)
Image (generated by PyMOL):