ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2D2L:C8:D9

Extra

PDB:
ATOM 1 O3' A A 7 30.551 17.018 33.541 1.00 61.82 O
ATOM 2 P A A 8 31.733 16.120 34.144 1.00 67.96 P
ATOM 3 OP1 A A 8 32.202 15.218 33.073 1.00 67.44 O
ATOM 4 OP2 A A 8 31.281 15.556 35.446 1.00 64.67 O
ATOM 5 O5' A A 8 32.882 17.177 34.416 1.00 62.12 O
ATOM 6 C5' A A 8 33.272 18.068 33.389 1.00 62.47 C
ATOM 7 C4' A A 8 34.178 19.123 33.944 1.00 63.31 C
ATOM 8 O4' A A 8 33.413 19.999 34.808 1.00 61.78 O
ATOM 9 C3' A A 8 35.272 18.585 34.845 1.00 62.73 C
ATOM 10 O3' A A 8 36.388 18.138 34.101 1.00 58.65 O
ATOM 11 C2' A A 8 35.610 19.800 35.688 1.00 62.34 C
ATOM 12 O2' A A 8 36.433 20.712 34.993 1.00 66.87 O
ATOM 13 C1' A A 8 34.226 20.413 35.889 1.00 60.63 C
ATOM 14 N9 A A 8 33.617 19.943 37.124 1.00 56.05 N
ATOM 15 C8 A A 8 32.646 18.998 37.288 1.00 54.83 C
ATOM 16 N7 A A 8 32.312 18.800 38.539 1.00 53.45 N
ATOM 17 C5 A A 8 33.122 19.678 39.243 1.00 53.39 C
ATOM 18 C6 A A 8 33.250 19.958 40.616 1.00 50.54 C
ATOM 19 N6 A A 8 32.541 19.348 41.565 1.00 49.09 N
ATOM 20 N1 A A 8 34.146 20.897 40.984 1.00 52.78 N
ATOM 21 C2 A A 8 34.869 21.498 40.030 1.00 54.39 C
ATOM 22 N3 A A 8 34.842 21.316 38.713 1.00 54.13 N
ATOM 23 C4 A A 8 33.933 20.384 38.384 1.00 53.96 C
ATOM 24 P A A 9 37.290 16.946 34.678 1.00 59.16 P
ATOM 25 OP1 A A 9 38.398 16.715 33.716 1.00 64.18 O
ATOM 26 OP2 A A 9 36.386 15.828 35.047 1.00 59.02 O
ATOM 27 O5' A A 9 37.892 17.551 36.021 1.00 59.62 O
TER

ATOM 1 P A B 9 22.418 14.843 42.624 1.00 66.65 P
ATOM 2 OP1 A B 9 21.257 15.767 42.724 1.00 61.96 O
ATOM 3 OP2 A B 9 23.074 14.607 41.310 1.00 64.08 O
ATOM 4 O5' A B 9 23.521 15.298 43.670 1.00 61.08 O
ATOM 5 C5' A B 9 23.413 14.931 45.035 1.00 54.12 C
ATOM 6 C4' A B 9 24.682 15.287 45.764 1.00 52.95 C
ATOM 7 O4' A B 9 25.793 14.640 45.095 1.00 49.94 O
ATOM 8 C3' A B 9 25.052 16.760 45.754 1.00 52.18 C
ATOM 9 O3' A B 9 24.414 17.458 46.808 1.00 48.75 O
ATOM 10 C2' A B 9 26.556 16.711 45.962 1.00 47.14 C
ATOM 11 O2' A B 9 26.901 16.484 47.316 1.00 47.27 O
ATOM 12 C1' A B 9 26.925 15.488 45.126 1.00 45.74 C
ATOM 13 N9 A B 9 27.248 15.840 43.749 1.00 47.80 N
ATOM 14 C8 A B 9 26.539 15.530 42.616 1.00 43.45 C
ATOM 15 N7 A B 9 27.096 15.962 41.510 1.00 44.81 N
ATOM 16 C5 A B 9 28.244 16.610 41.946 1.00 43.61 C
ATOM 17 C6 A B 9 29.269 17.284 41.258 1.00 44.56 C
ATOM 18 N6 A B 9 29.302 17.427 39.927 1.00 44.91 N
ATOM 19 N1 A B 9 30.272 17.813 41.991 1.00 47.36 N
ATOM 20 C2 A B 9 30.232 17.677 43.325 1.00 49.75 C
ATOM 21 N3 A B 9 29.322 17.072 44.085 1.00 47.14 N
ATOM 22 C4 A B 9 28.346 16.550 43.323 1.00 45.92 C
ATOM 23 P U B 10 23.734 18.878 46.508 1.00 53.98 P
ATOM 24 OP1 U B 10 23.048 19.303 47.758 1.00 46.21 O
ATOM 25 OP2 U B 10 22.965 18.736 45.236 1.00 47.73 O
ATOM 26 O5' U B 10 24.958 19.865 46.233 1.00 50.97 O
TER

Atoms:
OP1: (32.202,15.218,33.073)
OP2: (31.281,15.556,35.446)
C3': (35.272,18.585,34.845)
C1': (34.226,20.413,35.889)
C5': (33.272,18.068,33.389)
O4': (33.413,19.999,34.808)
C8: (32.646,18.998,37.288)
O2': (36.433,20.712,34.993)
C6: (33.250,19.958,40.616)
C5: (33.122,19.678,39.243)
C4: (33.933,20.384,38.384)
P: (31.733,16.120,34.144)
C4': (34.178,19.123,33.944)
C2': (35.610,19.800,35.688)
C2: (34.869,21.498,40.030)
N1: (34.146,20.897,40.984)
N3: (34.842,21.316,38.713)
N6: (32.541,19.348,41.565)
N7: (32.312,18.800,38.539)
N9: (33.617,19.943,37.124)
O5': (32.882,17.177,34.416)
O3': (36.388,18.138,34.101)
OP1: (21.257,15.767,42.724)
OP2: (23.074,14.607,41.310)
C3': (25.052,16.760,45.754)
C1': (26.925,15.488,45.126)
C5': (23.413,14.931,45.035)
O4': (25.793,14.640,45.095)
C8: (26.539,15.530,42.616)
O2': (26.901,16.484,47.316)
C6: (29.269,17.284,41.258)
C5: (28.244,16.610,41.946)
C4: (28.346,16.550,43.323)
P: (22.418,14.843,42.624)
C4': (24.682,15.287,45.764)
C2': (26.556,16.711,45.962)
C2: (30.232,17.677,43.325)
N1: (30.272,17.813,41.991)
N3: (29.322,17.072,44.085)
N6: (29.302,17.427,39.927)
N7: (27.096,15.962,41.510)
N9: (27.248,15.840,43.749)
O5': (23.521,15.298,43.670)
O3': (24.414,17.458,46.808)
Image (generated by PyMOL):
PyMOL image
show in jmol