Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0999:01253
Extra
PDB:
ATOM 1 O3' G A 998 43.345 94.302 67.292 1.00 22.27 O
ATOM 2 P A A 999 44.930 94.132 67.541 1.00 25.68 P
ATOM 3 OP1 A A 999 45.441 95.485 67.864 1.00 26.39 O
ATOM 4 OP2 A A 999 45.527 93.374 66.411 1.00 26.28 O
ATOM 5 O5' A A 999 45.035 93.199 68.833 1.00 24.59 O
ATOM 6 C5' A A 999 45.357 93.738 70.131 1.00 20.98 C
ATOM 7 C4' A A 999 44.111 94.260 70.819 1.00 21.67 C
ATOM 8 O4' A A 999 43.146 93.189 71.056 1.00 24.37 O
ATOM 9 C3' A A 999 44.389 94.820 72.200 1.00 20.76 C
ATOM 10 O3' A A 999 44.847 96.159 72.074 1.00 22.63 O
ATOM 11 C2' A A 999 43.025 94.707 72.871 1.00 19.25 C
ATOM 12 O2' A A 999 42.112 95.673 72.430 1.00 22.73 O
ATOM 13 C1' A A 999 42.526 93.371 72.325 1.00 19.04 C
ATOM 14 N9 A A 999 42.885 92.247 73.199 1.00 18.18 N
ATOM 15 C8 A A 999 43.714 91.184 72.928 1.00 16.90 C
ATOM 16 N7 A A 999 43.860 90.356 73.939 1.00 17.06 N
ATOM 17 C5 A A 999 43.068 90.904 74.937 1.00 14.23 C
ATOM 18 C6 A A 999 42.801 90.504 76.261 1.00 15.33 C
ATOM 19 N6 A A 999 43.302 89.401 76.819 1.00 15.82 N
ATOM 20 N1 A A 999 41.990 91.284 77.000 1.00 12.70 N
ATOM 21 C2 A A 999 41.468 92.380 76.434 1.00 15.24 C
ATOM 22 N3 A A 999 41.630 92.853 75.198 1.00 15.16 N
ATOM 23 C4 A A 999 42.457 92.063 74.495 1.00 14.96 C
ATOM 24 P U A1000 46.279 96.593 72.672 1.00 20.78 P
ATOM 25 OP1 U A1000 46.536 97.929 72.103 1.00 20.12 O
ATOM 26 OP2 U A1000 47.275 95.499 72.487 1.00 18.27 O
ATOM 27 O5' U A1000 46.031 96.788 74.231 1.00 20.39 O
TER
ATOM 1 O3' U B1252 37.785 103.010 82.248 1.00 24.32 O
ATOM 2 P A B1253 37.819 102.817 80.660 1.00 24.53 P
ATOM 3 OP1 A B1253 38.216 104.143 80.143 1.00 24.32 O
ATOM 4 OP2 A B1253 36.541 102.204 80.220 1.00 26.15 O
ATOM 5 O5' A B1253 39.008 101.781 80.410 1.00 23.13 O
ATOM 6 C5' A B1253 40.365 102.153 80.666 1.00 17.20 C
ATOM 7 C4' A B1253 41.302 101.071 80.212 1.00 18.98 C
ATOM 8 O4' A B1253 41.247 99.932 81.108 1.00 23.36 O
ATOM 9 C3' A B1253 41.024 100.489 78.841 1.00 21.12 C
ATOM 10 O3' A B1253 41.562 101.336 77.834 1.00 22.95 O
ATOM 11 C2' A B1253 41.754 99.157 78.920 1.00 22.50 C
ATOM 12 O2' A B1253 43.145 99.314 78.798 1.00 24.63 O
ATOM 13 C1' A B1253 41.470 98.739 80.366 1.00 24.76 C
ATOM 14 N9 A B1253 40.294 97.869 80.490 1.00 26.59 N
ATOM 15 C8 A B1253 39.023 98.212 80.882 1.00 25.43 C
ATOM 16 N7 A B1253 38.183 97.210 80.877 1.00 27.01 N
ATOM 17 C5 A B1253 38.949 96.131 80.457 1.00 24.93 C
ATOM 18 C6 A B1253 38.639 94.772 80.246 1.00 26.46 C
ATOM 19 N6 A B1253 37.424 94.246 80.446 1.00 26.55 N
ATOM 20 N1 A B1253 39.631 93.961 79.822 1.00 25.74 N
ATOM 21 C2 A B1253 40.844 94.485 79.631 1.00 25.84 C
ATOM 22 N3 A B1253 41.258 95.739 79.801 1.00 26.86 N
ATOM 23 C4 A B1253 40.250 96.521 80.219 1.00 24.57 C
ATOM 24 P G B1254 40.746 101.593 76.472 1.00 22.50 P
ATOM 25 OP1 G B1254 41.728 102.192 75.527 1.00 25.82 O
ATOM 26 OP2 G B1254 39.482 102.314 76.762 1.00 20.11 O
ATOM 27 O5' G B1254 40.404 100.130 75.942 1.00 23.64 O
TER
ATOM 2 P A A 999 44.930 94.132 67.541 1.00 25.68 P
ATOM 3 OP1 A A 999 45.441 95.485 67.864 1.00 26.39 O
ATOM 4 OP2 A A 999 45.527 93.374 66.411 1.00 26.28 O
ATOM 5 O5' A A 999 45.035 93.199 68.833 1.00 24.59 O
ATOM 6 C5' A A 999 45.357 93.738 70.131 1.00 20.98 C
ATOM 7 C4' A A 999 44.111 94.260 70.819 1.00 21.67 C
ATOM 8 O4' A A 999 43.146 93.189 71.056 1.00 24.37 O
ATOM 9 C3' A A 999 44.389 94.820 72.200 1.00 20.76 C
ATOM 10 O3' A A 999 44.847 96.159 72.074 1.00 22.63 O
ATOM 11 C2' A A 999 43.025 94.707 72.871 1.00 19.25 C
ATOM 12 O2' A A 999 42.112 95.673 72.430 1.00 22.73 O
ATOM 13 C1' A A 999 42.526 93.371 72.325 1.00 19.04 C
ATOM 14 N9 A A 999 42.885 92.247 73.199 1.00 18.18 N
ATOM 15 C8 A A 999 43.714 91.184 72.928 1.00 16.90 C
ATOM 16 N7 A A 999 43.860 90.356 73.939 1.00 17.06 N
ATOM 17 C5 A A 999 43.068 90.904 74.937 1.00 14.23 C
ATOM 18 C6 A A 999 42.801 90.504 76.261 1.00 15.33 C
ATOM 19 N6 A A 999 43.302 89.401 76.819 1.00 15.82 N
ATOM 20 N1 A A 999 41.990 91.284 77.000 1.00 12.70 N
ATOM 21 C2 A A 999 41.468 92.380 76.434 1.00 15.24 C
ATOM 22 N3 A A 999 41.630 92.853 75.198 1.00 15.16 N
ATOM 23 C4 A A 999 42.457 92.063 74.495 1.00 14.96 C
ATOM 24 P U A1000 46.279 96.593 72.672 1.00 20.78 P
ATOM 25 OP1 U A1000 46.536 97.929 72.103 1.00 20.12 O
ATOM 26 OP2 U A1000 47.275 95.499 72.487 1.00 18.27 O
ATOM 27 O5' U A1000 46.031 96.788 74.231 1.00 20.39 O
TER
ATOM 1 O3' U B1252 37.785 103.010 82.248 1.00 24.32 O
ATOM 2 P A B1253 37.819 102.817 80.660 1.00 24.53 P
ATOM 3 OP1 A B1253 38.216 104.143 80.143 1.00 24.32 O
ATOM 4 OP2 A B1253 36.541 102.204 80.220 1.00 26.15 O
ATOM 5 O5' A B1253 39.008 101.781 80.410 1.00 23.13 O
ATOM 6 C5' A B1253 40.365 102.153 80.666 1.00 17.20 C
ATOM 7 C4' A B1253 41.302 101.071 80.212 1.00 18.98 C
ATOM 8 O4' A B1253 41.247 99.932 81.108 1.00 23.36 O
ATOM 9 C3' A B1253 41.024 100.489 78.841 1.00 21.12 C
ATOM 10 O3' A B1253 41.562 101.336 77.834 1.00 22.95 O
ATOM 11 C2' A B1253 41.754 99.157 78.920 1.00 22.50 C
ATOM 12 O2' A B1253 43.145 99.314 78.798 1.00 24.63 O
ATOM 13 C1' A B1253 41.470 98.739 80.366 1.00 24.76 C
ATOM 14 N9 A B1253 40.294 97.869 80.490 1.00 26.59 N
ATOM 15 C8 A B1253 39.023 98.212 80.882 1.00 25.43 C
ATOM 16 N7 A B1253 38.183 97.210 80.877 1.00 27.01 N
ATOM 17 C5 A B1253 38.949 96.131 80.457 1.00 24.93 C
ATOM 18 C6 A B1253 38.639 94.772 80.246 1.00 26.46 C
ATOM 19 N6 A B1253 37.424 94.246 80.446 1.00 26.55 N
ATOM 20 N1 A B1253 39.631 93.961 79.822 1.00 25.74 N
ATOM 21 C2 A B1253 40.844 94.485 79.631 1.00 25.84 C
ATOM 22 N3 A B1253 41.258 95.739 79.801 1.00 26.86 N
ATOM 23 C4 A B1253 40.250 96.521 80.219 1.00 24.57 C
ATOM 24 P G B1254 40.746 101.593 76.472 1.00 22.50 P
ATOM 25 OP1 G B1254 41.728 102.192 75.527 1.00 25.82 O
ATOM 26 OP2 G B1254 39.482 102.314 76.762 1.00 20.11 O
ATOM 27 O5' G B1254 40.404 100.130 75.942 1.00 23.64 O
TER
Atoms:
OP1: (45.441,95.485,67.864)
OP2: (45.527,93.374,66.411)
C3': (44.389,94.820,72.200)
C1': (42.526,93.371,72.325)
C5': (45.357,93.738,70.131)
O4': (43.146,93.189,71.056)
C8: (43.714,91.184,72.928)
O2': (42.112,95.673,72.430)
C6: (42.801,90.504,76.261)
C5: (43.068,90.904,74.937)
C4: (42.457,92.063,74.495)
P: (44.930,94.132,67.541)
C4': (44.111,94.260,70.819)
C2': (43.025,94.707,72.871)
C2: (41.468,92.380,76.434)
N1: (41.990,91.284,77.000)
N3: (41.630,92.853,75.198)
N6: (43.302,89.401,76.819)
N7: (43.860,90.356,73.939)
N9: (42.885,92.247,73.199)
O5': (45.035,93.199,68.833)
O3': (44.847,96.159,72.074)
OP2: (45.527,93.374,66.411)
C3': (44.389,94.820,72.200)
C1': (42.526,93.371,72.325)
C5': (45.357,93.738,70.131)
O4': (43.146,93.189,71.056)
C8: (43.714,91.184,72.928)
O2': (42.112,95.673,72.430)
C6: (42.801,90.504,76.261)
C5: (43.068,90.904,74.937)
C4: (42.457,92.063,74.495)
P: (44.930,94.132,67.541)
C4': (44.111,94.260,70.819)
C2': (43.025,94.707,72.871)
C2: (41.468,92.380,76.434)
N1: (41.990,91.284,77.000)
N3: (41.630,92.853,75.198)
N6: (43.302,89.401,76.819)
N7: (43.860,90.356,73.939)
N9: (42.885,92.247,73.199)
O5': (45.035,93.199,68.833)
O3': (44.847,96.159,72.074)
OP1: (38.216,104.143,80.143)
OP2: (36.541,102.204,80.220)
C3': (41.024,100.489,78.841)
C1': (41.470,98.739,80.366)
C5': (40.365,102.153,80.666)
O4': (41.247,99.932,81.108)
C8: (39.023,98.212,80.882)
O2': (43.145,99.314,78.798)
C6: (38.639,94.772,80.246)
C5: (38.949,96.131,80.457)
C4: (40.250,96.521,80.219)
P: (37.819,102.817,80.660)
C4': (41.302,101.071,80.212)
C2': (41.754,99.157,78.920)
C2: (40.844,94.485,79.631)
N1: (39.631,93.961,79.822)
N3: (41.258,95.739,79.801)
N6: (37.424,94.246,80.446)
N7: (38.183,97.210,80.877)
N9: (40.294,97.869,80.490)
O5': (39.008,101.781,80.410)
O3': (41.562,101.336,77.834)
OP2: (36.541,102.204,80.220)
C3': (41.024,100.489,78.841)
C1': (41.470,98.739,80.366)
C5': (40.365,102.153,80.666)
O4': (41.247,99.932,81.108)
C8: (39.023,98.212,80.882)
O2': (43.145,99.314,78.798)
C6: (38.639,94.772,80.246)
C5: (38.949,96.131,80.457)
C4: (40.250,96.521,80.219)
P: (37.819,102.817,80.660)
C4': (41.302,101.071,80.212)
C2': (41.754,99.157,78.920)
C2: (40.844,94.485,79.631)
N1: (39.631,93.961,79.822)
N3: (41.258,95.739,79.801)
N6: (37.424,94.246,80.446)
N7: (38.183,97.210,80.877)
N9: (40.294,97.869,80.490)
O5': (39.008,101.781,80.410)
O3': (41.562,101.336,77.834)
Image (generated by PyMOL):