ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A2269:A2417

Extra

PDB:
ATOM 1 O3' U A2268 81.787 -41.246 -17.948 1.00 33.38 O
ATOM 2 P A A2269 81.836 -42.824 -17.591 1.00 31.61 P
ATOM 3 OP1 A A2269 82.561 -42.955 -16.310 1.00 29.69 O
ATOM 4 OP2 A A2269 82.343 -43.566 -18.774 1.00 33.96 O
ATOM 5 O5' A A2269 80.309 -43.139 -17.390 1.00 42.02 O
ATOM 6 C5' A A2269 79.738 -43.029 -16.113 1.00 42.38 C
ATOM 7 C4' A A2269 78.692 -41.959 -16.041 1.00 39.00 C
ATOM 8 O4' A A2269 78.258 -41.879 -14.676 1.00 45.79 O
ATOM 9 C3' A A2269 79.167 -40.563 -16.353 1.00 31.55 C
ATOM 10 O3' A A2269 78.005 -39.744 -16.453 1.00 39.06 O
ATOM 11 C2' A A2269 79.888 -40.192 -15.064 1.00 32.23 C
ATOM 12 O2' A A2269 79.903 -38.805 -14.813 1.00 32.43 O
ATOM 13 C1' A A2269 79.057 -40.931 -13.995 1.00 40.00 C
ATOM 14 N9 A A2269 79.863 -41.683 -13.034 1.00 35.64 N
ATOM 15 C8 A A2269 80.003 -43.042 -13.046 1.00 34.45 C
ATOM 16 N7 A A2269 80.731 -43.530 -12.092 1.00 38.11 N
ATOM 17 C5 A A2269 81.083 -42.407 -11.397 1.00 41.21 C
ATOM 18 C6 A A2269 81.864 -42.272 -10.262 1.00 47.37 C
ATOM 19 N6 A A2269 82.417 -43.318 -9.663 1.00 50.30 N
ATOM 20 N1 A A2269 82.037 -41.024 -9.785 1.00 56.92 N
ATOM 21 C2 A A2269 81.455 -39.995 -10.431 1.00 48.37 C
ATOM 22 N3 A A2269 80.697 -40.000 -11.522 1.00 40.61 N
ATOM 23 C4 A A2269 80.553 -41.259 -11.950 1.00 40.71 C
ATOM 24 P C A2270 77.764 -38.682 -17.641 1.00 31.12 P
ATOM 25 OP1 C A2270 78.652 -39.031 -18.791 1.00 26.33 O
ATOM 26 OP2 C A2270 77.872 -37.338 -17.012 1.00 18.99 O
ATOM 27 O5' C A2270 76.259 -38.999 -18.024 1.00 37.66 O
TER

ATOM 1 O3' C B2416 77.317 -42.228 -11.051 1.00 33.09 O
ATOM 2 P A B2417 76.577 -40.837 -10.729 1.00 28.44 P
ATOM 3 OP1 A B2417 77.460 -39.739 -11.192 1.00 34.88 O
ATOM 4 OP2 A B2417 76.181 -40.871 -9.315 1.00 38.64 O
ATOM 5 O5' A B2417 75.294 -40.904 -11.639 1.00 32.49 O
ATOM 6 C5' A B2417 75.399 -41.054 -13.047 1.00 38.16 C
ATOM 7 C4' A B2417 74.034 -41.162 -13.667 1.00 29.32 C
ATOM 8 O4' A B2417 73.368 -42.334 -13.143 1.00 17.39 O
ATOM 9 C3' A B2417 73.095 -40.017 -13.348 1.00 25.23 C
ATOM 10 O3' A B2417 73.256 -38.927 -14.248 1.00 27.03 O
ATOM 11 C2' A B2417 71.735 -40.670 -13.448 1.00 30.27 C
ATOM 12 O2' A B2417 71.337 -40.769 -14.808 1.00 44.38 O
ATOM 13 C1' A B2417 72.021 -42.075 -12.937 1.00 26.81 C
ATOM 14 N9 A B2417 71.720 -42.220 -11.507 1.00 26.04 N
ATOM 15 C8 A B2417 72.573 -42.084 -10.464 1.00 31.89 C
ATOM 16 N7 A B2417 72.018 -42.258 -9.286 1.00 29.38 N
ATOM 17 C5 A B2417 70.696 -42.536 -9.581 1.00 29.93 C
ATOM 18 C6 A B2417 69.603 -42.811 -8.735 1.00 34.30 C
ATOM 19 N6 A B2417 69.700 -42.846 -7.405 1.00 32.19 N
ATOM 20 N1 A B2417 68.414 -43.047 -9.318 1.00 30.43 N
ATOM 21 C2 A B2417 68.391 -42.993 -10.660 1.00 27.67 C
ATOM 22 N3 A B2417 69.335 -42.762 -11.568 1.00 23.50 N
ATOM 23 C4 A B2417 70.496 -42.526 -10.948 1.00 29.05 C
ATOM 24 P G B2418 73.258 -37.395 -13.732 1.00 32.23 P
ATOM 25 OP1 G B2418 73.125 -36.525 -14.943 1.00 30.29 O
ATOM 26 OP2 G B2418 74.441 -37.210 -12.856 1.00 27.56 O
ATOM 27 O5' G B2418 71.937 -37.319 -12.859 1.00 27.12 O
TER

Atoms:
OP1: (82.561,-42.955,-16.310)
OP2: (82.343,-43.566,-18.774)
C3': (79.167,-40.563,-16.353)
C1': (79.057,-40.931,-13.995)
C5': (79.738,-43.029,-16.113)
O4': (78.258,-41.879,-14.676)
C8: (80.003,-43.042,-13.046)
O2': (79.903,-38.805,-14.813)
C6: (81.864,-42.272,-10.262)
C5: (81.083,-42.407,-11.397)
C4: (80.553,-41.259,-11.950)
P: (81.836,-42.824,-17.591)
C4': (78.692,-41.959,-16.041)
C2': (79.888,-40.192,-15.064)
C2: (81.455,-39.995,-10.431)
N1: (82.037,-41.024,-9.785)
N3: (80.697,-40.000,-11.522)
N6: (82.417,-43.318,-9.663)
N7: (80.731,-43.530,-12.092)
N9: (79.863,-41.683,-13.034)
O5': (80.309,-43.139,-17.390)
O3': (78.005,-39.744,-16.453)
OP1: (77.460,-39.739,-11.192)
OP2: (76.181,-40.871,-9.315)
C3': (73.095,-40.017,-13.348)
C1': (72.021,-42.075,-12.937)
C5': (75.399,-41.054,-13.047)
O4': (73.368,-42.334,-13.143)
C8: (72.573,-42.084,-10.464)
O2': (71.337,-40.769,-14.808)
C6: (69.603,-42.811,-8.735)
C5: (70.696,-42.536,-9.581)
C4: (70.496,-42.526,-10.948)
P: (76.577,-40.837,-10.729)
C4': (74.034,-41.162,-13.667)
C2': (71.735,-40.670,-13.448)
C2: (68.391,-42.993,-10.660)
N1: (68.414,-43.047,-9.318)
N3: (69.335,-42.762,-11.568)
N6: (69.700,-42.846,-7.405)
N7: (72.018,-42.258,-9.286)
N9: (71.720,-42.220,-11.507)
O5': (75.294,-40.904,-11.639)
O3': (73.256,-38.927,-14.248)
Image (generated by PyMOL):
PyMOL image
show in jmol