ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:0999:01253

Extra

PDB:
ATOM 1 O3' G A 998 43.399 94.789 67.309 1.00 35.02 O
ATOM 2 P A A 999 44.966 94.578 67.596 1.00 37.87 P
ATOM 3 OP1 A A 999 45.505 95.933 67.851 1.00 36.19 O
ATOM 4 OP2 A A 999 45.562 93.734 66.533 1.00 38.42 O
ATOM 5 O5' A A 999 45.008 93.709 68.928 1.00 35.26 O
ATOM 6 C5' A A 999 45.354 94.295 70.187 1.00 32.62 C
ATOM 7 C4' A A 999 44.116 94.803 70.882 1.00 31.87 C
ATOM 8 O4' A A 999 43.176 93.720 71.133 1.00 32.82 O
ATOM 9 C3' A A 999 44.387 95.382 72.250 1.00 31.26 C
ATOM 10 O3' A A 999 44.843 96.717 72.118 1.00 32.38 O
ATOM 11 C2' A A 999 43.023 95.275 72.915 1.00 30.80 C
ATOM 12 O2' A A 999 42.141 96.282 72.472 1.00 32.01 O
ATOM 13 C1' A A 999 42.542 93.918 72.390 1.00 29.49 C
ATOM 14 N9 A A 999 42.913 92.803 73.269 1.00 27.22 N
ATOM 15 C8 A A 999 43.771 91.767 72.994 1.00 25.44 C
ATOM 16 N7 A A 999 43.918 90.923 73.987 1.00 23.92 N
ATOM 17 C5 A A 999 43.100 91.433 74.983 1.00 24.03 C
ATOM 18 C6 A A 999 42.829 91.006 76.297 1.00 23.83 C
ATOM 19 N6 A A 999 43.356 89.913 76.848 1.00 24.19 N
ATOM 20 N1 A A 999 41.988 91.752 77.036 1.00 23.63 N
ATOM 21 C2 A A 999 41.449 92.843 76.486 1.00 25.56 C
ATOM 22 N3 A A 999 41.619 93.345 75.263 1.00 27.00 N
ATOM 23 C4 A A 999 42.471 92.587 74.555 1.00 25.67 C
ATOM 24 P U A1000 46.280 97.140 72.710 1.00 32.56 P
ATOM 25 OP1 U A1000 46.569 98.443 72.083 1.00 31.93 O
ATOM 26 OP2 U A1000 47.251 96.016 72.565 1.00 27.32 O
ATOM 27 O5' U A1000 46.017 97.380 74.261 1.00 28.21 O
TER

ATOM 1 O3' U B1252 37.741 103.489 82.224 1.00 31.74 O
ATOM 2 P A B1253 37.743 103.294 80.635 1.00 33.92 P
ATOM 3 OP1 A B1253 38.107 104.614 80.077 1.00 33.04 O
ATOM 4 OP2 A B1253 36.455 102.649 80.243 1.00 34.76 O
ATOM 5 O5' A B1253 38.948 102.290 80.356 1.00 30.76 O
ATOM 6 C5' A B1253 40.301 102.725 80.519 1.00 30.25 C
ATOM 7 C4' A B1253 41.260 101.623 80.160 1.00 29.47 C
ATOM 8 O4' A B1253 41.166 100.539 81.112 1.00 31.05 O
ATOM 9 C3' A B1253 41.039 100.965 78.820 1.00 30.20 C
ATOM 10 O3' A B1253 41.622 101.756 77.797 1.00 33.89 O
ATOM 11 C2' A B1253 41.768 99.643 79.004 1.00 31.60 C
ATOM 12 O2' A B1253 43.164 99.777 78.905 1.00 31.64 O
ATOM 13 C1' A B1253 41.430 99.309 80.457 1.00 31.64 C
ATOM 14 N9 A B1253 40.247 98.453 80.578 1.00 33.52 N
ATOM 15 C8 A B1253 38.980 98.816 80.973 1.00 32.73 C
ATOM 16 N7 A B1253 38.120 97.832 80.950 1.00 33.67 N
ATOM 17 C5 A B1253 38.868 96.744 80.519 1.00 32.07 C
ATOM 18 C6 A B1253 38.530 95.404 80.279 1.00 32.07 C
ATOM 19 N6 A B1253 37.299 94.907 80.441 1.00 31.84 N
ATOM 20 N1 A B1253 39.509 94.577 79.859 1.00 32.34 N
ATOM 21 C2 A B1253 40.735 95.075 79.687 1.00 33.36 C
ATOM 22 N3 A B1253 41.174 96.315 79.873 1.00 33.55 N
ATOM 23 C4 A B1253 40.179 97.110 80.295 1.00 31.95 C
ATOM 24 P G B1254 40.806 102.053 76.445 1.00 33.90 P
ATOM 25 OP1 G B1254 41.787 102.683 75.531 1.00 33.58 O
ATOM 26 OP2 G B1254 39.542 102.759 76.762 1.00 28.84 O
ATOM 27 O5' G B1254 40.455 100.606 75.886 1.00 32.26 O
TER

Atoms:
OP1: (45.505,95.933,67.851)
OP2: (45.562,93.734,66.533)
C3': (44.387,95.382,72.250)
C1': (42.542,93.918,72.390)
C5': (45.354,94.295,70.187)
O4': (43.176,93.720,71.133)
C8: (43.771,91.767,72.994)
O2': (42.141,96.282,72.472)
C6: (42.829,91.006,76.297)
C5: (43.100,91.433,74.983)
C4: (42.471,92.587,74.555)
P: (44.966,94.578,67.596)
C4': (44.116,94.803,70.882)
C2': (43.023,95.275,72.915)
C2: (41.449,92.843,76.486)
N1: (41.988,91.752,77.036)
N3: (41.619,93.345,75.263)
N6: (43.356,89.913,76.848)
N7: (43.918,90.923,73.987)
N9: (42.913,92.803,73.269)
O5': (45.008,93.709,68.928)
O3': (44.843,96.717,72.118)
OP1: (38.107,104.614,80.077)
OP2: (36.455,102.649,80.243)
C3': (41.039,100.965,78.820)
C1': (41.430,99.309,80.457)
C5': (40.301,102.725,80.519)
O4': (41.166,100.539,81.112)
C8: (38.980,98.816,80.973)
O2': (43.164,99.777,78.905)
C6: (38.530,95.404,80.279)
C5: (38.868,96.744,80.519)
C4: (40.179,97.110,80.295)
P: (37.743,103.294,80.635)
C4': (41.260,101.623,80.160)
C2': (41.768,99.643,79.004)
C2: (40.735,95.075,79.687)
N1: (39.509,94.577,79.859)
N3: (41.174,96.315,79.873)
N6: (37.299,94.907,80.441)
N7: (38.120,97.832,80.950)
N9: (40.247,98.453,80.578)
O5': (38.948,102.290,80.356)
O3': (41.622,101.756,77.797)
Image (generated by PyMOL):
PyMOL image
show in jmol