Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0942:979
Extra
PDB:
ATOM 1 O3' U A 941 55.676 71.037 108.514 1.00 33.13 O
ATOM 2 P A A 942 55.843 70.749 110.091 1.00 34.03 P
ATOM 3 OP1 A A 942 56.671 71.853 110.662 1.00 32.16 O
ATOM 4 OP2 A A 942 56.273 69.343 110.273 1.00 32.84 O
ATOM 5 O5' A A 942 54.375 70.915 110.678 1.00 32.52 O
ATOM 6 C5' A A 942 53.731 72.198 110.703 1.00 33.01 C
ATOM 7 C4' A A 942 52.400 72.092 111.398 1.00 36.03 C
ATOM 8 O4' A A 942 51.518 71.212 110.646 1.00 38.67 O
ATOM 9 C3' A A 942 52.449 71.450 112.769 1.00 37.15 C
ATOM 10 O3' A A 942 52.884 72.368 113.754 1.00 39.49 O
ATOM 11 C2' A A 942 51.010 70.989 112.954 1.00 37.50 C
ATOM 12 O2' A A 942 50.129 72.045 113.280 1.00 37.49 O
ATOM 13 C1' A A 942 50.683 70.491 111.545 1.00 37.49 C
ATOM 14 N9 A A 942 50.932 69.058 111.365 1.00 36.68 N
ATOM 15 C8 A A 942 51.971 68.454 110.700 1.00 36.00 C
ATOM 16 N7 A A 942 51.912 67.147 110.708 1.00 37.25 N
ATOM 17 C5 A A 942 50.760 66.867 111.431 1.00 36.97 C
ATOM 18 C6 A A 942 50.137 65.654 111.800 1.00 38.35 C
ATOM 19 N6 A A 942 50.614 64.441 111.495 1.00 37.27 N
ATOM 20 N1 A A 942 48.993 65.731 112.511 1.00 37.17 N
ATOM 21 C2 A A 942 48.523 66.938 112.837 1.00 36.81 C
ATOM 22 N3 A A 942 49.016 68.141 112.558 1.00 36.65 N
ATOM 23 C4 A A 942 50.148 68.035 111.841 1.00 36.46 C
ATOM 24 P G A 943 53.946 71.897 114.856 1.00 39.66 P
ATOM 25 OP1 G A 943 54.159 73.037 115.777 1.00 40.59 O
ATOM 26 OP2 G A 943 55.102 71.297 114.160 1.00 38.84 O
ATOM 27 O5' G A 943 53.182 70.730 115.629 1.00 40.90 O
TER
ATOM 1 O3' U B 78 43.608 69.309 124.318 1.00 48.31 O
ATOM 2 P A B 79 43.814 70.477 123.234 1.00 48.67 P
ATOM 3 OP1 A B 79 44.284 71.674 123.975 1.00 46.67 O
ATOM 4 OP2 A B 79 42.572 70.566 122.413 1.00 47.89 O
ATOM 5 O5' A B 79 45.005 69.932 122.321 1.00 46.85 O
ATOM 6 C5' A B 79 46.329 69.772 122.865 1.00 44.24 C
ATOM 7 C4' A B 79 47.309 69.341 121.793 1.00 44.19 C
ATOM 8 O4' A B 79 47.105 67.951 121.427 1.00 44.95 O
ATOM 9 C3' A B 79 47.258 70.073 120.466 1.00 44.36 C
ATOM 10 O3' A B 79 47.900 71.337 120.532 1.00 44.34 O
ATOM 11 C2' A B 79 47.995 69.104 119.549 1.00 44.63 C
ATOM 12 O2' A B 79 49.399 69.168 119.706 1.00 45.88 O
ATOM 13 C1' A B 79 47.495 67.756 120.075 1.00 44.11 C
ATOM 14 N9 A B 79 46.347 67.245 119.327 1.00 44.01 N
ATOM 15 C8 A B 79 45.026 67.211 119.716 1.00 45.63 C
ATOM 16 N7 A B 79 44.223 66.695 118.816 1.00 45.70 N
ATOM 17 C5 A B 79 45.069 66.364 117.764 1.00 45.08 C
ATOM 18 C6 A B 79 44.831 65.775 116.505 1.00 44.21 C
ATOM 19 N6 A B 79 43.624 65.392 116.082 1.00 42.41 N
ATOM 20 N1 A B 79 45.894 65.590 115.689 1.00 43.76 N
ATOM 21 C2 A B 79 47.107 65.968 116.119 1.00 43.03 C
ATOM 22 N3 A B 79 47.456 66.523 117.279 1.00 43.19 N
ATOM 23 C4 A B 79 46.380 66.698 118.065 1.00 43.82 C
ATOM 24 P C B 80 47.240 72.604 119.793 1.00 45.75 P
ATOM 25 OP1 C B 80 48.190 73.734 119.972 1.00 45.33 O
ATOM 26 OP2 C B 80 45.830 72.749 120.254 1.00 43.54 O
ATOM 27 O5' C B 80 47.217 72.184 118.253 1.00 44.17 O
TER
ATOM 2 P A A 942 55.843 70.749 110.091 1.00 34.03 P
ATOM 3 OP1 A A 942 56.671 71.853 110.662 1.00 32.16 O
ATOM 4 OP2 A A 942 56.273 69.343 110.273 1.00 32.84 O
ATOM 5 O5' A A 942 54.375 70.915 110.678 1.00 32.52 O
ATOM 6 C5' A A 942 53.731 72.198 110.703 1.00 33.01 C
ATOM 7 C4' A A 942 52.400 72.092 111.398 1.00 36.03 C
ATOM 8 O4' A A 942 51.518 71.212 110.646 1.00 38.67 O
ATOM 9 C3' A A 942 52.449 71.450 112.769 1.00 37.15 C
ATOM 10 O3' A A 942 52.884 72.368 113.754 1.00 39.49 O
ATOM 11 C2' A A 942 51.010 70.989 112.954 1.00 37.50 C
ATOM 12 O2' A A 942 50.129 72.045 113.280 1.00 37.49 O
ATOM 13 C1' A A 942 50.683 70.491 111.545 1.00 37.49 C
ATOM 14 N9 A A 942 50.932 69.058 111.365 1.00 36.68 N
ATOM 15 C8 A A 942 51.971 68.454 110.700 1.00 36.00 C
ATOM 16 N7 A A 942 51.912 67.147 110.708 1.00 37.25 N
ATOM 17 C5 A A 942 50.760 66.867 111.431 1.00 36.97 C
ATOM 18 C6 A A 942 50.137 65.654 111.800 1.00 38.35 C
ATOM 19 N6 A A 942 50.614 64.441 111.495 1.00 37.27 N
ATOM 20 N1 A A 942 48.993 65.731 112.511 1.00 37.17 N
ATOM 21 C2 A A 942 48.523 66.938 112.837 1.00 36.81 C
ATOM 22 N3 A A 942 49.016 68.141 112.558 1.00 36.65 N
ATOM 23 C4 A A 942 50.148 68.035 111.841 1.00 36.46 C
ATOM 24 P G A 943 53.946 71.897 114.856 1.00 39.66 P
ATOM 25 OP1 G A 943 54.159 73.037 115.777 1.00 40.59 O
ATOM 26 OP2 G A 943 55.102 71.297 114.160 1.00 38.84 O
ATOM 27 O5' G A 943 53.182 70.730 115.629 1.00 40.90 O
TER
ATOM 1 O3' U B 78 43.608 69.309 124.318 1.00 48.31 O
ATOM 2 P A B 79 43.814 70.477 123.234 1.00 48.67 P
ATOM 3 OP1 A B 79 44.284 71.674 123.975 1.00 46.67 O
ATOM 4 OP2 A B 79 42.572 70.566 122.413 1.00 47.89 O
ATOM 5 O5' A B 79 45.005 69.932 122.321 1.00 46.85 O
ATOM 6 C5' A B 79 46.329 69.772 122.865 1.00 44.24 C
ATOM 7 C4' A B 79 47.309 69.341 121.793 1.00 44.19 C
ATOM 8 O4' A B 79 47.105 67.951 121.427 1.00 44.95 O
ATOM 9 C3' A B 79 47.258 70.073 120.466 1.00 44.36 C
ATOM 10 O3' A B 79 47.900 71.337 120.532 1.00 44.34 O
ATOM 11 C2' A B 79 47.995 69.104 119.549 1.00 44.63 C
ATOM 12 O2' A B 79 49.399 69.168 119.706 1.00 45.88 O
ATOM 13 C1' A B 79 47.495 67.756 120.075 1.00 44.11 C
ATOM 14 N9 A B 79 46.347 67.245 119.327 1.00 44.01 N
ATOM 15 C8 A B 79 45.026 67.211 119.716 1.00 45.63 C
ATOM 16 N7 A B 79 44.223 66.695 118.816 1.00 45.70 N
ATOM 17 C5 A B 79 45.069 66.364 117.764 1.00 45.08 C
ATOM 18 C6 A B 79 44.831 65.775 116.505 1.00 44.21 C
ATOM 19 N6 A B 79 43.624 65.392 116.082 1.00 42.41 N
ATOM 20 N1 A B 79 45.894 65.590 115.689 1.00 43.76 N
ATOM 21 C2 A B 79 47.107 65.968 116.119 1.00 43.03 C
ATOM 22 N3 A B 79 47.456 66.523 117.279 1.00 43.19 N
ATOM 23 C4 A B 79 46.380 66.698 118.065 1.00 43.82 C
ATOM 24 P C B 80 47.240 72.604 119.793 1.00 45.75 P
ATOM 25 OP1 C B 80 48.190 73.734 119.972 1.00 45.33 O
ATOM 26 OP2 C B 80 45.830 72.749 120.254 1.00 43.54 O
ATOM 27 O5' C B 80 47.217 72.184 118.253 1.00 44.17 O
TER
Atoms:
OP1: (56.671,71.853,110.662)
OP2: (56.273,69.343,110.273)
C3': (52.449,71.450,112.769)
C1': (50.683,70.491,111.545)
C5': (53.731,72.198,110.703)
O4': (51.518,71.212,110.646)
C8: (51.971,68.454,110.700)
O2': (50.129,72.045,113.280)
C6: (50.137,65.654,111.800)
C5: (50.760,66.867,111.431)
C4: (50.148,68.035,111.841)
P: (55.843,70.749,110.091)
C4': (52.400,72.092,111.398)
C2': (51.010,70.989,112.954)
C2: (48.523,66.938,112.837)
N1: (48.993,65.731,112.511)
N3: (49.016,68.141,112.558)
N6: (50.614,64.441,111.495)
N7: (51.912,67.147,110.708)
N9: (50.932,69.058,111.365)
O5': (54.375,70.915,110.678)
O3': (52.884,72.368,113.754)
OP2: (56.273,69.343,110.273)
C3': (52.449,71.450,112.769)
C1': (50.683,70.491,111.545)
C5': (53.731,72.198,110.703)
O4': (51.518,71.212,110.646)
C8: (51.971,68.454,110.700)
O2': (50.129,72.045,113.280)
C6: (50.137,65.654,111.800)
C5: (50.760,66.867,111.431)
C4: (50.148,68.035,111.841)
P: (55.843,70.749,110.091)
C4': (52.400,72.092,111.398)
C2': (51.010,70.989,112.954)
C2: (48.523,66.938,112.837)
N1: (48.993,65.731,112.511)
N3: (49.016,68.141,112.558)
N6: (50.614,64.441,111.495)
N7: (51.912,67.147,110.708)
N9: (50.932,69.058,111.365)
O5': (54.375,70.915,110.678)
O3': (52.884,72.368,113.754)
OP1: (44.284,71.674,123.975)
OP2: (42.572,70.566,122.413)
C3': (47.258,70.073,120.466)
C1': (47.495,67.756,120.075)
C5': (46.329,69.772,122.865)
O4': (47.105,67.951,121.427)
C8: (45.026,67.211,119.716)
O2': (49.399,69.168,119.706)
C6: (44.831,65.775,116.505)
C5: (45.069,66.364,117.764)
C4: (46.380,66.698,118.065)
P: (43.814,70.477,123.234)
C4': (47.309,69.341,121.793)
C2': (47.995,69.104,119.549)
C2: (47.107,65.968,116.119)
N1: (45.894,65.590,115.689)
N3: (47.456,66.523,117.279)
N6: (43.624,65.392,116.082)
N7: (44.223,66.695,118.816)
N9: (46.347,67.245,119.327)
O5': (45.005,69.932,122.321)
O3': (47.900,71.337,120.532)
OP2: (42.572,70.566,122.413)
C3': (47.258,70.073,120.466)
C1': (47.495,67.756,120.075)
C5': (46.329,69.772,122.865)
O4': (47.105,67.951,121.427)
C8: (45.026,67.211,119.716)
O2': (49.399,69.168,119.706)
C6: (44.831,65.775,116.505)
C5: (45.069,66.364,117.764)
C4: (46.380,66.698,118.065)
P: (43.814,70.477,123.234)
C4': (47.309,69.341,121.793)
C2': (47.995,69.104,119.549)
C2: (47.107,65.968,116.119)
N1: (45.894,65.590,115.689)
N3: (47.456,66.523,117.279)
N6: (43.624,65.392,116.082)
N7: (44.223,66.695,118.816)
N9: (46.347,67.245,119.327)
O5': (45.005,69.932,122.321)
O3': (47.900,71.337,120.532)
Image (generated by PyMOL):