ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:0999:01253

Extra

PDB:
ATOM 1 O3' G A 998 43.422 94.790 67.252 1.00 30.30 O
ATOM 2 P A A 999 44.967 94.581 67.621 1.00 30.94 P
ATOM 3 OP1 A A 999 45.517 95.917 67.920 1.00 31.15 O
ATOM 4 OP2 A A 999 45.614 93.738 66.596 1.00 32.57 O
ATOM 5 O5' A A 999 44.919 93.724 68.954 1.00 29.39 O
ATOM 6 C5' A A 999 45.293 94.301 70.204 1.00 26.76 C
ATOM 7 C4' A A 999 44.070 94.799 70.921 1.00 25.98 C
ATOM 8 O4' A A 999 43.153 93.707 71.181 1.00 24.15 O
ATOM 9 C3' A A 999 44.361 95.371 72.286 1.00 26.36 C
ATOM 10 O3' A A 999 44.806 96.707 72.145 1.00 28.12 O
ATOM 11 C2' A A 999 43.011 95.247 72.974 1.00 25.05 C
ATOM 12 O2' A A 999 42.108 96.249 72.566 1.00 25.40 O
ATOM 13 C1' A A 999 42.534 93.894 72.440 1.00 22.66 C
ATOM 14 N9 A A 999 42.911 92.772 73.301 1.00 21.09 N
ATOM 15 C8 A A 999 43.731 91.719 72.999 1.00 19.58 C
ATOM 16 N7 A A 999 43.885 90.869 73.983 1.00 19.29 N
ATOM 17 C5 A A 999 43.113 91.398 75.004 1.00 19.90 C
ATOM 18 C6 A A 999 42.864 90.972 76.319 1.00 20.97 C
ATOM 19 N6 A A 999 43.373 89.860 76.850 1.00 19.65 N
ATOM 20 N1 A A 999 42.063 91.738 77.081 1.00 22.02 N
ATOM 21 C2 A A 999 41.544 92.847 76.552 1.00 23.07 C
ATOM 22 N3 A A 999 41.695 93.347 75.334 1.00 22.68 N
ATOM 23 C4 A A 999 42.505 92.567 74.599 1.00 21.22 C
ATOM 24 P U A1000 46.243 97.131 72.716 1.00 29.00 P
ATOM 25 OP1 U A1000 46.517 98.448 72.096 1.00 31.01 O
ATOM 26 OP2 U A1000 47.211 96.011 72.532 1.00 23.47 O
ATOM 27 O5' U A1000 45.988 97.366 74.271 1.00 25.96 O
TER

ATOM 1 O3' U B1252 37.863 103.463 82.257 1.00 29.37 O
ATOM 2 P A B1253 37.780 103.283 80.674 1.00 31.11 P
ATOM 3 OP1 A B1253 38.097 104.624 80.130 1.00 33.06 O
ATOM 4 OP2 A B1253 36.482 102.629 80.337 1.00 29.98 O
ATOM 5 O5' A B1253 38.977 102.293 80.328 1.00 27.28 O
ATOM 6 C5' A B1253 40.330 102.705 80.523 1.00 27.71 C
ATOM 7 C4' A B1253 41.279 101.597 80.154 1.00 27.41 C
ATOM 8 O4' A B1253 41.160 100.503 81.092 1.00 29.70 O
ATOM 9 C3' A B1253 41.050 100.959 78.804 1.00 27.50 C
ATOM 10 O3' A B1253 41.635 101.758 77.784 1.00 30.34 O
ATOM 11 C2' A B1253 41.751 99.617 78.970 1.00 28.70 C
ATOM 12 O2' A B1253 43.153 99.694 78.848 1.00 27.92 O
ATOM 13 C1' A B1253 41.417 99.277 80.424 1.00 29.32 C
ATOM 14 N9 A B1253 40.238 98.419 80.550 1.00 30.35 N
ATOM 15 C8 A B1253 38.971 98.774 80.950 1.00 30.02 C
ATOM 16 N7 A B1253 38.115 97.786 80.921 1.00 31.17 N
ATOM 17 C5 A B1253 38.867 96.702 80.482 1.00 29.99 C
ATOM 18 C6 A B1253 38.537 95.354 80.231 1.00 28.76 C
ATOM 19 N6 A B1253 37.309 94.846 80.383 1.00 25.67 N
ATOM 20 N1 A B1253 39.525 94.536 79.806 1.00 28.68 N
ATOM 21 C2 A B1253 40.748 95.043 79.641 1.00 28.46 C
ATOM 22 N3 A B1253 41.179 96.286 79.839 1.00 29.99 N
ATOM 23 C4 A B1253 40.178 97.076 80.262 1.00 28.69 C
ATOM 24 P G B1254 40.832 102.040 76.421 1.00 29.87 P
ATOM 25 OP1 G B1254 41.821 102.637 75.495 1.00 30.12 O
ATOM 26 OP2 G B1254 39.576 102.770 76.721 1.00 28.40 O
ATOM 27 O5' G B1254 40.472 100.589 75.888 1.00 27.62 O
TER

Atoms:
OP1: (45.517,95.917,67.920)
OP2: (45.614,93.738,66.596)
C3': (44.361,95.371,72.286)
C1': (42.534,93.894,72.440)
C5': (45.293,94.301,70.204)
O4': (43.153,93.707,71.181)
C8: (43.731,91.719,72.999)
O2': (42.108,96.249,72.566)
C6: (42.864,90.972,76.319)
C5: (43.113,91.398,75.004)
C4: (42.505,92.567,74.599)
P: (44.967,94.581,67.621)
C4': (44.070,94.799,70.921)
C2': (43.011,95.247,72.974)
C2: (41.544,92.847,76.552)
N1: (42.063,91.738,77.081)
N3: (41.695,93.347,75.334)
N6: (43.373,89.860,76.850)
N7: (43.885,90.869,73.983)
N9: (42.911,92.772,73.301)
O5': (44.919,93.724,68.954)
O3': (44.806,96.707,72.145)
OP1: (38.097,104.624,80.130)
OP2: (36.482,102.629,80.337)
C3': (41.050,100.959,78.804)
C1': (41.417,99.277,80.424)
C5': (40.330,102.705,80.523)
O4': (41.160,100.503,81.092)
C8: (38.971,98.774,80.950)
O2': (43.153,99.694,78.848)
C6: (38.537,95.354,80.231)
C5: (38.867,96.702,80.482)
C4: (40.178,97.076,80.262)
P: (37.780,103.283,80.674)
C4': (41.279,101.597,80.154)
C2': (41.751,99.617,78.970)
C2: (40.748,95.043,79.641)
N1: (39.525,94.536,79.806)
N3: (41.179,96.286,79.839)
N6: (37.309,94.846,80.383)
N7: (38.115,97.786,80.921)
N9: (40.238,98.419,80.550)
O5': (38.977,102.293,80.328)
O3': (41.635,101.758,77.784)
Image (generated by PyMOL):
PyMOL image
show in jmol