Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0999:01253
Extra
PDB:
ATOM 1 O3' G A 998 43.650 95.137 67.592 1.00 41.27 O
ATOM 2 P A A 999 45.206 94.965 67.937 1.00 42.83 P
ATOM 3 OP1 A A 999 45.747 96.325 68.204 1.00 43.03 O
ATOM 4 OP2 A A 999 45.848 94.107 66.910 1.00 42.62 O
ATOM 5 O5' A A 999 45.179 94.123 69.284 1.00 40.29 O
ATOM 6 C5' A A 999 45.523 94.716 70.535 1.00 36.73 C
ATOM 7 C4' A A 999 44.276 95.146 71.260 1.00 35.44 C
ATOM 8 O4' A A 999 43.398 94.020 71.499 1.00 32.17 O
ATOM 9 C3' A A 999 44.540 95.699 72.638 1.00 35.35 C
ATOM 10 O3' A A 999 44.966 97.047 72.530 1.00 37.55 O
ATOM 11 C2' A A 999 43.188 95.532 73.315 1.00 33.29 C
ATOM 12 O2' A A 999 42.257 96.519 72.948 1.00 32.92 O
ATOM 13 C1' A A 999 42.742 94.188 72.744 1.00 31.30 C
ATOM 14 N9 A A 999 43.113 93.076 73.614 1.00 30.85 N
ATOM 15 C8 A A 999 43.961 92.033 73.343 1.00 30.73 C
ATOM 16 N7 A A 999 44.098 91.194 74.340 1.00 30.39 N
ATOM 17 C5 A A 999 43.289 91.721 75.334 1.00 29.40 C
ATOM 18 C6 A A 999 43.019 91.310 76.647 1.00 29.41 C
ATOM 19 N6 A A 999 43.534 90.214 77.201 1.00 29.40 N
ATOM 20 N1 A A 999 42.190 92.072 77.384 1.00 29.09 N
ATOM 21 C2 A A 999 41.661 93.163 76.826 1.00 30.80 C
ATOM 22 N3 A A 999 41.829 93.648 75.600 1.00 31.35 N
ATOM 23 C4 A A 999 42.671 92.875 74.899 1.00 30.37 C
ATOM 24 P U A1000 46.409 97.463 73.080 1.00 37.03 P
ATOM 25 OP1 U A1000 46.710 98.758 72.450 1.00 38.60 O
ATOM 26 OP2 U A1000 47.341 96.329 72.901 1.00 35.29 O
ATOM 27 O5' U A1000 46.161 97.683 74.637 1.00 36.55 O
TER
ATOM 1 O3' U B1252 38.027 103.767 82.561 1.00 37.96 O
ATOM 2 P A B1253 37.933 103.600 80.979 1.00 39.19 P
ATOM 3 OP1 A B1253 38.236 104.925 80.392 1.00 40.12 O
ATOM 4 OP2 A B1253 36.624 102.942 80.697 1.00 39.94 O
ATOM 5 O5' A B1253 39.123 102.602 80.623 1.00 36.22 O
ATOM 6 C5' A B1253 40.479 102.986 80.848 1.00 34.97 C
ATOM 7 C4' A B1253 41.416 101.869 80.475 1.00 34.88 C
ATOM 8 O4' A B1253 41.309 100.783 81.422 1.00 36.23 O
ATOM 9 C3' A B1253 41.174 101.221 79.131 1.00 34.54 C
ATOM 10 O3' A B1253 41.770 101.995 78.108 1.00 36.37 O
ATOM 11 C2' A B1253 41.865 99.875 79.294 1.00 35.78 C
ATOM 12 O2' A B1253 43.258 99.950 79.127 1.00 39.23 O
ATOM 13 C1' A B1253 41.570 99.556 80.761 1.00 35.93 C
ATOM 14 N9 A B1253 40.412 98.678 80.927 1.00 37.00 N
ATOM 15 C8 A B1253 39.153 98.994 81.380 1.00 36.30 C
ATOM 16 N7 A B1253 38.324 97.982 81.371 1.00 37.23 N
ATOM 17 C5 A B1253 39.087 96.928 80.887 1.00 35.53 C
ATOM 18 C6 A B1253 38.787 95.582 80.632 1.00 34.19 C
ATOM 19 N6 A B1253 37.586 95.034 80.828 1.00 32.48 N
ATOM 20 N1 A B1253 39.775 94.801 80.158 1.00 34.88 N
ATOM 21 C2 A B1253 40.976 95.339 79.960 1.00 36.47 C
ATOM 22 N3 A B1253 41.383 96.587 80.162 1.00 37.25 N
ATOM 23 C4 A B1253 40.376 97.340 80.626 1.00 35.78 C
ATOM 24 P G B1254 40.951 102.309 76.766 1.00 37.88 P
ATOM 25 OP1 G B1254 41.912 102.945 75.831 1.00 37.11 O
ATOM 26 OP2 G B1254 39.686 103.017 77.125 1.00 36.06 O
ATOM 27 O5' G B1254 40.612 100.866 76.194 1.00 35.95 O
TER
ATOM 2 P A A 999 45.206 94.965 67.937 1.00 42.83 P
ATOM 3 OP1 A A 999 45.747 96.325 68.204 1.00 43.03 O
ATOM 4 OP2 A A 999 45.848 94.107 66.910 1.00 42.62 O
ATOM 5 O5' A A 999 45.179 94.123 69.284 1.00 40.29 O
ATOM 6 C5' A A 999 45.523 94.716 70.535 1.00 36.73 C
ATOM 7 C4' A A 999 44.276 95.146 71.260 1.00 35.44 C
ATOM 8 O4' A A 999 43.398 94.020 71.499 1.00 32.17 O
ATOM 9 C3' A A 999 44.540 95.699 72.638 1.00 35.35 C
ATOM 10 O3' A A 999 44.966 97.047 72.530 1.00 37.55 O
ATOM 11 C2' A A 999 43.188 95.532 73.315 1.00 33.29 C
ATOM 12 O2' A A 999 42.257 96.519 72.948 1.00 32.92 O
ATOM 13 C1' A A 999 42.742 94.188 72.744 1.00 31.30 C
ATOM 14 N9 A A 999 43.113 93.076 73.614 1.00 30.85 N
ATOM 15 C8 A A 999 43.961 92.033 73.343 1.00 30.73 C
ATOM 16 N7 A A 999 44.098 91.194 74.340 1.00 30.39 N
ATOM 17 C5 A A 999 43.289 91.721 75.334 1.00 29.40 C
ATOM 18 C6 A A 999 43.019 91.310 76.647 1.00 29.41 C
ATOM 19 N6 A A 999 43.534 90.214 77.201 1.00 29.40 N
ATOM 20 N1 A A 999 42.190 92.072 77.384 1.00 29.09 N
ATOM 21 C2 A A 999 41.661 93.163 76.826 1.00 30.80 C
ATOM 22 N3 A A 999 41.829 93.648 75.600 1.00 31.35 N
ATOM 23 C4 A A 999 42.671 92.875 74.899 1.00 30.37 C
ATOM 24 P U A1000 46.409 97.463 73.080 1.00 37.03 P
ATOM 25 OP1 U A1000 46.710 98.758 72.450 1.00 38.60 O
ATOM 26 OP2 U A1000 47.341 96.329 72.901 1.00 35.29 O
ATOM 27 O5' U A1000 46.161 97.683 74.637 1.00 36.55 O
TER
ATOM 1 O3' U B1252 38.027 103.767 82.561 1.00 37.96 O
ATOM 2 P A B1253 37.933 103.600 80.979 1.00 39.19 P
ATOM 3 OP1 A B1253 38.236 104.925 80.392 1.00 40.12 O
ATOM 4 OP2 A B1253 36.624 102.942 80.697 1.00 39.94 O
ATOM 5 O5' A B1253 39.123 102.602 80.623 1.00 36.22 O
ATOM 6 C5' A B1253 40.479 102.986 80.848 1.00 34.97 C
ATOM 7 C4' A B1253 41.416 101.869 80.475 1.00 34.88 C
ATOM 8 O4' A B1253 41.309 100.783 81.422 1.00 36.23 O
ATOM 9 C3' A B1253 41.174 101.221 79.131 1.00 34.54 C
ATOM 10 O3' A B1253 41.770 101.995 78.108 1.00 36.37 O
ATOM 11 C2' A B1253 41.865 99.875 79.294 1.00 35.78 C
ATOM 12 O2' A B1253 43.258 99.950 79.127 1.00 39.23 O
ATOM 13 C1' A B1253 41.570 99.556 80.761 1.00 35.93 C
ATOM 14 N9 A B1253 40.412 98.678 80.927 1.00 37.00 N
ATOM 15 C8 A B1253 39.153 98.994 81.380 1.00 36.30 C
ATOM 16 N7 A B1253 38.324 97.982 81.371 1.00 37.23 N
ATOM 17 C5 A B1253 39.087 96.928 80.887 1.00 35.53 C
ATOM 18 C6 A B1253 38.787 95.582 80.632 1.00 34.19 C
ATOM 19 N6 A B1253 37.586 95.034 80.828 1.00 32.48 N
ATOM 20 N1 A B1253 39.775 94.801 80.158 1.00 34.88 N
ATOM 21 C2 A B1253 40.976 95.339 79.960 1.00 36.47 C
ATOM 22 N3 A B1253 41.383 96.587 80.162 1.00 37.25 N
ATOM 23 C4 A B1253 40.376 97.340 80.626 1.00 35.78 C
ATOM 24 P G B1254 40.951 102.309 76.766 1.00 37.88 P
ATOM 25 OP1 G B1254 41.912 102.945 75.831 1.00 37.11 O
ATOM 26 OP2 G B1254 39.686 103.017 77.125 1.00 36.06 O
ATOM 27 O5' G B1254 40.612 100.866 76.194 1.00 35.95 O
TER
Atoms:
OP1: (45.747,96.325,68.204)
OP2: (45.848,94.107,66.910)
C3': (44.540,95.699,72.638)
C1': (42.742,94.188,72.744)
C5': (45.523,94.716,70.535)
O4': (43.398,94.020,71.499)
C8: (43.961,92.033,73.343)
O2': (42.257,96.519,72.948)
C6: (43.019,91.310,76.647)
C5: (43.289,91.721,75.334)
C4: (42.671,92.875,74.899)
P: (45.206,94.965,67.937)
C4': (44.276,95.146,71.260)
C2': (43.188,95.532,73.315)
C2: (41.661,93.163,76.826)
N1: (42.190,92.072,77.384)
N3: (41.829,93.648,75.600)
N6: (43.534,90.214,77.201)
N7: (44.098,91.194,74.340)
N9: (43.113,93.076,73.614)
O5': (45.179,94.123,69.284)
O3': (44.966,97.047,72.530)
OP2: (45.848,94.107,66.910)
C3': (44.540,95.699,72.638)
C1': (42.742,94.188,72.744)
C5': (45.523,94.716,70.535)
O4': (43.398,94.020,71.499)
C8: (43.961,92.033,73.343)
O2': (42.257,96.519,72.948)
C6: (43.019,91.310,76.647)
C5: (43.289,91.721,75.334)
C4: (42.671,92.875,74.899)
P: (45.206,94.965,67.937)
C4': (44.276,95.146,71.260)
C2': (43.188,95.532,73.315)
C2: (41.661,93.163,76.826)
N1: (42.190,92.072,77.384)
N3: (41.829,93.648,75.600)
N6: (43.534,90.214,77.201)
N7: (44.098,91.194,74.340)
N9: (43.113,93.076,73.614)
O5': (45.179,94.123,69.284)
O3': (44.966,97.047,72.530)
OP1: (38.236,104.925,80.392)
OP2: (36.624,102.942,80.697)
C3': (41.174,101.221,79.131)
C1': (41.570,99.556,80.761)
C5': (40.479,102.986,80.848)
O4': (41.309,100.783,81.422)
C8: (39.153,98.994,81.380)
O2': (43.258,99.950,79.127)
C6: (38.787,95.582,80.632)
C5: (39.087,96.928,80.887)
C4: (40.376,97.340,80.626)
P: (37.933,103.600,80.979)
C4': (41.416,101.869,80.475)
C2': (41.865,99.875,79.294)
C2: (40.976,95.339,79.960)
N1: (39.775,94.801,80.158)
N3: (41.383,96.587,80.162)
N6: (37.586,95.034,80.828)
N7: (38.324,97.982,81.371)
N9: (40.412,98.678,80.927)
O5': (39.123,102.602,80.623)
O3': (41.770,101.995,78.108)
OP2: (36.624,102.942,80.697)
C3': (41.174,101.221,79.131)
C1': (41.570,99.556,80.761)
C5': (40.479,102.986,80.848)
O4': (41.309,100.783,81.422)
C8: (39.153,98.994,81.380)
O2': (43.258,99.950,79.127)
C6: (38.787,95.582,80.632)
C5: (39.087,96.928,80.887)
C4: (40.376,97.340,80.626)
P: (37.933,103.600,80.979)
C4': (41.416,101.869,80.475)
C2': (41.865,99.875,79.294)
C2: (40.976,95.339,79.960)
N1: (39.775,94.801,80.158)
N3: (41.383,96.587,80.162)
N6: (37.586,95.034,80.828)
N7: (38.324,97.982,81.371)
N9: (40.412,98.678,80.927)
O5': (39.123,102.602,80.623)
O3': (41.770,101.995,78.108)
Image (generated by PyMOL):