Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2432:A2580
Extra
PDB:
ATOM 1 O3' U A2431 -75.333 -42.522 14.397 1.00 0.01 O
ATOM 2 P A A2432 -75.312 -44.049 13.873 1.00 1.00 P
ATOM 3 OP1 A A2432 -76.423 -44.206 12.924 1.00 1.00 O
ATOM 4 OP2 A A2432 -75.257 -44.938 15.055 1.00 1.00 O
ATOM 5 O5' A A2432 -73.936 -44.110 13.089 1.00 1.00 O
ATOM 6 C5' A A2432 -72.726 -43.771 13.748 1.00 1.00 C
ATOM 7 C4' A A2432 -72.026 -42.632 13.073 1.00 1.00 C
ATOM 8 O4' A A2432 -71.783 -43.011 11.718 1.00 1.00 O
ATOM 9 C3' A A2432 -72.793 -41.325 13.030 1.00 1.00 C
ATOM 10 O3' A A2432 -71.903 -40.243 13.155 1.00 1.00 O
ATOM 11 C2' A A2432 -73.399 -41.300 11.646 1.00 1.00 C
ATOM 12 O2' A A2432 -73.569 -39.993 11.116 1.00 1.00 O
ATOM 13 C1' A A2432 -72.394 -42.119 10.832 1.00 1.00 C
ATOM 14 N9 A A2432 -73.024 -42.934 9.819 1.00 1.03 N
ATOM 15 C8 A A2432 -73.023 -44.303 9.783 1.00 1.03 C
ATOM 16 N7 A A2432 -73.738 -44.758 8.785 1.00 1.03 N
ATOM 17 C5 A A2432 -74.225 -43.610 8.163 1.00 1.03 C
ATOM 18 C6 A A2432 -75.032 -43.406 7.044 1.00 1.03 C
ATOM 19 N6 A A2432 -75.504 -44.423 6.332 1.00 1.03 N
ATOM 20 N1 A A2432 -75.336 -42.139 6.668 1.00 1.03 N
ATOM 21 C2 A A2432 -74.848 -41.124 7.399 1.00 1.03 C
ATOM 22 N3 A A2432 -74.072 -41.179 8.471 1.00 1.03 N
ATOM 23 C4 A A2432 -73.801 -42.469 8.793 1.00 1.03 C
ATOM 24 P C A2433 -71.636 -39.592 14.573 1.00 0.01 P
ATOM 25 OP1 C A2433 -72.780 -39.892 15.426 1.00 0.01 O
ATOM 26 OP2 C A2433 -71.285 -38.192 14.341 1.00 0.01 O
ATOM 27 O5' C A2433 -70.368 -40.397 15.057 1.00 0.01 O
TER
ATOM 1 O3' U B2579 -70.405 -42.619 8.066 1.00 6.67 O
ATOM 2 P A B2580 -69.863 -41.158 7.768 1.00 0.01 P
ATOM 3 OP1 A B2580 -70.880 -40.220 8.277 1.00 0.01 O
ATOM 4 OP2 A B2580 -69.480 -41.117 6.339 1.00 0.01 O
ATOM 5 O5' A B2580 -68.588 -41.091 8.685 1.00 0.01 O
ATOM 6 C5' A B2580 -68.690 -41.312 10.079 1.00 0.01 C
ATOM 7 C4' A B2580 -67.328 -41.401 10.702 1.00 0.01 C
ATOM 8 O4' A B2580 -66.580 -42.461 10.066 1.00 0.01 O
ATOM 9 C3' A B2580 -66.454 -40.180 10.524 1.00 0.01 C
ATOM 10 O3' A B2580 -66.728 -39.166 11.480 1.00 0.01 O
ATOM 11 C2' A B2580 -65.052 -40.756 10.608 1.00 0.01 C
ATOM 12 O2' A B2580 -64.681 -40.968 11.946 1.00 0.01 O
ATOM 13 C1' A B2580 -65.234 -42.109 9.952 1.00 0.01 C
ATOM 14 N9 A B2580 -64.884 -42.089 8.530 1.00 0.01 N
ATOM 15 C8 A B2580 -65.711 -41.886 7.467 1.00 0.01 C
ATOM 16 N7 A B2580 -65.086 -41.932 6.322 1.00 0.01 N
ATOM 17 C5 A B2580 -63.774 -42.202 6.666 1.00 0.01 C
ATOM 18 C6 A B2580 -62.617 -42.376 5.921 1.00 0.01 C
ATOM 19 N6 A B2580 -62.593 -42.305 4.596 1.00 0.01 N
ATOM 20 N1 A B2580 -61.473 -42.639 6.558 1.00 0.01 N
ATOM 21 C2 A B2580 -61.517 -42.720 7.860 1.00 0.01 C
ATOM 22 N3 A B2580 -62.529 -42.569 8.671 1.00 0.01 N
ATOM 23 C4 A B2580 -63.641 -42.310 8.010 1.00 0.01 C
ATOM 24 P G B2581 -66.953 -37.657 11.003 1.00 0.01 P
ATOM 25 OP1 G B2581 -66.989 -36.832 12.174 1.00 0.01 O
ATOM 26 OP2 G B2581 -68.098 -37.644 10.105 1.00 0.01 O
ATOM 27 O5' G B2581 -65.638 -37.367 10.189 1.00 0.01 O
TER
ATOM 2 P A A2432 -75.312 -44.049 13.873 1.00 1.00 P
ATOM 3 OP1 A A2432 -76.423 -44.206 12.924 1.00 1.00 O
ATOM 4 OP2 A A2432 -75.257 -44.938 15.055 1.00 1.00 O
ATOM 5 O5' A A2432 -73.936 -44.110 13.089 1.00 1.00 O
ATOM 6 C5' A A2432 -72.726 -43.771 13.748 1.00 1.00 C
ATOM 7 C4' A A2432 -72.026 -42.632 13.073 1.00 1.00 C
ATOM 8 O4' A A2432 -71.783 -43.011 11.718 1.00 1.00 O
ATOM 9 C3' A A2432 -72.793 -41.325 13.030 1.00 1.00 C
ATOM 10 O3' A A2432 -71.903 -40.243 13.155 1.00 1.00 O
ATOM 11 C2' A A2432 -73.399 -41.300 11.646 1.00 1.00 C
ATOM 12 O2' A A2432 -73.569 -39.993 11.116 1.00 1.00 O
ATOM 13 C1' A A2432 -72.394 -42.119 10.832 1.00 1.00 C
ATOM 14 N9 A A2432 -73.024 -42.934 9.819 1.00 1.03 N
ATOM 15 C8 A A2432 -73.023 -44.303 9.783 1.00 1.03 C
ATOM 16 N7 A A2432 -73.738 -44.758 8.785 1.00 1.03 N
ATOM 17 C5 A A2432 -74.225 -43.610 8.163 1.00 1.03 C
ATOM 18 C6 A A2432 -75.032 -43.406 7.044 1.00 1.03 C
ATOM 19 N6 A A2432 -75.504 -44.423 6.332 1.00 1.03 N
ATOM 20 N1 A A2432 -75.336 -42.139 6.668 1.00 1.03 N
ATOM 21 C2 A A2432 -74.848 -41.124 7.399 1.00 1.03 C
ATOM 22 N3 A A2432 -74.072 -41.179 8.471 1.00 1.03 N
ATOM 23 C4 A A2432 -73.801 -42.469 8.793 1.00 1.03 C
ATOM 24 P C A2433 -71.636 -39.592 14.573 1.00 0.01 P
ATOM 25 OP1 C A2433 -72.780 -39.892 15.426 1.00 0.01 O
ATOM 26 OP2 C A2433 -71.285 -38.192 14.341 1.00 0.01 O
ATOM 27 O5' C A2433 -70.368 -40.397 15.057 1.00 0.01 O
TER
ATOM 1 O3' U B2579 -70.405 -42.619 8.066 1.00 6.67 O
ATOM 2 P A B2580 -69.863 -41.158 7.768 1.00 0.01 P
ATOM 3 OP1 A B2580 -70.880 -40.220 8.277 1.00 0.01 O
ATOM 4 OP2 A B2580 -69.480 -41.117 6.339 1.00 0.01 O
ATOM 5 O5' A B2580 -68.588 -41.091 8.685 1.00 0.01 O
ATOM 6 C5' A B2580 -68.690 -41.312 10.079 1.00 0.01 C
ATOM 7 C4' A B2580 -67.328 -41.401 10.702 1.00 0.01 C
ATOM 8 O4' A B2580 -66.580 -42.461 10.066 1.00 0.01 O
ATOM 9 C3' A B2580 -66.454 -40.180 10.524 1.00 0.01 C
ATOM 10 O3' A B2580 -66.728 -39.166 11.480 1.00 0.01 O
ATOM 11 C2' A B2580 -65.052 -40.756 10.608 1.00 0.01 C
ATOM 12 O2' A B2580 -64.681 -40.968 11.946 1.00 0.01 O
ATOM 13 C1' A B2580 -65.234 -42.109 9.952 1.00 0.01 C
ATOM 14 N9 A B2580 -64.884 -42.089 8.530 1.00 0.01 N
ATOM 15 C8 A B2580 -65.711 -41.886 7.467 1.00 0.01 C
ATOM 16 N7 A B2580 -65.086 -41.932 6.322 1.00 0.01 N
ATOM 17 C5 A B2580 -63.774 -42.202 6.666 1.00 0.01 C
ATOM 18 C6 A B2580 -62.617 -42.376 5.921 1.00 0.01 C
ATOM 19 N6 A B2580 -62.593 -42.305 4.596 1.00 0.01 N
ATOM 20 N1 A B2580 -61.473 -42.639 6.558 1.00 0.01 N
ATOM 21 C2 A B2580 -61.517 -42.720 7.860 1.00 0.01 C
ATOM 22 N3 A B2580 -62.529 -42.569 8.671 1.00 0.01 N
ATOM 23 C4 A B2580 -63.641 -42.310 8.010 1.00 0.01 C
ATOM 24 P G B2581 -66.953 -37.657 11.003 1.00 0.01 P
ATOM 25 OP1 G B2581 -66.989 -36.832 12.174 1.00 0.01 O
ATOM 26 OP2 G B2581 -68.098 -37.644 10.105 1.00 0.01 O
ATOM 27 O5' G B2581 -65.638 -37.367 10.189 1.00 0.01 O
TER
Atoms:
OP1: (-76.423,-44.206,12.924)
OP2: (-75.257,-44.938,15.055)
C3': (-72.793,-41.325,13.030)
C1': (-72.394,-42.119,10.832)
C5': (-72.726,-43.771,13.748)
O4': (-71.783,-43.011,11.718)
C8: (-73.023,-44.303,9.783)
O2': (-73.569,-39.993,11.116)
C6: (-75.032,-43.406,7.044)
C5: (-74.225,-43.610,8.163)
C4: (-73.801,-42.469,8.793)
P: (-75.312,-44.049,13.873)
C4': (-72.026,-42.632,13.073)
C2': (-73.399,-41.300,11.646)
C2: (-74.848,-41.124,7.399)
N1: (-75.336,-42.139,6.668)
N3: (-74.072,-41.179,8.471)
N6: (-75.504,-44.423,6.332)
N7: (-73.738,-44.758,8.785)
N9: (-73.024,-42.934,9.819)
O5': (-73.936,-44.110,13.089)
O3': (-71.903,-40.243,13.155)
OP2: (-75.257,-44.938,15.055)
C3': (-72.793,-41.325,13.030)
C1': (-72.394,-42.119,10.832)
C5': (-72.726,-43.771,13.748)
O4': (-71.783,-43.011,11.718)
C8: (-73.023,-44.303,9.783)
O2': (-73.569,-39.993,11.116)
C6: (-75.032,-43.406,7.044)
C5: (-74.225,-43.610,8.163)
C4: (-73.801,-42.469,8.793)
P: (-75.312,-44.049,13.873)
C4': (-72.026,-42.632,13.073)
C2': (-73.399,-41.300,11.646)
C2: (-74.848,-41.124,7.399)
N1: (-75.336,-42.139,6.668)
N3: (-74.072,-41.179,8.471)
N6: (-75.504,-44.423,6.332)
N7: (-73.738,-44.758,8.785)
N9: (-73.024,-42.934,9.819)
O5': (-73.936,-44.110,13.089)
O3': (-71.903,-40.243,13.155)
OP1: (-70.880,-40.220,8.277)
OP2: (-69.480,-41.117,6.339)
C3': (-66.454,-40.180,10.524)
C1': (-65.234,-42.109,9.952)
C5': (-68.690,-41.312,10.079)
O4': (-66.580,-42.461,10.066)
C8: (-65.711,-41.886,7.467)
O2': (-64.681,-40.968,11.946)
C6: (-62.617,-42.376,5.921)
C5: (-63.774,-42.202,6.666)
C4: (-63.641,-42.310,8.010)
P: (-69.863,-41.158,7.768)
C4': (-67.328,-41.401,10.702)
C2': (-65.052,-40.756,10.608)
C2: (-61.517,-42.720,7.860)
N1: (-61.473,-42.639,6.558)
N3: (-62.529,-42.569,8.671)
N6: (-62.593,-42.305,4.596)
N7: (-65.086,-41.932,6.322)
N9: (-64.884,-42.089,8.530)
O5': (-68.588,-41.091,8.685)
O3': (-66.728,-39.166,11.480)
OP2: (-69.480,-41.117,6.339)
C3': (-66.454,-40.180,10.524)
C1': (-65.234,-42.109,9.952)
C5': (-68.690,-41.312,10.079)
O4': (-66.580,-42.461,10.066)
C8: (-65.711,-41.886,7.467)
O2': (-64.681,-40.968,11.946)
C6: (-62.617,-42.376,5.921)
C5: (-63.774,-42.202,6.666)
C4: (-63.641,-42.310,8.010)
P: (-69.863,-41.158,7.768)
C4': (-67.328,-41.401,10.702)
C2': (-65.052,-40.756,10.608)
C2: (-61.517,-42.720,7.860)
N1: (-61.473,-42.639,6.558)
N3: (-62.529,-42.569,8.671)
N6: (-62.593,-42.305,4.596)
N7: (-65.086,-41.932,6.322)
N9: (-64.884,-42.089,8.530)
O5': (-68.588,-41.091,8.685)
O3': (-66.728,-39.166,11.480)
Image (generated by PyMOL):