Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0942:979
Extra
PDB:
ATOM 1 O3' U A 941 55.800 71.122 108.836 1.00 37.86 O
ATOM 2 P A A 942 56.041 70.832 110.394 1.00 37.86 P
ATOM 3 OP1 A A 942 56.938 71.912 110.879 1.00 39.27 O
ATOM 4 OP2 A A 942 56.436 69.424 110.581 1.00 40.66 O
ATOM 5 O5' A A 942 54.605 71.028 111.046 1.00 39.60 O
ATOM 6 C5' A A 942 53.968 72.321 111.066 1.00 40.67 C
ATOM 7 C4' A A 942 52.648 72.235 111.787 1.00 42.10 C
ATOM 8 O4' A A 942 51.728 71.407 111.026 1.00 42.39 O
ATOM 9 C3' A A 942 52.696 71.568 113.150 1.00 43.07 C
ATOM 10 O3' A A 942 53.138 72.462 114.162 1.00 45.45 O
ATOM 11 C2' A A 942 51.252 71.122 113.335 1.00 42.96 C
ATOM 12 O2' A A 942 50.393 72.184 113.700 1.00 43.11 O
ATOM 13 C1' A A 942 50.901 70.670 111.915 1.00 42.58 C
ATOM 14 N9 A A 942 51.145 69.245 111.694 1.00 43.25 N
ATOM 15 C8 A A 942 52.169 68.664 110.987 1.00 43.67 C
ATOM 16 N7 A A 942 52.124 67.355 110.971 1.00 45.69 N
ATOM 17 C5 A A 942 50.992 67.050 111.718 1.00 45.02 C
ATOM 18 C6 A A 942 50.384 65.825 112.076 1.00 45.16 C
ATOM 19 N6 A A 942 50.851 64.622 111.731 1.00 44.99 N
ATOM 20 N1 A A 942 49.262 65.880 112.814 1.00 45.75 N
ATOM 21 C2 A A 942 48.792 67.076 113.174 1.00 45.68 C
ATOM 22 N3 A A 942 49.268 68.286 112.906 1.00 45.25 N
ATOM 23 C4 A A 942 50.380 68.204 112.166 1.00 43.84 C
ATOM 24 P G A 943 54.181 71.949 115.270 1.00 48.05 P
ATOM 25 OP1 G A 943 54.455 73.037 116.238 1.00 49.16 O
ATOM 26 OP2 G A 943 55.305 71.315 114.546 1.00 47.35 O
ATOM 27 O5' G A 943 53.400 70.795 116.033 1.00 47.78 O
TER
ATOM 1 O3' U B 78 43.849 69.384 124.628 1.00 56.19 O
ATOM 2 P A B 79 44.040 70.538 123.529 1.00 57.68 P
ATOM 3 OP1 A B 79 44.521 71.734 124.275 1.00 56.03 O
ATOM 4 OP2 A B 79 42.804 70.641 122.701 1.00 55.82 O
ATOM 5 O5' A B 79 45.231 69.983 122.625 1.00 55.63 O
ATOM 6 C5' A B 79 46.556 69.842 123.169 1.00 52.24 C
ATOM 7 C4' A B 79 47.529 69.382 122.106 1.00 52.14 C
ATOM 8 O4' A B 79 47.298 67.993 121.754 1.00 52.51 O
ATOM 9 C3' A B 79 47.480 70.104 120.775 1.00 51.58 C
ATOM 10 O3' A B 79 48.139 71.355 120.849 1.00 49.89 O
ATOM 11 C2' A B 79 48.188 69.112 119.860 1.00 52.70 C
ATOM 12 O2' A B 79 49.591 69.126 120.013 1.00 54.63 O
ATOM 13 C1' A B 79 47.660 67.782 120.399 1.00 52.20 C
ATOM 14 N9 A B 79 46.479 67.323 119.675 1.00 53.52 N
ATOM 15 C8 A B 79 45.160 67.409 120.056 1.00 54.55 C
ATOM 16 N7 A B 79 44.325 66.910 119.180 1.00 55.62 N
ATOM 17 C5 A B 79 45.147 66.464 118.153 1.00 55.85 C
ATOM 18 C6 A B 79 44.872 65.838 116.922 1.00 56.05 C
ATOM 19 N6 A B 79 43.640 65.528 116.502 1.00 56.58 N
ATOM 20 N1 A B 79 45.921 65.537 116.125 1.00 55.64 N
ATOM 21 C2 A B 79 47.152 65.845 116.544 1.00 54.87 C
ATOM 22 N3 A B 79 47.536 66.426 117.677 1.00 54.57 N
ATOM 23 C4 A B 79 46.474 66.713 118.445 1.00 54.52 C
ATOM 24 P C B 80 47.456 72.653 120.199 1.00 50.27 P
ATOM 25 OP1 C B 80 48.393 73.787 120.428 1.00 51.44 O
ATOM 26 OP2 C B 80 46.050 72.755 120.689 1.00 50.47 O
ATOM 27 O5' C B 80 47.442 72.327 118.639 1.00 47.53 O
TER
ATOM 2 P A A 942 56.041 70.832 110.394 1.00 37.86 P
ATOM 3 OP1 A A 942 56.938 71.912 110.879 1.00 39.27 O
ATOM 4 OP2 A A 942 56.436 69.424 110.581 1.00 40.66 O
ATOM 5 O5' A A 942 54.605 71.028 111.046 1.00 39.60 O
ATOM 6 C5' A A 942 53.968 72.321 111.066 1.00 40.67 C
ATOM 7 C4' A A 942 52.648 72.235 111.787 1.00 42.10 C
ATOM 8 O4' A A 942 51.728 71.407 111.026 1.00 42.39 O
ATOM 9 C3' A A 942 52.696 71.568 113.150 1.00 43.07 C
ATOM 10 O3' A A 942 53.138 72.462 114.162 1.00 45.45 O
ATOM 11 C2' A A 942 51.252 71.122 113.335 1.00 42.96 C
ATOM 12 O2' A A 942 50.393 72.184 113.700 1.00 43.11 O
ATOM 13 C1' A A 942 50.901 70.670 111.915 1.00 42.58 C
ATOM 14 N9 A A 942 51.145 69.245 111.694 1.00 43.25 N
ATOM 15 C8 A A 942 52.169 68.664 110.987 1.00 43.67 C
ATOM 16 N7 A A 942 52.124 67.355 110.971 1.00 45.69 N
ATOM 17 C5 A A 942 50.992 67.050 111.718 1.00 45.02 C
ATOM 18 C6 A A 942 50.384 65.825 112.076 1.00 45.16 C
ATOM 19 N6 A A 942 50.851 64.622 111.731 1.00 44.99 N
ATOM 20 N1 A A 942 49.262 65.880 112.814 1.00 45.75 N
ATOM 21 C2 A A 942 48.792 67.076 113.174 1.00 45.68 C
ATOM 22 N3 A A 942 49.268 68.286 112.906 1.00 45.25 N
ATOM 23 C4 A A 942 50.380 68.204 112.166 1.00 43.84 C
ATOM 24 P G A 943 54.181 71.949 115.270 1.00 48.05 P
ATOM 25 OP1 G A 943 54.455 73.037 116.238 1.00 49.16 O
ATOM 26 OP2 G A 943 55.305 71.315 114.546 1.00 47.35 O
ATOM 27 O5' G A 943 53.400 70.795 116.033 1.00 47.78 O
TER
ATOM 1 O3' U B 78 43.849 69.384 124.628 1.00 56.19 O
ATOM 2 P A B 79 44.040 70.538 123.529 1.00 57.68 P
ATOM 3 OP1 A B 79 44.521 71.734 124.275 1.00 56.03 O
ATOM 4 OP2 A B 79 42.804 70.641 122.701 1.00 55.82 O
ATOM 5 O5' A B 79 45.231 69.983 122.625 1.00 55.63 O
ATOM 6 C5' A B 79 46.556 69.842 123.169 1.00 52.24 C
ATOM 7 C4' A B 79 47.529 69.382 122.106 1.00 52.14 C
ATOM 8 O4' A B 79 47.298 67.993 121.754 1.00 52.51 O
ATOM 9 C3' A B 79 47.480 70.104 120.775 1.00 51.58 C
ATOM 10 O3' A B 79 48.139 71.355 120.849 1.00 49.89 O
ATOM 11 C2' A B 79 48.188 69.112 119.860 1.00 52.70 C
ATOM 12 O2' A B 79 49.591 69.126 120.013 1.00 54.63 O
ATOM 13 C1' A B 79 47.660 67.782 120.399 1.00 52.20 C
ATOM 14 N9 A B 79 46.479 67.323 119.675 1.00 53.52 N
ATOM 15 C8 A B 79 45.160 67.409 120.056 1.00 54.55 C
ATOM 16 N7 A B 79 44.325 66.910 119.180 1.00 55.62 N
ATOM 17 C5 A B 79 45.147 66.464 118.153 1.00 55.85 C
ATOM 18 C6 A B 79 44.872 65.838 116.922 1.00 56.05 C
ATOM 19 N6 A B 79 43.640 65.528 116.502 1.00 56.58 N
ATOM 20 N1 A B 79 45.921 65.537 116.125 1.00 55.64 N
ATOM 21 C2 A B 79 47.152 65.845 116.544 1.00 54.87 C
ATOM 22 N3 A B 79 47.536 66.426 117.677 1.00 54.57 N
ATOM 23 C4 A B 79 46.474 66.713 118.445 1.00 54.52 C
ATOM 24 P C B 80 47.456 72.653 120.199 1.00 50.27 P
ATOM 25 OP1 C B 80 48.393 73.787 120.428 1.00 51.44 O
ATOM 26 OP2 C B 80 46.050 72.755 120.689 1.00 50.47 O
ATOM 27 O5' C B 80 47.442 72.327 118.639 1.00 47.53 O
TER
Atoms:
OP1: (56.938,71.912,110.879)
OP2: (56.436,69.424,110.581)
C3': (52.696,71.568,113.150)
C1': (50.901,70.670,111.915)
C5': (53.968,72.321,111.066)
O4': (51.728,71.407,111.026)
C8: (52.169,68.664,110.987)
O2': (50.393,72.184,113.700)
C6: (50.384,65.825,112.076)
C5: (50.992,67.050,111.718)
C4: (50.380,68.204,112.166)
P: (56.041,70.832,110.394)
C4': (52.648,72.235,111.787)
C2': (51.252,71.122,113.335)
C2: (48.792,67.076,113.174)
N1: (49.262,65.880,112.814)
N3: (49.268,68.286,112.906)
N6: (50.851,64.622,111.731)
N7: (52.124,67.355,110.971)
N9: (51.145,69.245,111.694)
O5': (54.605,71.028,111.046)
O3': (53.138,72.462,114.162)
OP2: (56.436,69.424,110.581)
C3': (52.696,71.568,113.150)
C1': (50.901,70.670,111.915)
C5': (53.968,72.321,111.066)
O4': (51.728,71.407,111.026)
C8: (52.169,68.664,110.987)
O2': (50.393,72.184,113.700)
C6: (50.384,65.825,112.076)
C5: (50.992,67.050,111.718)
C4: (50.380,68.204,112.166)
P: (56.041,70.832,110.394)
C4': (52.648,72.235,111.787)
C2': (51.252,71.122,113.335)
C2: (48.792,67.076,113.174)
N1: (49.262,65.880,112.814)
N3: (49.268,68.286,112.906)
N6: (50.851,64.622,111.731)
N7: (52.124,67.355,110.971)
N9: (51.145,69.245,111.694)
O5': (54.605,71.028,111.046)
O3': (53.138,72.462,114.162)
OP1: (44.521,71.734,124.275)
OP2: (42.804,70.641,122.701)
C3': (47.480,70.104,120.775)
C1': (47.660,67.782,120.399)
C5': (46.556,69.842,123.169)
O4': (47.298,67.993,121.754)
C8: (45.160,67.409,120.056)
O2': (49.591,69.126,120.013)
C6: (44.872,65.838,116.922)
C5: (45.147,66.464,118.153)
C4: (46.474,66.713,118.445)
P: (44.040,70.538,123.529)
C4': (47.529,69.382,122.106)
C2': (48.188,69.112,119.860)
C2: (47.152,65.845,116.544)
N1: (45.921,65.537,116.125)
N3: (47.536,66.426,117.677)
N6: (43.640,65.528,116.502)
N7: (44.325,66.910,119.180)
N9: (46.479,67.323,119.675)
O5': (45.231,69.983,122.625)
O3': (48.139,71.355,120.849)
OP2: (42.804,70.641,122.701)
C3': (47.480,70.104,120.775)
C1': (47.660,67.782,120.399)
C5': (46.556,69.842,123.169)
O4': (47.298,67.993,121.754)
C8: (45.160,67.409,120.056)
O2': (49.591,69.126,120.013)
C6: (44.872,65.838,116.922)
C5: (45.147,66.464,118.153)
C4: (46.474,66.713,118.445)
P: (44.040,70.538,123.529)
C4': (47.529,69.382,122.106)
C2': (48.188,69.112,119.860)
C2: (47.152,65.845,116.544)
N1: (45.921,65.537,116.125)
N3: (47.536,66.426,117.677)
N6: (43.640,65.528,116.502)
N7: (44.325,66.910,119.180)
N9: (46.479,67.323,119.675)
O5': (45.231,69.983,122.625)
O3': (48.139,71.355,120.849)
Image (generated by PyMOL):