Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A2431:A2579
Extra
PDB:
ATOM 1 O3' U A2430 -38.802 134.382 147.745 1.00 0.01 O
ATOM 2 P A A2431 -39.470 133.842 149.092 1.00 14.92 P
ATOM 3 OP1 A A2431 -40.854 133.405 148.766 1.00 14.92 O
ATOM 4 OP2 A A2431 -39.274 134.872 150.133 1.00 14.92 O
ATOM 5 O5' A A2431 -38.551 132.583 149.396 1.00 14.92 O
ATOM 6 C5' A A2431 -37.150 132.761 149.575 1.00 14.92 C
ATOM 7 C4' A A2431 -36.324 132.071 148.506 1.00 14.92 C
ATOM 8 O4' A A2431 -36.326 130.663 148.777 1.00 14.92 O
ATOM 9 C3' A A2431 -36.800 132.234 147.069 1.00 14.92 C
ATOM 10 O3' A A2431 -35.683 132.177 146.164 1.00 14.92 O
ATOM 11 C2' A A2431 -37.678 131.005 146.863 1.00 14.92 C
ATOM 12 O2' A A2431 -37.723 130.541 145.527 1.00 14.92 O
ATOM 13 C1' A A2431 -37.032 129.965 147.785 1.00 14.92 C
ATOM 14 N9 A A2431 -37.998 129.126 148.478 1.00 16.43 N
ATOM 15 C8 A A2431 -38.214 129.132 149.844 1.00 16.43 C
ATOM 16 N7 A A2431 -39.136 128.293 150.257 1.00 16.43 N
ATOM 17 C5 A A2431 -39.558 127.711 149.060 1.00 16.43 C
ATOM 18 C6 A A2431 -40.540 126.726 148.829 1.00 16.43 C
ATOM 19 N6 A A2431 -41.245 126.184 149.854 1.00 16.43 N
ATOM 20 N1 A A2431 -40.735 126.355 147.520 1.00 16.43 N
ATOM 21 C2 A A2431 -39.981 126.936 146.548 1.00 16.43 C
ATOM 22 N3 A A2431 -39.019 127.870 146.637 1.00 16.43 N
ATOM 23 C4 A A2431 -38.865 128.210 147.943 1.00 16.43 C
ATOM 24 P C A2432 -34.768 133.474 145.867 1.00 0.01 P
ATOM 25 OP1 C A2432 -35.662 134.637 145.749 1.00 0.01 O
ATOM 26 OP2 C A2432 -33.882 133.136 144.728 1.00 0.01 O
ATOM 27 O5' C A2432 -33.914 133.610 147.173 1.00 0.01 O
TER
ATOM 1 O3' U B2578 -35.530 127.068 149.173 1.00 19.85 O
ATOM 2 P A B2579 -34.432 126.915 148.062 1.00 5.01 P
ATOM 3 OP1 A B2579 -34.908 127.658 146.872 1.00 5.01 O
ATOM 4 OP2 A B2579 -34.133 125.452 147.955 1.00 5.01 O
ATOM 5 O5' A B2579 -33.200 127.678 148.716 1.00 5.01 O
ATOM 6 C5' A B2579 -32.964 129.050 148.454 1.00 5.01 C
ATOM 7 C4' A B2579 -31.579 129.424 148.873 1.00 5.01 C
ATOM 8 O4' A B2579 -31.302 128.807 150.147 1.00 5.01 O
ATOM 9 C3' A B2579 -30.468 128.918 147.971 1.00 5.01 C
ATOM 10 O3' A B2579 -30.224 129.759 146.856 1.00 5.01 O
ATOM 11 C2' A B2579 -29.283 128.765 148.927 1.00 5.01 C
ATOM 12 O2' A B2579 -28.609 129.992 149.172 1.00 5.01 O
ATOM 13 C1' A B2579 -29.977 128.341 150.194 1.00 5.01 C
ATOM 14 N9 A B2579 -30.003 126.896 150.294 1.00 5.22 N
ATOM 15 C8 A B2579 -30.932 126.019 149.827 1.00 5.22 C
ATOM 16 N7 A B2579 -30.596 124.779 150.073 1.00 5.22 N
ATOM 17 C5 A B2579 -29.373 124.886 150.728 1.00 5.22 C
ATOM 18 C6 A B2579 -28.501 123.935 151.250 1.00 5.22 C
ATOM 19 N6 A B2579 -28.738 122.613 151.189 1.00 5.22 N
ATOM 20 N1 A B2579 -27.365 124.400 151.816 1.00 5.22 N
ATOM 21 C2 A B2579 -27.149 125.711 151.868 1.00 5.22 C
ATOM 22 N3 A B2579 -27.897 126.691 151.422 1.00 5.22 N
ATOM 23 C4 A B2579 -28.991 126.191 150.853 1.00 5.22 C
ATOM 24 P G B2580 -30.280 129.145 145.378 1.00 0.01 P
ATOM 25 OP1 G B2580 -29.953 130.212 144.448 1.00 0.01 O
ATOM 26 OP2 G B2580 -31.575 128.463 145.243 1.00 0.01 O
ATOM 27 O5' G B2580 -29.108 128.095 145.391 1.00 0.01 O
TER
ATOM 2 P A A2431 -39.470 133.842 149.092 1.00 14.92 P
ATOM 3 OP1 A A2431 -40.854 133.405 148.766 1.00 14.92 O
ATOM 4 OP2 A A2431 -39.274 134.872 150.133 1.00 14.92 O
ATOM 5 O5' A A2431 -38.551 132.583 149.396 1.00 14.92 O
ATOM 6 C5' A A2431 -37.150 132.761 149.575 1.00 14.92 C
ATOM 7 C4' A A2431 -36.324 132.071 148.506 1.00 14.92 C
ATOM 8 O4' A A2431 -36.326 130.663 148.777 1.00 14.92 O
ATOM 9 C3' A A2431 -36.800 132.234 147.069 1.00 14.92 C
ATOM 10 O3' A A2431 -35.683 132.177 146.164 1.00 14.92 O
ATOM 11 C2' A A2431 -37.678 131.005 146.863 1.00 14.92 C
ATOM 12 O2' A A2431 -37.723 130.541 145.527 1.00 14.92 O
ATOM 13 C1' A A2431 -37.032 129.965 147.785 1.00 14.92 C
ATOM 14 N9 A A2431 -37.998 129.126 148.478 1.00 16.43 N
ATOM 15 C8 A A2431 -38.214 129.132 149.844 1.00 16.43 C
ATOM 16 N7 A A2431 -39.136 128.293 150.257 1.00 16.43 N
ATOM 17 C5 A A2431 -39.558 127.711 149.060 1.00 16.43 C
ATOM 18 C6 A A2431 -40.540 126.726 148.829 1.00 16.43 C
ATOM 19 N6 A A2431 -41.245 126.184 149.854 1.00 16.43 N
ATOM 20 N1 A A2431 -40.735 126.355 147.520 1.00 16.43 N
ATOM 21 C2 A A2431 -39.981 126.936 146.548 1.00 16.43 C
ATOM 22 N3 A A2431 -39.019 127.870 146.637 1.00 16.43 N
ATOM 23 C4 A A2431 -38.865 128.210 147.943 1.00 16.43 C
ATOM 24 P C A2432 -34.768 133.474 145.867 1.00 0.01 P
ATOM 25 OP1 C A2432 -35.662 134.637 145.749 1.00 0.01 O
ATOM 26 OP2 C A2432 -33.882 133.136 144.728 1.00 0.01 O
ATOM 27 O5' C A2432 -33.914 133.610 147.173 1.00 0.01 O
TER
ATOM 1 O3' U B2578 -35.530 127.068 149.173 1.00 19.85 O
ATOM 2 P A B2579 -34.432 126.915 148.062 1.00 5.01 P
ATOM 3 OP1 A B2579 -34.908 127.658 146.872 1.00 5.01 O
ATOM 4 OP2 A B2579 -34.133 125.452 147.955 1.00 5.01 O
ATOM 5 O5' A B2579 -33.200 127.678 148.716 1.00 5.01 O
ATOM 6 C5' A B2579 -32.964 129.050 148.454 1.00 5.01 C
ATOM 7 C4' A B2579 -31.579 129.424 148.873 1.00 5.01 C
ATOM 8 O4' A B2579 -31.302 128.807 150.147 1.00 5.01 O
ATOM 9 C3' A B2579 -30.468 128.918 147.971 1.00 5.01 C
ATOM 10 O3' A B2579 -30.224 129.759 146.856 1.00 5.01 O
ATOM 11 C2' A B2579 -29.283 128.765 148.927 1.00 5.01 C
ATOM 12 O2' A B2579 -28.609 129.992 149.172 1.00 5.01 O
ATOM 13 C1' A B2579 -29.977 128.341 150.194 1.00 5.01 C
ATOM 14 N9 A B2579 -30.003 126.896 150.294 1.00 5.22 N
ATOM 15 C8 A B2579 -30.932 126.019 149.827 1.00 5.22 C
ATOM 16 N7 A B2579 -30.596 124.779 150.073 1.00 5.22 N
ATOM 17 C5 A B2579 -29.373 124.886 150.728 1.00 5.22 C
ATOM 18 C6 A B2579 -28.501 123.935 151.250 1.00 5.22 C
ATOM 19 N6 A B2579 -28.738 122.613 151.189 1.00 5.22 N
ATOM 20 N1 A B2579 -27.365 124.400 151.816 1.00 5.22 N
ATOM 21 C2 A B2579 -27.149 125.711 151.868 1.00 5.22 C
ATOM 22 N3 A B2579 -27.897 126.691 151.422 1.00 5.22 N
ATOM 23 C4 A B2579 -28.991 126.191 150.853 1.00 5.22 C
ATOM 24 P G B2580 -30.280 129.145 145.378 1.00 0.01 P
ATOM 25 OP1 G B2580 -29.953 130.212 144.448 1.00 0.01 O
ATOM 26 OP2 G B2580 -31.575 128.463 145.243 1.00 0.01 O
ATOM 27 O5' G B2580 -29.108 128.095 145.391 1.00 0.01 O
TER
Atoms:
OP1: (-40.854,133.405,148.766)
OP2: (-39.274,134.872,150.133)
C3': (-36.800,132.234,147.069)
C1': (-37.032,129.965,147.785)
C5': (-37.150,132.761,149.575)
O4': (-36.326,130.663,148.777)
C8: (-38.214,129.132,149.844)
O2': (-37.723,130.541,145.527)
C6: (-40.540,126.726,148.829)
C5: (-39.558,127.711,149.060)
C4: (-38.865,128.210,147.943)
P: (-39.470,133.842,149.092)
C4': (-36.324,132.071,148.506)
C2': (-37.678,131.005,146.863)
C2: (-39.981,126.936,146.548)
N1: (-40.735,126.355,147.520)
N3: (-39.019,127.870,146.637)
N6: (-41.245,126.184,149.854)
N7: (-39.136,128.293,150.257)
N9: (-37.998,129.126,148.478)
O5': (-38.551,132.583,149.396)
O3': (-35.683,132.177,146.164)
OP2: (-39.274,134.872,150.133)
C3': (-36.800,132.234,147.069)
C1': (-37.032,129.965,147.785)
C5': (-37.150,132.761,149.575)
O4': (-36.326,130.663,148.777)
C8: (-38.214,129.132,149.844)
O2': (-37.723,130.541,145.527)
C6: (-40.540,126.726,148.829)
C5: (-39.558,127.711,149.060)
C4: (-38.865,128.210,147.943)
P: (-39.470,133.842,149.092)
C4': (-36.324,132.071,148.506)
C2': (-37.678,131.005,146.863)
C2: (-39.981,126.936,146.548)
N1: (-40.735,126.355,147.520)
N3: (-39.019,127.870,146.637)
N6: (-41.245,126.184,149.854)
N7: (-39.136,128.293,150.257)
N9: (-37.998,129.126,148.478)
O5': (-38.551,132.583,149.396)
O3': (-35.683,132.177,146.164)
OP1: (-34.908,127.658,146.872)
OP2: (-34.133,125.452,147.955)
C3': (-30.468,128.918,147.971)
C1': (-29.977,128.341,150.194)
C5': (-32.964,129.050,148.454)
O4': (-31.302,128.807,150.147)
C8: (-30.932,126.019,149.827)
O2': (-28.609,129.992,149.172)
C6: (-28.501,123.935,151.250)
C5: (-29.373,124.886,150.728)
C4: (-28.991,126.191,150.853)
P: (-34.432,126.915,148.062)
C4': (-31.579,129.424,148.873)
C2': (-29.283,128.765,148.927)
C2: (-27.149,125.711,151.868)
N1: (-27.365,124.400,151.816)
N3: (-27.897,126.691,151.422)
N6: (-28.738,122.613,151.189)
N7: (-30.596,124.779,150.073)
N9: (-30.003,126.896,150.294)
O5': (-33.200,127.678,148.716)
O3': (-30.224,129.759,146.856)
OP2: (-34.133,125.452,147.955)
C3': (-30.468,128.918,147.971)
C1': (-29.977,128.341,150.194)
C5': (-32.964,129.050,148.454)
O4': (-31.302,128.807,150.147)
C8: (-30.932,126.019,149.827)
O2': (-28.609,129.992,149.172)
C6: (-28.501,123.935,151.250)
C5: (-29.373,124.886,150.728)
C4: (-28.991,126.191,150.853)
P: (-34.432,126.915,148.062)
C4': (-31.579,129.424,148.873)
C2': (-29.283,128.765,148.927)
C2: (-27.149,125.711,151.868)
N1: (-27.365,124.400,151.816)
N3: (-27.897,126.691,151.422)
N6: (-28.738,122.613,151.189)
N7: (-30.596,124.779,150.073)
N9: (-30.003,126.896,150.294)
O5': (-33.200,127.678,148.716)
O3': (-30.224,129.759,146.856)
Image (generated by PyMOL):