Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0942:979
Extra
PDB:
ATOM 1 O3' U A 941 55.677 70.975 108.508 1.00 43.21 O
ATOM 2 P A A 942 55.835 70.653 110.070 1.00 44.45 P
ATOM 3 OP1 A A 942 56.703 71.708 110.650 1.00 45.19 O
ATOM 4 OP2 A A 942 56.216 69.231 110.234 1.00 45.20 O
ATOM 5 O5' A A 942 54.356 70.840 110.635 1.00 44.86 O
ATOM 6 C5' A A 942 53.702 72.129 110.614 1.00 45.24 C
ATOM 7 C4' A A 942 52.374 72.052 111.331 1.00 45.22 C
ATOM 8 O4' A A 942 51.455 71.219 110.579 1.00 46.41 O
ATOM 9 C3' A A 942 52.429 71.395 112.696 1.00 45.67 C
ATOM 10 O3' A A 942 52.865 72.299 113.694 1.00 46.85 O
ATOM 11 C2' A A 942 50.997 70.911 112.887 1.00 45.93 C
ATOM 12 O2' A A 942 50.089 71.926 113.258 1.00 46.88 O
ATOM 13 C1' A A 942 50.655 70.454 111.472 1.00 45.18 C
ATOM 14 N9 A A 942 50.925 69.031 111.244 1.00 44.18 N
ATOM 15 C8 A A 942 51.924 68.458 110.490 1.00 43.43 C
ATOM 16 N7 A A 942 51.878 67.149 110.460 1.00 43.57 N
ATOM 17 C5 A A 942 50.781 66.836 111.252 1.00 43.93 C
ATOM 18 C6 A A 942 50.189 65.612 111.611 1.00 43.82 C
ATOM 19 N6 A A 942 50.630 64.421 111.206 1.00 43.62 N
ATOM 20 N1 A A 942 49.108 65.654 112.410 1.00 44.02 N
ATOM 21 C2 A A 942 48.656 66.845 112.816 1.00 44.17 C
ATOM 22 N3 A A 942 49.118 68.058 112.545 1.00 42.83 N
ATOM 23 C4 A A 942 50.193 67.985 111.748 1.00 43.24 C
ATOM 24 P G A 943 53.894 71.796 114.814 1.00 47.34 P
ATOM 25 OP1 G A 943 54.107 72.904 115.775 1.00 48.34 O
ATOM 26 OP2 G A 943 55.053 71.200 114.118 1.00 46.64 O
ATOM 27 O5' G A 943 53.112 70.617 115.542 1.00 47.59 O
TER
ATOM 1 O3' U B 78 43.768 69.136 124.194 1.00 53.74 O
ATOM 2 P A B 79 43.972 70.332 123.140 1.00 54.55 P
ATOM 3 OP1 A B 79 44.508 71.493 123.895 1.00 54.20 O
ATOM 4 OP2 A B 79 42.717 70.487 122.363 1.00 54.60 O
ATOM 5 O5' A B 79 45.123 69.794 122.175 1.00 52.15 O
ATOM 6 C5' A B 79 46.473 69.675 122.657 1.00 49.25 C
ATOM 7 C4' A B 79 47.406 69.223 121.558 1.00 49.18 C
ATOM 8 O4' A B 79 47.160 67.838 121.204 1.00 49.52 O
ATOM 9 C3' A B 79 47.319 69.951 120.232 1.00 49.37 C
ATOM 10 O3' A B 79 47.977 71.210 120.290 1.00 50.64 O
ATOM 11 C2' A B 79 48.023 68.968 119.302 1.00 49.36 C
ATOM 12 O2' A B 79 49.427 69.001 119.425 1.00 51.95 O
ATOM 13 C1' A B 79 47.534 67.625 119.852 1.00 49.02 C
ATOM 14 N9 A B 79 46.378 67.115 119.120 1.00 48.19 N
ATOM 15 C8 A B 79 45.062 67.121 119.509 1.00 48.75 C
ATOM 16 N7 A B 79 44.245 66.618 118.618 1.00 48.87 N
ATOM 17 C5 A B 79 45.079 66.248 117.573 1.00 47.96 C
ATOM 18 C6 A B 79 44.819 65.662 116.323 1.00 47.58 C
ATOM 19 N6 A B 79 43.593 65.335 115.901 1.00 45.92 N
ATOM 20 N1 A B 79 45.874 65.424 115.511 1.00 47.02 N
ATOM 21 C2 A B 79 47.098 65.762 115.938 1.00 47.08 C
ATOM 22 N3 A B 79 47.467 66.321 117.089 1.00 46.88 N
ATOM 23 C4 A B 79 46.397 66.542 117.871 1.00 47.77 C
ATOM 24 P C B 80 47.293 72.503 119.622 1.00 51.60 P
ATOM 25 OP1 C B 80 48.226 73.640 119.848 1.00 50.89 O
ATOM 26 OP2 C B 80 45.879 72.608 120.091 1.00 50.11 O
ATOM 27 O5' C B 80 47.287 72.160 118.067 1.00 49.03 O
TER
ATOM 2 P A A 942 55.835 70.653 110.070 1.00 44.45 P
ATOM 3 OP1 A A 942 56.703 71.708 110.650 1.00 45.19 O
ATOM 4 OP2 A A 942 56.216 69.231 110.234 1.00 45.20 O
ATOM 5 O5' A A 942 54.356 70.840 110.635 1.00 44.86 O
ATOM 6 C5' A A 942 53.702 72.129 110.614 1.00 45.24 C
ATOM 7 C4' A A 942 52.374 72.052 111.331 1.00 45.22 C
ATOM 8 O4' A A 942 51.455 71.219 110.579 1.00 46.41 O
ATOM 9 C3' A A 942 52.429 71.395 112.696 1.00 45.67 C
ATOM 10 O3' A A 942 52.865 72.299 113.694 1.00 46.85 O
ATOM 11 C2' A A 942 50.997 70.911 112.887 1.00 45.93 C
ATOM 12 O2' A A 942 50.089 71.926 113.258 1.00 46.88 O
ATOM 13 C1' A A 942 50.655 70.454 111.472 1.00 45.18 C
ATOM 14 N9 A A 942 50.925 69.031 111.244 1.00 44.18 N
ATOM 15 C8 A A 942 51.924 68.458 110.490 1.00 43.43 C
ATOM 16 N7 A A 942 51.878 67.149 110.460 1.00 43.57 N
ATOM 17 C5 A A 942 50.781 66.836 111.252 1.00 43.93 C
ATOM 18 C6 A A 942 50.189 65.612 111.611 1.00 43.82 C
ATOM 19 N6 A A 942 50.630 64.421 111.206 1.00 43.62 N
ATOM 20 N1 A A 942 49.108 65.654 112.410 1.00 44.02 N
ATOM 21 C2 A A 942 48.656 66.845 112.816 1.00 44.17 C
ATOM 22 N3 A A 942 49.118 68.058 112.545 1.00 42.83 N
ATOM 23 C4 A A 942 50.193 67.985 111.748 1.00 43.24 C
ATOM 24 P G A 943 53.894 71.796 114.814 1.00 47.34 P
ATOM 25 OP1 G A 943 54.107 72.904 115.775 1.00 48.34 O
ATOM 26 OP2 G A 943 55.053 71.200 114.118 1.00 46.64 O
ATOM 27 O5' G A 943 53.112 70.617 115.542 1.00 47.59 O
TER
ATOM 1 O3' U B 78 43.768 69.136 124.194 1.00 53.74 O
ATOM 2 P A B 79 43.972 70.332 123.140 1.00 54.55 P
ATOM 3 OP1 A B 79 44.508 71.493 123.895 1.00 54.20 O
ATOM 4 OP2 A B 79 42.717 70.487 122.363 1.00 54.60 O
ATOM 5 O5' A B 79 45.123 69.794 122.175 1.00 52.15 O
ATOM 6 C5' A B 79 46.473 69.675 122.657 1.00 49.25 C
ATOM 7 C4' A B 79 47.406 69.223 121.558 1.00 49.18 C
ATOM 8 O4' A B 79 47.160 67.838 121.204 1.00 49.52 O
ATOM 9 C3' A B 79 47.319 69.951 120.232 1.00 49.37 C
ATOM 10 O3' A B 79 47.977 71.210 120.290 1.00 50.64 O
ATOM 11 C2' A B 79 48.023 68.968 119.302 1.00 49.36 C
ATOM 12 O2' A B 79 49.427 69.001 119.425 1.00 51.95 O
ATOM 13 C1' A B 79 47.534 67.625 119.852 1.00 49.02 C
ATOM 14 N9 A B 79 46.378 67.115 119.120 1.00 48.19 N
ATOM 15 C8 A B 79 45.062 67.121 119.509 1.00 48.75 C
ATOM 16 N7 A B 79 44.245 66.618 118.618 1.00 48.87 N
ATOM 17 C5 A B 79 45.079 66.248 117.573 1.00 47.96 C
ATOM 18 C6 A B 79 44.819 65.662 116.323 1.00 47.58 C
ATOM 19 N6 A B 79 43.593 65.335 115.901 1.00 45.92 N
ATOM 20 N1 A B 79 45.874 65.424 115.511 1.00 47.02 N
ATOM 21 C2 A B 79 47.098 65.762 115.938 1.00 47.08 C
ATOM 22 N3 A B 79 47.467 66.321 117.089 1.00 46.88 N
ATOM 23 C4 A B 79 46.397 66.542 117.871 1.00 47.77 C
ATOM 24 P C B 80 47.293 72.503 119.622 1.00 51.60 P
ATOM 25 OP1 C B 80 48.226 73.640 119.848 1.00 50.89 O
ATOM 26 OP2 C B 80 45.879 72.608 120.091 1.00 50.11 O
ATOM 27 O5' C B 80 47.287 72.160 118.067 1.00 49.03 O
TER
Atoms:
OP1: (56.703,71.708,110.650)
OP2: (56.216,69.231,110.234)
C3': (52.429,71.395,112.696)
C1': (50.655,70.454,111.472)
C5': (53.702,72.129,110.614)
O4': (51.455,71.219,110.579)
C8: (51.924,68.458,110.490)
O2': (50.089,71.926,113.258)
C6: (50.189,65.612,111.611)
C5: (50.781,66.836,111.252)
C4: (50.193,67.985,111.748)
P: (55.835,70.653,110.070)
C4': (52.374,72.052,111.331)
C2': (50.997,70.911,112.887)
C2: (48.656,66.845,112.816)
N1: (49.108,65.654,112.410)
N3: (49.118,68.058,112.545)
N6: (50.630,64.421,111.206)
N7: (51.878,67.149,110.460)
N9: (50.925,69.031,111.244)
O5': (54.356,70.840,110.635)
O3': (52.865,72.299,113.694)
OP2: (56.216,69.231,110.234)
C3': (52.429,71.395,112.696)
C1': (50.655,70.454,111.472)
C5': (53.702,72.129,110.614)
O4': (51.455,71.219,110.579)
C8: (51.924,68.458,110.490)
O2': (50.089,71.926,113.258)
C6: (50.189,65.612,111.611)
C5: (50.781,66.836,111.252)
C4: (50.193,67.985,111.748)
P: (55.835,70.653,110.070)
C4': (52.374,72.052,111.331)
C2': (50.997,70.911,112.887)
C2: (48.656,66.845,112.816)
N1: (49.108,65.654,112.410)
N3: (49.118,68.058,112.545)
N6: (50.630,64.421,111.206)
N7: (51.878,67.149,110.460)
N9: (50.925,69.031,111.244)
O5': (54.356,70.840,110.635)
O3': (52.865,72.299,113.694)
OP1: (44.508,71.493,123.895)
OP2: (42.717,70.487,122.363)
C3': (47.319,69.951,120.232)
C1': (47.534,67.625,119.852)
C5': (46.473,69.675,122.657)
O4': (47.160,67.838,121.204)
C8: (45.062,67.121,119.509)
O2': (49.427,69.001,119.425)
C6: (44.819,65.662,116.323)
C5: (45.079,66.248,117.573)
C4: (46.397,66.542,117.871)
P: (43.972,70.332,123.140)
C4': (47.406,69.223,121.558)
C2': (48.023,68.968,119.302)
C2: (47.098,65.762,115.938)
N1: (45.874,65.424,115.511)
N3: (47.467,66.321,117.089)
N6: (43.593,65.335,115.901)
N7: (44.245,66.618,118.618)
N9: (46.378,67.115,119.120)
O5': (45.123,69.794,122.175)
O3': (47.977,71.210,120.290)
OP2: (42.717,70.487,122.363)
C3': (47.319,69.951,120.232)
C1': (47.534,67.625,119.852)
C5': (46.473,69.675,122.657)
O4': (47.160,67.838,121.204)
C8: (45.062,67.121,119.509)
O2': (49.427,69.001,119.425)
C6: (44.819,65.662,116.323)
C5: (45.079,66.248,117.573)
C4: (46.397,66.542,117.871)
P: (43.972,70.332,123.140)
C4': (47.406,69.223,121.558)
C2': (48.023,68.968,119.302)
C2: (47.098,65.762,115.938)
N1: (45.874,65.424,115.511)
N3: (47.467,66.321,117.089)
N6: (43.593,65.335,115.901)
N7: (44.245,66.618,118.618)
N9: (46.378,67.115,119.120)
O5': (45.123,69.794,122.175)
O3': (47.977,71.210,120.290)
Image (generated by PyMOL):