Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1U8D:A51:A18
Extra
PDB:
ATOM 1 O3' A A 50 40.259 22.339 4.329 1.00 13.50 O
ATOM 2 P A A 51 39.022 23.077 3.643 1.00 14.28 P
ATOM 3 OP1 A A 51 39.543 23.558 2.325 1.00 15.32 O
ATOM 4 OP2 A A 51 38.338 24.024 4.542 1.00 14.63 O
ATOM 5 O5' A A 51 38.069 21.846 3.338 1.00 13.61 O
ATOM 6 C5' A A 51 37.465 21.085 4.393 1.00 11.48 C
ATOM 7 C4' A A 51 37.723 19.608 4.177 1.00 10.84 C
ATOM 8 O4' A A 51 39.051 19.241 4.669 1.00 10.26 O
ATOM 9 C3' A A 51 36.836 18.669 4.967 1.00 10.58 C
ATOM 10 O3' A A 51 35.542 18.590 4.389 1.00 8.43 O
ATOM 11 C2' A A 51 37.616 17.369 4.831 1.00 10.04 C
ATOM 12 O2' A A 51 37.536 16.826 3.529 1.00 11.06 O
ATOM 13 C1' A A 51 39.042 17.870 5.094 1.00 10.87 C
ATOM 14 N9 A A 51 39.240 17.798 6.548 1.00 10.17 N
ATOM 15 C8 A A 51 39.155 18.790 7.496 1.00 10.03 C
ATOM 16 N7 A A 51 39.261 18.348 8.733 1.00 8.56 N
ATOM 17 C5 A A 51 39.441 16.982 8.588 1.00 6.54 C
ATOM 18 C6 A A 51 39.556 15.933 9.533 1.00 10.49 C
ATOM 19 N6 A A 51 39.492 16.109 10.872 1.00 8.52 N
ATOM 20 N1 A A 51 39.716 14.683 9.059 1.00 10.25 N
ATOM 21 C2 A A 51 39.726 14.497 7.720 1.00 9.28 C
ATOM 22 N3 A A 51 39.599 15.400 6.739 1.00 6.99 N
ATOM 23 C4 A A 51 39.470 16.634 7.247 1.00 7.89 C
ATOM 24 P U A 52 34.254 18.628 5.328 1.00 7.15 P
ATOM 25 OP1 U A 52 33.113 18.369 4.451 1.00 8.19 O
ATOM 26 OP2 U A 52 34.265 19.889 6.140 1.00 10.54 O
ATOM 27 O5' U A 52 34.515 17.404 6.352 1.00 9.66 O
TER
ATOM 1 O3' G B 17 38.203 26.883 17.614 1.00 14.68 O
ATOM 2 P A B 18 39.686 26.342 17.495 1.00 15.61 P
ATOM 3 OP1 A B 18 40.371 26.864 18.691 1.00 19.56 O
ATOM 4 OP2 A B 18 40.255 26.557 16.151 1.00 17.09 O
ATOM 5 O5' A B 18 39.561 24.752 17.619 1.00 14.10 O
ATOM 6 C5' A B 18 39.033 24.156 18.788 1.00 14.10 C
ATOM 7 C4' A B 18 38.951 22.650 18.615 1.00 13.63 C
ATOM 8 O4' A B 18 37.996 22.286 17.569 1.00 13.30 O
ATOM 9 C3' A B 18 40.222 21.955 18.171 1.00 13.78 C
ATOM 10 O3' A B 18 41.120 21.848 19.264 1.00 13.31 O
ATOM 11 C2' A B 18 39.672 20.607 17.712 1.00 12.75 C
ATOM 12 O2' A B 18 39.299 19.776 18.802 1.00 12.98 O
ATOM 13 C1' A B 18 38.400 21.050 16.987 1.00 12.61 C
ATOM 14 N9 A B 18 38.609 21.236 15.550 1.00 12.88 N
ATOM 15 C8 A B 18 38.628 22.381 14.794 1.00 11.71 C
ATOM 16 N7 A B 18 38.816 22.157 13.502 1.00 10.33 N
ATOM 17 C5 A B 18 38.927 20.782 13.415 1.00 9.80 C
ATOM 18 C6 A B 18 39.116 19.908 12.324 1.00 10.29 C
ATOM 19 N6 A B 18 39.234 20.309 11.050 1.00 9.60 N
ATOM 20 N1 A B 18 39.178 18.588 12.588 1.00 9.49 N
ATOM 21 C2 A B 18 39.048 18.179 13.852 1.00 9.84 C
ATOM 22 N3 A B 18 38.857 18.900 14.964 1.00 11.60 N
ATOM 23 C4 A B 18 38.811 20.204 14.669 1.00 11.27 C
ATOM 24 P U B 19 42.687 21.969 19.023 1.00 15.81 P
ATOM 25 OP1 U B 19 43.252 22.026 20.387 1.00 17.18 O
ATOM 26 OP2 U B 19 42.941 23.110 18.071 1.00 16.71 O
ATOM 27 O5' U B 19 43.104 20.594 18.319 1.00 15.71 O
TER
ATOM 2 P A A 51 39.022 23.077 3.643 1.00 14.28 P
ATOM 3 OP1 A A 51 39.543 23.558 2.325 1.00 15.32 O
ATOM 4 OP2 A A 51 38.338 24.024 4.542 1.00 14.63 O
ATOM 5 O5' A A 51 38.069 21.846 3.338 1.00 13.61 O
ATOM 6 C5' A A 51 37.465 21.085 4.393 1.00 11.48 C
ATOM 7 C4' A A 51 37.723 19.608 4.177 1.00 10.84 C
ATOM 8 O4' A A 51 39.051 19.241 4.669 1.00 10.26 O
ATOM 9 C3' A A 51 36.836 18.669 4.967 1.00 10.58 C
ATOM 10 O3' A A 51 35.542 18.590 4.389 1.00 8.43 O
ATOM 11 C2' A A 51 37.616 17.369 4.831 1.00 10.04 C
ATOM 12 O2' A A 51 37.536 16.826 3.529 1.00 11.06 O
ATOM 13 C1' A A 51 39.042 17.870 5.094 1.00 10.87 C
ATOM 14 N9 A A 51 39.240 17.798 6.548 1.00 10.17 N
ATOM 15 C8 A A 51 39.155 18.790 7.496 1.00 10.03 C
ATOM 16 N7 A A 51 39.261 18.348 8.733 1.00 8.56 N
ATOM 17 C5 A A 51 39.441 16.982 8.588 1.00 6.54 C
ATOM 18 C6 A A 51 39.556 15.933 9.533 1.00 10.49 C
ATOM 19 N6 A A 51 39.492 16.109 10.872 1.00 8.52 N
ATOM 20 N1 A A 51 39.716 14.683 9.059 1.00 10.25 N
ATOM 21 C2 A A 51 39.726 14.497 7.720 1.00 9.28 C
ATOM 22 N3 A A 51 39.599 15.400 6.739 1.00 6.99 N
ATOM 23 C4 A A 51 39.470 16.634 7.247 1.00 7.89 C
ATOM 24 P U A 52 34.254 18.628 5.328 1.00 7.15 P
ATOM 25 OP1 U A 52 33.113 18.369 4.451 1.00 8.19 O
ATOM 26 OP2 U A 52 34.265 19.889 6.140 1.00 10.54 O
ATOM 27 O5' U A 52 34.515 17.404 6.352 1.00 9.66 O
TER
ATOM 1 O3' G B 17 38.203 26.883 17.614 1.00 14.68 O
ATOM 2 P A B 18 39.686 26.342 17.495 1.00 15.61 P
ATOM 3 OP1 A B 18 40.371 26.864 18.691 1.00 19.56 O
ATOM 4 OP2 A B 18 40.255 26.557 16.151 1.00 17.09 O
ATOM 5 O5' A B 18 39.561 24.752 17.619 1.00 14.10 O
ATOM 6 C5' A B 18 39.033 24.156 18.788 1.00 14.10 C
ATOM 7 C4' A B 18 38.951 22.650 18.615 1.00 13.63 C
ATOM 8 O4' A B 18 37.996 22.286 17.569 1.00 13.30 O
ATOM 9 C3' A B 18 40.222 21.955 18.171 1.00 13.78 C
ATOM 10 O3' A B 18 41.120 21.848 19.264 1.00 13.31 O
ATOM 11 C2' A B 18 39.672 20.607 17.712 1.00 12.75 C
ATOM 12 O2' A B 18 39.299 19.776 18.802 1.00 12.98 O
ATOM 13 C1' A B 18 38.400 21.050 16.987 1.00 12.61 C
ATOM 14 N9 A B 18 38.609 21.236 15.550 1.00 12.88 N
ATOM 15 C8 A B 18 38.628 22.381 14.794 1.00 11.71 C
ATOM 16 N7 A B 18 38.816 22.157 13.502 1.00 10.33 N
ATOM 17 C5 A B 18 38.927 20.782 13.415 1.00 9.80 C
ATOM 18 C6 A B 18 39.116 19.908 12.324 1.00 10.29 C
ATOM 19 N6 A B 18 39.234 20.309 11.050 1.00 9.60 N
ATOM 20 N1 A B 18 39.178 18.588 12.588 1.00 9.49 N
ATOM 21 C2 A B 18 39.048 18.179 13.852 1.00 9.84 C
ATOM 22 N3 A B 18 38.857 18.900 14.964 1.00 11.60 N
ATOM 23 C4 A B 18 38.811 20.204 14.669 1.00 11.27 C
ATOM 24 P U B 19 42.687 21.969 19.023 1.00 15.81 P
ATOM 25 OP1 U B 19 43.252 22.026 20.387 1.00 17.18 O
ATOM 26 OP2 U B 19 42.941 23.110 18.071 1.00 16.71 O
ATOM 27 O5' U B 19 43.104 20.594 18.319 1.00 15.71 O
TER
Atoms:
OP1: (39.543,23.558,2.325)
OP2: (38.338,24.024,4.542)
C3': (36.836,18.669,4.967)
C1': (39.042,17.870,5.094)
C5': (37.465,21.085,4.393)
O4': (39.051,19.241,4.669)
C8: (39.155,18.790,7.496)
O2': (37.536,16.826,3.529)
C6: (39.556,15.933,9.533)
C5: (39.441,16.982,8.588)
C4: (39.470,16.634,7.247)
P: (39.022,23.077,3.643)
C4': (37.723,19.608,4.177)
C2': (37.616,17.369,4.831)
C2: (39.726,14.497,7.720)
N1: (39.716,14.683,9.059)
N3: (39.599,15.400,6.739)
N6: (39.492,16.109,10.872)
N7: (39.261,18.348,8.733)
N9: (39.240,17.798,6.548)
O5': (38.069,21.846,3.338)
O3': (35.542,18.590,4.389)
OP2: (38.338,24.024,4.542)
C3': (36.836,18.669,4.967)
C1': (39.042,17.870,5.094)
C5': (37.465,21.085,4.393)
O4': (39.051,19.241,4.669)
C8: (39.155,18.790,7.496)
O2': (37.536,16.826,3.529)
C6: (39.556,15.933,9.533)
C5: (39.441,16.982,8.588)
C4: (39.470,16.634,7.247)
P: (39.022,23.077,3.643)
C4': (37.723,19.608,4.177)
C2': (37.616,17.369,4.831)
C2: (39.726,14.497,7.720)
N1: (39.716,14.683,9.059)
N3: (39.599,15.400,6.739)
N6: (39.492,16.109,10.872)
N7: (39.261,18.348,8.733)
N9: (39.240,17.798,6.548)
O5': (38.069,21.846,3.338)
O3': (35.542,18.590,4.389)
OP1: (40.371,26.864,18.691)
OP2: (40.255,26.557,16.151)
C3': (40.222,21.955,18.171)
C1': (38.400,21.050,16.987)
C5': (39.033,24.156,18.788)
O4': (37.996,22.286,17.569)
C8: (38.628,22.381,14.794)
O2': (39.299,19.776,18.802)
C6: (39.116,19.908,12.324)
C5: (38.927,20.782,13.415)
C4: (38.811,20.204,14.669)
P: (39.686,26.342,17.495)
C4': (38.951,22.650,18.615)
C2': (39.672,20.607,17.712)
C2: (39.048,18.179,13.852)
N1: (39.178,18.588,12.588)
N3: (38.857,18.900,14.964)
N6: (39.234,20.309,11.050)
N7: (38.816,22.157,13.502)
N9: (38.609,21.236,15.550)
O5': (39.561,24.752,17.619)
O3': (41.120,21.848,19.264)
OP2: (40.255,26.557,16.151)
C3': (40.222,21.955,18.171)
C1': (38.400,21.050,16.987)
C5': (39.033,24.156,18.788)
O4': (37.996,22.286,17.569)
C8: (38.628,22.381,14.794)
O2': (39.299,19.776,18.802)
C6: (39.116,19.908,12.324)
C5: (38.927,20.782,13.415)
C4: (38.811,20.204,14.669)
P: (39.686,26.342,17.495)
C4': (38.951,22.650,18.615)
C2': (39.672,20.607,17.712)
C2: (39.048,18.179,13.852)
N1: (39.178,18.588,12.588)
N3: (38.857,18.900,14.964)
N6: (39.234,20.309,11.050)
N7: (38.816,22.157,13.502)
N9: (38.609,21.236,15.550)
O5': (39.561,24.752,17.619)
O3': (41.120,21.848,19.264)
Image (generated by PyMOL):