Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:52561:52709
Extra
PDB:
ATOM 1 O3' U A2560 160.290 -4.079 224.966 1.00 29.85 O
ATOM 2 P A A2561 158.994 -3.417 225.592 1.00 38.92 P
ATOM 3 OP1 A A2561 159.068 -3.590 227.043 1.00 38.71 O
ATOM 4 OP2 A A2561 157.835 -3.952 224.873 1.00 39.04 O
ATOM 5 O5' A A2561 159.201 -1.925 225.212 1.00 38.89 O
ATOM 6 C5' A A2561 159.182 -1.553 223.854 1.00 39.09 C
ATOM 7 C4' A A2561 160.442 -0.861 223.469 1.00 39.16 C
ATOM 8 O4' A A2561 160.528 0.361 224.206 1.00 38.96 O
ATOM 9 C3' A A2561 161.719 -1.612 223.786 1.00 39.21 C
ATOM 10 O3' A A2561 162.711 -1.251 222.854 1.00 39.40 O
ATOM 11 C2' A A2561 162.105 -1.089 225.145 1.00 38.97 C
ATOM 12 O2' A A2561 163.483 -1.149 225.410 1.00 39.00 O
ATOM 13 C1' A A2561 161.628 0.332 225.082 1.00 38.87 C
ATOM 14 N9 A A2561 161.135 0.808 226.330 1.00 38.62 N
ATOM 15 C8 A A2561 159.811 0.870 226.516 1.00 38.54 C
ATOM 16 N7 A A2561 159.485 1.369 227.655 1.00 38.33 N
ATOM 17 C5 A A2561 160.702 1.636 228.229 1.00 38.28 C
ATOM 18 C6 A A2561 160.967 2.197 229.472 1.00 38.09 C
ATOM 19 N6 A A2561 159.977 2.526 230.298 1.00 37.92 N
ATOM 20 N1 A A2561 162.266 2.394 229.787 1.00 38.10 N
ATOM 21 C2 A A2561 163.209 1.995 228.866 1.00 38.29 C
ATOM 22 N3 A A2561 163.108 1.480 227.644 1.00 38.49 N
ATOM 23 C4 A A2561 161.773 1.327 227.406 1.00 38.46 C
ATOM 24 P C A2562 162.817 -2.089 221.534 1.00 40.33 P
ATOM 25 OP1 C A2562 162.482 -3.490 221.893 1.00 40.35 O
ATOM 26 OP2 C A2562 164.132 -1.772 220.924 1.00 40.50 O
ATOM 27 O5' C A2562 161.671 -1.474 220.656 1.00 40.39 O
TER
ATOM 1 O3' U B2708 161.274 4.054 225.500 1.00 39.80 O
ATOM 2 P A B2709 162.607 4.302 224.665 1.00 35.82 P
ATOM 3 OP1 A B2709 163.410 3.068 224.734 1.00 35.90 O
ATOM 4 OP2 A B2709 163.170 5.495 225.172 1.00 35.73 O
ATOM 5 O5' A B2709 162.075 4.528 223.199 1.00 36.03 O
ATOM 6 C5' A B2709 161.958 3.448 222.297 1.00 36.23 C
ATOM 7 C4' A B2709 161.556 3.942 220.949 1.00 36.43 C
ATOM 8 O4' A B2709 160.572 4.991 221.122 1.00 36.32 O
ATOM 9 C3' A B2709 162.658 4.624 220.151 1.00 36.61 C
ATOM 10 O3' A B2709 163.526 3.713 219.483 1.00 36.82 O
ATOM 11 C2' A B2709 161.867 5.508 219.213 1.00 36.72 C
ATOM 12 O2' A B2709 161.276 4.720 218.201 1.00 36.92 O
ATOM 13 C1' A B2709 160.756 5.993 220.133 1.00 36.48 C
ATOM 14 N9 A B2709 161.108 7.279 220.780 1.00 36.34 N
ATOM 15 C8 A B2709 161.485 7.539 222.087 1.00 36.12 C
ATOM 16 N7 A B2709 161.778 8.786 222.348 1.00 36.06 N
ATOM 17 C5 A B2709 161.588 9.407 221.132 1.00 36.26 C
ATOM 18 C6 A B2709 161.727 10.746 220.756 1.00 36.33 C
ATOM 19 N6 A B2709 162.113 11.717 221.592 1.00 36.19 N
ATOM 20 N1 A B2709 161.421 11.016 219.450 1.00 36.56 N
ATOM 21 C2 A B2709 161.010 10.042 218.626 1.00 36.70 C
ATOM 22 N3 A B2709 160.857 8.746 218.885 1.00 36.66 N
ATOM 23 C4 A B2709 161.164 8.494 220.162 1.00 36.44 C
ATOM 24 P G B2710 165.097 3.682 219.829 1.00 35.93 P
ATOM 25 OP1 G B2710 165.540 2.296 219.779 1.00 36.03 O
ATOM 26 OP2 G B2710 165.248 4.399 221.083 1.00 35.68 O
ATOM 27 O5' G B2710 165.780 4.481 218.619 1.00 36.18 O
TER
ATOM 2 P A A2561 158.994 -3.417 225.592 1.00 38.92 P
ATOM 3 OP1 A A2561 159.068 -3.590 227.043 1.00 38.71 O
ATOM 4 OP2 A A2561 157.835 -3.952 224.873 1.00 39.04 O
ATOM 5 O5' A A2561 159.201 -1.925 225.212 1.00 38.89 O
ATOM 6 C5' A A2561 159.182 -1.553 223.854 1.00 39.09 C
ATOM 7 C4' A A2561 160.442 -0.861 223.469 1.00 39.16 C
ATOM 8 O4' A A2561 160.528 0.361 224.206 1.00 38.96 O
ATOM 9 C3' A A2561 161.719 -1.612 223.786 1.00 39.21 C
ATOM 10 O3' A A2561 162.711 -1.251 222.854 1.00 39.40 O
ATOM 11 C2' A A2561 162.105 -1.089 225.145 1.00 38.97 C
ATOM 12 O2' A A2561 163.483 -1.149 225.410 1.00 39.00 O
ATOM 13 C1' A A2561 161.628 0.332 225.082 1.00 38.87 C
ATOM 14 N9 A A2561 161.135 0.808 226.330 1.00 38.62 N
ATOM 15 C8 A A2561 159.811 0.870 226.516 1.00 38.54 C
ATOM 16 N7 A A2561 159.485 1.369 227.655 1.00 38.33 N
ATOM 17 C5 A A2561 160.702 1.636 228.229 1.00 38.28 C
ATOM 18 C6 A A2561 160.967 2.197 229.472 1.00 38.09 C
ATOM 19 N6 A A2561 159.977 2.526 230.298 1.00 37.92 N
ATOM 20 N1 A A2561 162.266 2.394 229.787 1.00 38.10 N
ATOM 21 C2 A A2561 163.209 1.995 228.866 1.00 38.29 C
ATOM 22 N3 A A2561 163.108 1.480 227.644 1.00 38.49 N
ATOM 23 C4 A A2561 161.773 1.327 227.406 1.00 38.46 C
ATOM 24 P C A2562 162.817 -2.089 221.534 1.00 40.33 P
ATOM 25 OP1 C A2562 162.482 -3.490 221.893 1.00 40.35 O
ATOM 26 OP2 C A2562 164.132 -1.772 220.924 1.00 40.50 O
ATOM 27 O5' C A2562 161.671 -1.474 220.656 1.00 40.39 O
TER
ATOM 1 O3' U B2708 161.274 4.054 225.500 1.00 39.80 O
ATOM 2 P A B2709 162.607 4.302 224.665 1.00 35.82 P
ATOM 3 OP1 A B2709 163.410 3.068 224.734 1.00 35.90 O
ATOM 4 OP2 A B2709 163.170 5.495 225.172 1.00 35.73 O
ATOM 5 O5' A B2709 162.075 4.528 223.199 1.00 36.03 O
ATOM 6 C5' A B2709 161.958 3.448 222.297 1.00 36.23 C
ATOM 7 C4' A B2709 161.556 3.942 220.949 1.00 36.43 C
ATOM 8 O4' A B2709 160.572 4.991 221.122 1.00 36.32 O
ATOM 9 C3' A B2709 162.658 4.624 220.151 1.00 36.61 C
ATOM 10 O3' A B2709 163.526 3.713 219.483 1.00 36.82 O
ATOM 11 C2' A B2709 161.867 5.508 219.213 1.00 36.72 C
ATOM 12 O2' A B2709 161.276 4.720 218.201 1.00 36.92 O
ATOM 13 C1' A B2709 160.756 5.993 220.133 1.00 36.48 C
ATOM 14 N9 A B2709 161.108 7.279 220.780 1.00 36.34 N
ATOM 15 C8 A B2709 161.485 7.539 222.087 1.00 36.12 C
ATOM 16 N7 A B2709 161.778 8.786 222.348 1.00 36.06 N
ATOM 17 C5 A B2709 161.588 9.407 221.132 1.00 36.26 C
ATOM 18 C6 A B2709 161.727 10.746 220.756 1.00 36.33 C
ATOM 19 N6 A B2709 162.113 11.717 221.592 1.00 36.19 N
ATOM 20 N1 A B2709 161.421 11.016 219.450 1.00 36.56 N
ATOM 21 C2 A B2709 161.010 10.042 218.626 1.00 36.70 C
ATOM 22 N3 A B2709 160.857 8.746 218.885 1.00 36.66 N
ATOM 23 C4 A B2709 161.164 8.494 220.162 1.00 36.44 C
ATOM 24 P G B2710 165.097 3.682 219.829 1.00 35.93 P
ATOM 25 OP1 G B2710 165.540 2.296 219.779 1.00 36.03 O
ATOM 26 OP2 G B2710 165.248 4.399 221.083 1.00 35.68 O
ATOM 27 O5' G B2710 165.780 4.481 218.619 1.00 36.18 O
TER
Atoms:
OP1: (159.068,-3.590,227.043)
OP2: (157.835,-3.952,224.873)
C3': (161.719,-1.612,223.786)
C1': (161.628,0.332,225.082)
C5': (159.182,-1.553,223.854)
O4': (160.528,0.361,224.206)
C8: (159.811,0.870,226.516)
O2': (163.483,-1.149,225.410)
C6: (160.967,2.197,229.472)
C5: (160.702,1.636,228.229)
C4: (161.773,1.327,227.406)
P: (158.994,-3.417,225.592)
C4': (160.442,-0.861,223.469)
C2': (162.105,-1.089,225.145)
C2: (163.209,1.995,228.866)
N1: (162.266,2.394,229.787)
N3: (163.108,1.480,227.644)
N6: (159.977,2.526,230.298)
N7: (159.485,1.369,227.655)
N9: (161.135,0.808,226.330)
O5': (159.201,-1.925,225.212)
O3': (162.711,-1.251,222.854)
OP2: (157.835,-3.952,224.873)
C3': (161.719,-1.612,223.786)
C1': (161.628,0.332,225.082)
C5': (159.182,-1.553,223.854)
O4': (160.528,0.361,224.206)
C8: (159.811,0.870,226.516)
O2': (163.483,-1.149,225.410)
C6: (160.967,2.197,229.472)
C5: (160.702,1.636,228.229)
C4: (161.773,1.327,227.406)
P: (158.994,-3.417,225.592)
C4': (160.442,-0.861,223.469)
C2': (162.105,-1.089,225.145)
C2: (163.209,1.995,228.866)
N1: (162.266,2.394,229.787)
N3: (163.108,1.480,227.644)
N6: (159.977,2.526,230.298)
N7: (159.485,1.369,227.655)
N9: (161.135,0.808,226.330)
O5': (159.201,-1.925,225.212)
O3': (162.711,-1.251,222.854)
OP1: (163.410,3.068,224.734)
OP2: (163.170,5.495,225.172)
C3': (162.658,4.624,220.151)
C1': (160.756,5.993,220.133)
C5': (161.958,3.448,222.297)
O4': (160.572,4.991,221.122)
C8: (161.485,7.539,222.087)
O2': (161.276,4.720,218.201)
C6: (161.727,10.746,220.756)
C5: (161.588,9.407,221.132)
C4: (161.164,8.494,220.162)
P: (162.607,4.302,224.665)
C4': (161.556,3.942,220.949)
C2': (161.867,5.508,219.213)
C2: (161.010,10.042,218.626)
N1: (161.421,11.016,219.450)
N3: (160.857,8.746,218.885)
N6: (162.113,11.717,221.592)
N7: (161.778,8.786,222.348)
N9: (161.108,7.279,220.780)
O5': (162.075,4.528,223.199)
O3': (163.526,3.713,219.483)
OP2: (163.170,5.495,225.172)
C3': (162.658,4.624,220.151)
C1': (160.756,5.993,220.133)
C5': (161.958,3.448,222.297)
O4': (160.572,4.991,221.122)
C8: (161.485,7.539,222.087)
O2': (161.276,4.720,218.201)
C6: (161.727,10.746,220.756)
C5: (161.588,9.407,221.132)
C4: (161.164,8.494,220.162)
P: (162.607,4.302,224.665)
C4': (161.556,3.942,220.949)
C2': (161.867,5.508,219.213)
C2: (161.010,10.042,218.626)
N1: (161.421,11.016,219.450)
N3: (160.857,8.746,218.885)
N6: (162.113,11.717,221.592)
N7: (161.778,8.786,222.348)
N9: (161.108,7.279,220.780)
O5': (162.075,4.528,223.199)
O3': (163.526,3.713,219.483)
Image (generated by PyMOL):