ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:0999:01253

Extra

PDB:
ATOM 1 O3' G A 998 43.295 94.680 67.231 1.00 27.96 O
ATOM 2 P A A 999 44.842 94.497 67.612 1.00 28.69 P
ATOM 3 OP1 A A 999 45.329 95.847 67.960 1.00 26.26 O
ATOM 4 OP2 A A 999 45.530 93.710 66.565 1.00 29.12 O
ATOM 5 O5' A A 999 44.814 93.598 68.921 1.00 27.19 O
ATOM 6 C5' A A 999 45.165 94.145 70.199 1.00 26.07 C
ATOM 7 C4' A A 999 43.936 94.693 70.878 1.00 24.59 C
ATOM 8 O4' A A 999 42.974 93.633 71.127 1.00 22.91 O
ATOM 9 C3' A A 999 44.187 95.295 72.239 1.00 23.69 C
ATOM 10 O3' A A 999 44.691 96.618 72.075 1.00 25.10 O
ATOM 11 C2' A A 999 42.799 95.219 72.863 1.00 22.20 C
ATOM 12 O2' A A 999 41.920 96.183 72.331 1.00 21.69 O
ATOM 13 C1' A A 999 42.322 93.854 72.364 1.00 21.34 C
ATOM 14 N9 A A 999 42.675 92.750 73.262 1.00 22.78 N
ATOM 15 C8 A A 999 43.538 91.710 73.005 1.00 23.05 C
ATOM 16 N7 A A 999 43.697 90.892 74.017 1.00 21.97 N
ATOM 17 C5 A A 999 42.880 91.420 75.005 1.00 20.39 C
ATOM 18 C6 A A 999 42.624 91.025 76.320 1.00 19.98 C
ATOM 19 N6 A A 999 43.182 89.961 76.893 1.00 20.57 N
ATOM 20 N1 A A 999 41.766 91.769 77.041 1.00 20.50 N
ATOM 21 C2 A A 999 41.205 92.836 76.469 1.00 21.08 C
ATOM 22 N3 A A 999 41.365 93.311 75.243 1.00 22.31 N
ATOM 23 C4 A A 999 42.231 92.553 74.551 1.00 21.76 C
ATOM 24 P U A1000 46.121 97.018 72.697 1.00 26.06 P
ATOM 25 OP1 U A1000 46.461 98.340 72.130 1.00 27.50 O
ATOM 26 OP2 U A1000 47.075 95.890 72.536 1.00 23.42 O
ATOM 27 O5' U A1000 45.810 97.219 74.245 1.00 23.63 O
TER

ATOM 1 O3' U B1252 37.615 103.432 82.233 1.00 23.45 O
ATOM 2 P A B1253 37.592 103.248 80.644 1.00 23.55 P
ATOM 3 OP1 A B1253 37.966 104.568 80.085 1.00 20.73 O
ATOM 4 OP2 A B1253 36.303 102.610 80.254 1.00 22.76 O
ATOM 5 O5' A B1253 38.781 102.231 80.361 1.00 21.71 O
ATOM 6 C5' A B1253 40.132 102.637 80.576 1.00 22.51 C
ATOM 7 C4' A B1253 41.077 101.546 80.174 1.00 21.60 C
ATOM 8 O4' A B1253 40.954 100.432 81.082 1.00 24.98 O
ATOM 9 C3' A B1253 40.847 100.944 78.809 1.00 22.49 C
ATOM 10 O3' A B1253 41.421 101.768 77.809 1.00 25.86 O
ATOM 11 C2' A B1253 41.556 99.602 78.943 1.00 25.42 C
ATOM 12 O2' A B1253 42.961 99.686 78.842 1.00 26.49 O
ATOM 13 C1' A B1253 41.213 99.223 80.385 1.00 26.55 C
ATOM 14 N9 A B1253 40.036 98.352 80.493 1.00 29.51 N
ATOM 15 C8 A B1253 38.759 98.682 80.895 1.00 29.58 C
ATOM 16 N7 A B1253 37.925 97.673 80.877 1.00 29.12 N
ATOM 17 C5 A B1253 38.698 96.607 80.435 1.00 28.64 C
ATOM 18 C6 A B1253 38.399 95.254 80.197 1.00 28.56 C
ATOM 19 N6 A B1253 37.188 94.714 80.376 1.00 28.40 N
ATOM 20 N1 A B1253 39.400 94.460 79.758 1.00 28.02 N
ATOM 21 C2 A B1253 40.606 94.993 79.569 1.00 27.76 C
ATOM 22 N3 A B1253 41.010 96.244 79.754 1.00 29.10 N
ATOM 23 C4 A B1253 39.998 97.010 80.195 1.00 28.09 C
ATOM 24 P G B1254 40.637 102.026 76.429 1.00 28.39 P
ATOM 25 OP1 G B1254 41.611 102.649 75.493 1.00 26.20 O
ATOM 26 OP2 G B1254 39.357 102.724 76.720 1.00 26.39 O
ATOM 27 O5' G B1254 40.312 100.555 75.911 1.00 27.40 O
TER

Atoms:
OP1: (45.329,95.847,67.960)
OP2: (45.530,93.710,66.565)
C3': (44.187,95.295,72.239)
C1': (42.322,93.854,72.364)
C5': (45.165,94.145,70.199)
O4': (42.974,93.633,71.127)
C8: (43.538,91.710,73.005)
O2': (41.920,96.183,72.331)
C6: (42.624,91.025,76.320)
C5: (42.880,91.420,75.005)
C4: (42.231,92.553,74.551)
P: (44.842,94.497,67.612)
C4': (43.936,94.693,70.878)
C2': (42.799,95.219,72.863)
C2: (41.205,92.836,76.469)
N1: (41.766,91.769,77.041)
N3: (41.365,93.311,75.243)
N6: (43.182,89.961,76.893)
N7: (43.697,90.892,74.017)
N9: (42.675,92.750,73.262)
O5': (44.814,93.598,68.921)
O3': (44.691,96.618,72.075)
OP1: (37.966,104.568,80.085)
OP2: (36.303,102.610,80.254)
C3': (40.847,100.944,78.809)
C1': (41.213,99.223,80.385)
C5': (40.132,102.637,80.576)
O4': (40.954,100.432,81.082)
C8: (38.759,98.682,80.895)
O2': (42.961,99.686,78.842)
C6: (38.399,95.254,80.197)
C5: (38.698,96.607,80.435)
C4: (39.998,97.010,80.195)
P: (37.592,103.248,80.644)
C4': (41.077,101.546,80.174)
C2': (41.556,99.602,78.943)
C2: (40.606,94.993,79.569)
N1: (39.400,94.460,79.758)
N3: (41.010,96.244,79.754)
N6: (37.188,94.714,80.376)
N7: (37.925,97.673,80.877)
N9: (40.036,98.352,80.493)
O5': (38.781,102.231,80.361)
O3': (41.421,101.768,77.809)
Image (generated by PyMOL):
PyMOL image
show in jmol