Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:A124:A31
Extra
PDB:
ATOM 1 O3' U A 123 47.289 62.565 19.699 1.00 33.02 O
ATOM 2 P A A 124 47.912 61.966 21.046 1.00 38.32 P
ATOM 3 OP1 A A 124 49.344 62.352 21.047 1.00 40.78 O
ATOM 4 OP2 A A 124 47.535 60.541 21.163 1.00 32.24 O
ATOM 5 O5' A A 124 47.132 62.831 22.132 1.00 31.60 O
ATOM 6 C5' A A 124 45.735 62.728 22.336 1.00 30.27 C
ATOM 7 C4' A A 124 45.360 63.558 23.536 1.00 27.74 C
ATOM 8 O4' A A 124 45.361 64.974 23.208 1.00 27.26 O
ATOM 9 C3' A A 124 43.986 63.294 24.111 1.00 27.29 C
ATOM 10 O3' A A 124 44.005 62.164 24.964 1.00 29.27 O
ATOM 11 C2' A A 124 43.657 64.597 24.831 1.00 26.55 C
ATOM 12 O2' A A 124 44.278 64.620 26.102 1.00 29.96 O
ATOM 13 C1' A A 124 44.354 65.629 23.944 1.00 26.03 C
ATOM 14 N9 A A 124 43.427 66.245 22.983 1.00 24.66 N
ATOM 15 C8 A A 124 43.366 66.055 21.624 1.00 26.33 C
ATOM 16 N7 A A 124 42.431 66.766 21.046 1.00 23.79 N
ATOM 17 C5 A A 124 41.846 67.465 22.091 1.00 21.88 C
ATOM 18 C6 A A 124 40.796 68.386 22.145 1.00 23.38 C
ATOM 19 N6 A A 124 40.105 68.804 21.081 1.00 23.63 N
ATOM 20 N1 A A 124 40.482 68.890 23.359 1.00 23.17 N
ATOM 21 C2 A A 124 41.165 68.478 24.431 1.00 24.82 C
ATOM 22 N3 A A 124 42.174 67.620 24.514 1.00 23.90 N
ATOM 23 C4 A A 124 42.457 67.148 23.291 1.00 25.86 C
ATOM 24 P U A 125 42.765 61.147 24.863 1.00 34.08 P
ATOM 25 OP1 U A 125 43.044 60.125 25.901 1.00 34.59 O
ATOM 26 OP2 U A 125 42.605 60.749 23.438 1.00 30.99 O
ATOM 27 O5' U A 125 41.543 62.050 25.288 1.00 29.11 O
TER
ATOM 1 O3' G B 30 39.492 67.134 9.659 1.00 40.73 O
ATOM 2 P A B 31 40.668 68.080 9.118 1.00 45.03 P
ATOM 3 OP1 A B 31 40.041 68.641 7.896 1.00 44.59 O
ATOM 4 OP2 A B 31 42.003 67.407 9.079 1.00 34.35 O
ATOM 5 O5' A B 31 40.712 69.197 10.249 1.00 37.36 O
ATOM 6 C5' A B 31 39.631 70.084 10.500 1.00 36.92 C
ATOM 7 C4' A B 31 40.014 71.007 11.624 1.00 40.81 C
ATOM 8 O4' A B 31 40.062 70.235 12.860 1.00 36.12 O
ATOM 9 C3' A B 31 41.394 71.656 11.461 1.00 39.59 C
ATOM 10 O3' A B 31 41.379 72.978 12.000 1.00 49.58 O
ATOM 11 C2' A B 31 42.279 70.767 12.331 1.00 37.10 C
ATOM 12 O2' A B 31 43.466 71.364 12.816 1.00 31.73 O
ATOM 13 C1' A B 31 41.315 70.472 13.472 1.00 36.00 C
ATOM 14 N9 A B 31 41.731 69.383 14.361 1.00 28.69 N
ATOM 15 C8 A B 31 42.505 68.281 14.098 1.00 28.66 C
ATOM 16 N7 A B 31 42.703 67.531 15.156 1.00 27.20 N
ATOM 17 C5 A B 31 42.030 68.202 16.171 1.00 27.26 C
ATOM 18 C6 A B 31 41.861 67.947 17.540 1.00 24.90 C
ATOM 19 N6 A B 31 42.372 66.887 18.156 1.00 24.22 N
ATOM 20 N1 A B 31 41.130 68.820 18.264 1.00 23.60 N
ATOM 21 C2 A B 31 40.621 69.894 17.660 1.00 25.76 C
ATOM 22 N3 A B 31 40.719 70.247 16.388 1.00 28.80 N
ATOM 23 C4 A B 31 41.446 69.352 15.699 1.00 28.76 C
ATOM 24 P U B 32 41.087 74.281 11.089 1.00 57.43 P
ATOM 25 OP1 U B 32 41.119 73.870 9.665 1.00 52.06 O
ATOM 26 OP2 U B 32 42.031 75.309 11.585 1.00 59.94 O
ATOM 27 O5' U B 32 39.599 74.669 11.491 1.00 56.37 O
TER
ATOM 2 P A A 124 47.912 61.966 21.046 1.00 38.32 P
ATOM 3 OP1 A A 124 49.344 62.352 21.047 1.00 40.78 O
ATOM 4 OP2 A A 124 47.535 60.541 21.163 1.00 32.24 O
ATOM 5 O5' A A 124 47.132 62.831 22.132 1.00 31.60 O
ATOM 6 C5' A A 124 45.735 62.728 22.336 1.00 30.27 C
ATOM 7 C4' A A 124 45.360 63.558 23.536 1.00 27.74 C
ATOM 8 O4' A A 124 45.361 64.974 23.208 1.00 27.26 O
ATOM 9 C3' A A 124 43.986 63.294 24.111 1.00 27.29 C
ATOM 10 O3' A A 124 44.005 62.164 24.964 1.00 29.27 O
ATOM 11 C2' A A 124 43.657 64.597 24.831 1.00 26.55 C
ATOM 12 O2' A A 124 44.278 64.620 26.102 1.00 29.96 O
ATOM 13 C1' A A 124 44.354 65.629 23.944 1.00 26.03 C
ATOM 14 N9 A A 124 43.427 66.245 22.983 1.00 24.66 N
ATOM 15 C8 A A 124 43.366 66.055 21.624 1.00 26.33 C
ATOM 16 N7 A A 124 42.431 66.766 21.046 1.00 23.79 N
ATOM 17 C5 A A 124 41.846 67.465 22.091 1.00 21.88 C
ATOM 18 C6 A A 124 40.796 68.386 22.145 1.00 23.38 C
ATOM 19 N6 A A 124 40.105 68.804 21.081 1.00 23.63 N
ATOM 20 N1 A A 124 40.482 68.890 23.359 1.00 23.17 N
ATOM 21 C2 A A 124 41.165 68.478 24.431 1.00 24.82 C
ATOM 22 N3 A A 124 42.174 67.620 24.514 1.00 23.90 N
ATOM 23 C4 A A 124 42.457 67.148 23.291 1.00 25.86 C
ATOM 24 P U A 125 42.765 61.147 24.863 1.00 34.08 P
ATOM 25 OP1 U A 125 43.044 60.125 25.901 1.00 34.59 O
ATOM 26 OP2 U A 125 42.605 60.749 23.438 1.00 30.99 O
ATOM 27 O5' U A 125 41.543 62.050 25.288 1.00 29.11 O
TER
ATOM 1 O3' G B 30 39.492 67.134 9.659 1.00 40.73 O
ATOM 2 P A B 31 40.668 68.080 9.118 1.00 45.03 P
ATOM 3 OP1 A B 31 40.041 68.641 7.896 1.00 44.59 O
ATOM 4 OP2 A B 31 42.003 67.407 9.079 1.00 34.35 O
ATOM 5 O5' A B 31 40.712 69.197 10.249 1.00 37.36 O
ATOM 6 C5' A B 31 39.631 70.084 10.500 1.00 36.92 C
ATOM 7 C4' A B 31 40.014 71.007 11.624 1.00 40.81 C
ATOM 8 O4' A B 31 40.062 70.235 12.860 1.00 36.12 O
ATOM 9 C3' A B 31 41.394 71.656 11.461 1.00 39.59 C
ATOM 10 O3' A B 31 41.379 72.978 12.000 1.00 49.58 O
ATOM 11 C2' A B 31 42.279 70.767 12.331 1.00 37.10 C
ATOM 12 O2' A B 31 43.466 71.364 12.816 1.00 31.73 O
ATOM 13 C1' A B 31 41.315 70.472 13.472 1.00 36.00 C
ATOM 14 N9 A B 31 41.731 69.383 14.361 1.00 28.69 N
ATOM 15 C8 A B 31 42.505 68.281 14.098 1.00 28.66 C
ATOM 16 N7 A B 31 42.703 67.531 15.156 1.00 27.20 N
ATOM 17 C5 A B 31 42.030 68.202 16.171 1.00 27.26 C
ATOM 18 C6 A B 31 41.861 67.947 17.540 1.00 24.90 C
ATOM 19 N6 A B 31 42.372 66.887 18.156 1.00 24.22 N
ATOM 20 N1 A B 31 41.130 68.820 18.264 1.00 23.60 N
ATOM 21 C2 A B 31 40.621 69.894 17.660 1.00 25.76 C
ATOM 22 N3 A B 31 40.719 70.247 16.388 1.00 28.80 N
ATOM 23 C4 A B 31 41.446 69.352 15.699 1.00 28.76 C
ATOM 24 P U B 32 41.087 74.281 11.089 1.00 57.43 P
ATOM 25 OP1 U B 32 41.119 73.870 9.665 1.00 52.06 O
ATOM 26 OP2 U B 32 42.031 75.309 11.585 1.00 59.94 O
ATOM 27 O5' U B 32 39.599 74.669 11.491 1.00 56.37 O
TER
Atoms:
OP1: (49.344,62.352,21.047)
OP2: (47.535,60.541,21.163)
C3': (43.986,63.294,24.111)
C1': (44.354,65.629,23.944)
C5': (45.735,62.728,22.336)
O4': (45.361,64.974,23.208)
C8: (43.366,66.055,21.624)
O2': (44.278,64.620,26.102)
C6: (40.796,68.386,22.145)
C5: (41.846,67.465,22.091)
C4: (42.457,67.148,23.291)
P: (47.912,61.966,21.046)
C4': (45.360,63.558,23.536)
C2': (43.657,64.597,24.831)
C2: (41.165,68.478,24.431)
N1: (40.482,68.890,23.359)
N3: (42.174,67.620,24.514)
N6: (40.105,68.804,21.081)
N7: (42.431,66.766,21.046)
N9: (43.427,66.245,22.983)
O5': (47.132,62.831,22.132)
O3': (44.005,62.164,24.964)
OP2: (47.535,60.541,21.163)
C3': (43.986,63.294,24.111)
C1': (44.354,65.629,23.944)
C5': (45.735,62.728,22.336)
O4': (45.361,64.974,23.208)
C8: (43.366,66.055,21.624)
O2': (44.278,64.620,26.102)
C6: (40.796,68.386,22.145)
C5: (41.846,67.465,22.091)
C4: (42.457,67.148,23.291)
P: (47.912,61.966,21.046)
C4': (45.360,63.558,23.536)
C2': (43.657,64.597,24.831)
C2: (41.165,68.478,24.431)
N1: (40.482,68.890,23.359)
N3: (42.174,67.620,24.514)
N6: (40.105,68.804,21.081)
N7: (42.431,66.766,21.046)
N9: (43.427,66.245,22.983)
O5': (47.132,62.831,22.132)
O3': (44.005,62.164,24.964)
OP1: (40.041,68.641,7.896)
OP2: (42.003,67.407,9.079)
C3': (41.394,71.656,11.461)
C1': (41.315,70.472,13.472)
C5': (39.631,70.084,10.500)
O4': (40.062,70.235,12.860)
C8: (42.505,68.281,14.098)
O2': (43.466,71.364,12.816)
C6: (41.861,67.947,17.540)
C5: (42.030,68.202,16.171)
C4: (41.446,69.352,15.699)
P: (40.668,68.080,9.118)
C4': (40.014,71.007,11.624)
C2': (42.279,70.767,12.331)
C2: (40.621,69.894,17.660)
N1: (41.130,68.820,18.264)
N3: (40.719,70.247,16.388)
N6: (42.372,66.887,18.156)
N7: (42.703,67.531,15.156)
N9: (41.731,69.383,14.361)
O5': (40.712,69.197,10.249)
O3': (41.379,72.978,12.000)
OP2: (42.003,67.407,9.079)
C3': (41.394,71.656,11.461)
C1': (41.315,70.472,13.472)
C5': (39.631,70.084,10.500)
O4': (40.062,70.235,12.860)
C8: (42.505,68.281,14.098)
O2': (43.466,71.364,12.816)
C6: (41.861,67.947,17.540)
C5: (42.030,68.202,16.171)
C4: (41.446,69.352,15.699)
P: (40.668,68.080,9.118)
C4': (40.014,71.007,11.624)
C2': (42.279,70.767,12.331)
C2: (40.621,69.894,17.660)
N1: (41.130,68.820,18.264)
N3: (40.719,70.247,16.388)
N6: (42.372,66.887,18.156)
N7: (42.703,67.531,15.156)
N9: (41.731,69.383,14.361)
O5': (40.712,69.197,10.249)
O3': (41.379,72.978,12.000)
Image (generated by PyMOL):