Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A453:A448
Extra
PDB:
ATOM 1 O3' A A 452 -45.356 -79.104 39.775 1.00 0.01 O
ATOM 2 P A A 453 -45.884 -80.494 40.319 1.00 0.01 P
ATOM 3 OP1 A A 453 -46.276 -81.292 39.155 1.00 0.01 O
ATOM 4 OP2 A A 453 -46.874 -80.193 41.335 1.00 0.01 O
ATOM 5 O5' A A 453 -44.619 -81.115 40.988 1.00 0.01 O
ATOM 6 C5' A A 453 -44.265 -80.758 42.295 1.00 0.01 C
ATOM 7 C4' A A 453 -43.711 -81.932 43.007 1.00 0.01 C
ATOM 8 O4' A A 453 -44.804 -82.794 43.430 1.00 0.01 O
ATOM 9 C3' A A 453 -42.824 -82.798 42.144 1.00 0.01 C
ATOM 10 O3' A A 453 -41.829 -83.417 42.953 1.00 0.01 O
ATOM 11 C2' A A 453 -43.801 -83.850 41.634 1.00 0.01 C
ATOM 12 O2' A A 453 -43.209 -85.048 41.213 1.00 0.01 O
ATOM 13 C1' A A 453 -44.639 -84.070 42.856 1.00 0.01 C
ATOM 14 N9 A A 453 -45.945 -84.628 42.579 1.00 0.01 N
ATOM 15 C8 A A 453 -46.880 -84.169 41.699 1.00 0.01 C
ATOM 16 N7 A A 453 -47.974 -84.882 41.693 1.00 0.01 N
ATOM 17 C5 A A 453 -47.706 -85.865 42.627 1.00 0.01 C
ATOM 18 C6 A A 453 -48.472 -86.925 43.095 1.00 0.01 C
ATOM 19 N6 A A 453 -49.690 -87.113 42.605 1.00 0.01 N
ATOM 20 N1 A A 453 -47.974 -87.750 44.049 1.00 0.01 N
ATOM 21 C2 A A 453 -46.751 -87.496 44.497 1.00 0.01 C
ATOM 22 N3 A A 453 -45.930 -86.523 44.134 1.00 0.01 N
ATOM 23 C4 A A 453 -46.467 -85.735 43.185 1.00 0.01 C
ATOM 24 P C A 454 -40.663 -82.548 43.628 1.00 0.13 P
ATOM 25 OP1 C A 454 -39.982 -83.448 44.593 1.00 0.13 O
ATOM 26 OP2 C A 454 -41.253 -81.278 44.121 1.00 0.13 O
ATOM 27 O5' C A 454 -39.708 -82.258 42.403 1.00 0.13 O
TER
ATOM 1 O3' U B 447 -55.698 -81.382 34.257 1.00 0.01 O
ATOM 2 P A B 448 -55.783 -80.719 35.698 1.00 0.01 P
ATOM 3 OP1 A B 448 -56.930 -79.823 35.673 1.00 0.01 O
ATOM 4 OP2 A B 448 -54.473 -80.177 35.994 1.00 0.01 O
ATOM 5 O5' A B 448 -56.066 -81.943 36.661 1.00 0.01 O
ATOM 6 C5' A B 448 -57.379 -82.426 36.849 1.00 0.01 C
ATOM 7 C4' A B 448 -57.455 -83.421 37.970 1.00 0.01 C
ATOM 8 O4' A B 448 -56.436 -84.422 37.805 1.00 0.01 O
ATOM 9 C3' A B 448 -57.211 -82.872 39.344 1.00 0.01 C
ATOM 10 O3' A B 448 -58.359 -82.254 39.901 1.00 0.01 O
ATOM 11 C2' A B 448 -56.742 -84.098 40.101 1.00 0.01 C
ATOM 12 O2' A B 448 -57.832 -84.914 40.430 1.00 0.01 O
ATOM 13 C1' A B 448 -55.927 -84.809 39.042 1.00 0.01 C
ATOM 14 N9 A B 448 -54.509 -84.427 39.080 1.00 0.01 N
ATOM 15 C8 A B 448 -53.891 -83.619 38.171 1.00 0.01 C
ATOM 16 N7 A B 448 -52.623 -83.413 38.394 1.00 0.01 N
ATOM 17 C5 A B 448 -52.390 -84.138 39.526 1.00 0.01 C
ATOM 18 C6 A B 448 -51.228 -84.321 40.264 1.00 0.01 C
ATOM 19 N6 A B 448 -50.070 -83.742 39.927 1.00 0.01 N
ATOM 20 N1 A B 448 -51.287 -85.108 41.362 1.00 0.01 N
ATOM 21 C2 A B 448 -52.454 -85.656 41.667 1.00 0.01 C
ATOM 22 N3 A B 448 -53.610 -85.544 41.037 1.00 0.01 N
ATOM 23 C4 A B 448 -53.521 -84.769 39.963 1.00 0.01 C
ATOM 24 P G B 449 -58.212 -80.882 40.702 1.00 0.01 P
ATOM 25 OP1 G B 449 -59.485 -80.627 41.381 1.00 0.01 O
ATOM 26 OP2 G B 449 -57.703 -79.899 39.771 1.00 0.01 O
ATOM 27 O5' G B 449 -57.107 -81.220 41.761 1.00 0.01 O
TER
ATOM 2 P A A 453 -45.884 -80.494 40.319 1.00 0.01 P
ATOM 3 OP1 A A 453 -46.276 -81.292 39.155 1.00 0.01 O
ATOM 4 OP2 A A 453 -46.874 -80.193 41.335 1.00 0.01 O
ATOM 5 O5' A A 453 -44.619 -81.115 40.988 1.00 0.01 O
ATOM 6 C5' A A 453 -44.265 -80.758 42.295 1.00 0.01 C
ATOM 7 C4' A A 453 -43.711 -81.932 43.007 1.00 0.01 C
ATOM 8 O4' A A 453 -44.804 -82.794 43.430 1.00 0.01 O
ATOM 9 C3' A A 453 -42.824 -82.798 42.144 1.00 0.01 C
ATOM 10 O3' A A 453 -41.829 -83.417 42.953 1.00 0.01 O
ATOM 11 C2' A A 453 -43.801 -83.850 41.634 1.00 0.01 C
ATOM 12 O2' A A 453 -43.209 -85.048 41.213 1.00 0.01 O
ATOM 13 C1' A A 453 -44.639 -84.070 42.856 1.00 0.01 C
ATOM 14 N9 A A 453 -45.945 -84.628 42.579 1.00 0.01 N
ATOM 15 C8 A A 453 -46.880 -84.169 41.699 1.00 0.01 C
ATOM 16 N7 A A 453 -47.974 -84.882 41.693 1.00 0.01 N
ATOM 17 C5 A A 453 -47.706 -85.865 42.627 1.00 0.01 C
ATOM 18 C6 A A 453 -48.472 -86.925 43.095 1.00 0.01 C
ATOM 19 N6 A A 453 -49.690 -87.113 42.605 1.00 0.01 N
ATOM 20 N1 A A 453 -47.974 -87.750 44.049 1.00 0.01 N
ATOM 21 C2 A A 453 -46.751 -87.496 44.497 1.00 0.01 C
ATOM 22 N3 A A 453 -45.930 -86.523 44.134 1.00 0.01 N
ATOM 23 C4 A A 453 -46.467 -85.735 43.185 1.00 0.01 C
ATOM 24 P C A 454 -40.663 -82.548 43.628 1.00 0.13 P
ATOM 25 OP1 C A 454 -39.982 -83.448 44.593 1.00 0.13 O
ATOM 26 OP2 C A 454 -41.253 -81.278 44.121 1.00 0.13 O
ATOM 27 O5' C A 454 -39.708 -82.258 42.403 1.00 0.13 O
TER
ATOM 1 O3' U B 447 -55.698 -81.382 34.257 1.00 0.01 O
ATOM 2 P A B 448 -55.783 -80.719 35.698 1.00 0.01 P
ATOM 3 OP1 A B 448 -56.930 -79.823 35.673 1.00 0.01 O
ATOM 4 OP2 A B 448 -54.473 -80.177 35.994 1.00 0.01 O
ATOM 5 O5' A B 448 -56.066 -81.943 36.661 1.00 0.01 O
ATOM 6 C5' A B 448 -57.379 -82.426 36.849 1.00 0.01 C
ATOM 7 C4' A B 448 -57.455 -83.421 37.970 1.00 0.01 C
ATOM 8 O4' A B 448 -56.436 -84.422 37.805 1.00 0.01 O
ATOM 9 C3' A B 448 -57.211 -82.872 39.344 1.00 0.01 C
ATOM 10 O3' A B 448 -58.359 -82.254 39.901 1.00 0.01 O
ATOM 11 C2' A B 448 -56.742 -84.098 40.101 1.00 0.01 C
ATOM 12 O2' A B 448 -57.832 -84.914 40.430 1.00 0.01 O
ATOM 13 C1' A B 448 -55.927 -84.809 39.042 1.00 0.01 C
ATOM 14 N9 A B 448 -54.509 -84.427 39.080 1.00 0.01 N
ATOM 15 C8 A B 448 -53.891 -83.619 38.171 1.00 0.01 C
ATOM 16 N7 A B 448 -52.623 -83.413 38.394 1.00 0.01 N
ATOM 17 C5 A B 448 -52.390 -84.138 39.526 1.00 0.01 C
ATOM 18 C6 A B 448 -51.228 -84.321 40.264 1.00 0.01 C
ATOM 19 N6 A B 448 -50.070 -83.742 39.927 1.00 0.01 N
ATOM 20 N1 A B 448 -51.287 -85.108 41.362 1.00 0.01 N
ATOM 21 C2 A B 448 -52.454 -85.656 41.667 1.00 0.01 C
ATOM 22 N3 A B 448 -53.610 -85.544 41.037 1.00 0.01 N
ATOM 23 C4 A B 448 -53.521 -84.769 39.963 1.00 0.01 C
ATOM 24 P G B 449 -58.212 -80.882 40.702 1.00 0.01 P
ATOM 25 OP1 G B 449 -59.485 -80.627 41.381 1.00 0.01 O
ATOM 26 OP2 G B 449 -57.703 -79.899 39.771 1.00 0.01 O
ATOM 27 O5' G B 449 -57.107 -81.220 41.761 1.00 0.01 O
TER
Atoms:
OP1: (-46.276,-81.292,39.155)
OP2: (-46.874,-80.193,41.335)
C3': (-42.824,-82.798,42.144)
C1': (-44.639,-84.070,42.856)
C5': (-44.265,-80.758,42.295)
O4': (-44.804,-82.794,43.430)
C8: (-46.880,-84.169,41.699)
O2': (-43.209,-85.048,41.213)
C6: (-48.472,-86.925,43.095)
C5: (-47.706,-85.865,42.627)
C4: (-46.467,-85.735,43.185)
P: (-45.884,-80.494,40.319)
C4': (-43.711,-81.932,43.007)
C2': (-43.801,-83.850,41.634)
C2: (-46.751,-87.496,44.497)
N1: (-47.974,-87.750,44.049)
N3: (-45.930,-86.523,44.134)
N6: (-49.690,-87.113,42.605)
N7: (-47.974,-84.882,41.693)
N9: (-45.945,-84.628,42.579)
O5': (-44.619,-81.115,40.988)
O3': (-41.829,-83.417,42.953)
OP2: (-46.874,-80.193,41.335)
C3': (-42.824,-82.798,42.144)
C1': (-44.639,-84.070,42.856)
C5': (-44.265,-80.758,42.295)
O4': (-44.804,-82.794,43.430)
C8: (-46.880,-84.169,41.699)
O2': (-43.209,-85.048,41.213)
C6: (-48.472,-86.925,43.095)
C5: (-47.706,-85.865,42.627)
C4: (-46.467,-85.735,43.185)
P: (-45.884,-80.494,40.319)
C4': (-43.711,-81.932,43.007)
C2': (-43.801,-83.850,41.634)
C2: (-46.751,-87.496,44.497)
N1: (-47.974,-87.750,44.049)
N3: (-45.930,-86.523,44.134)
N6: (-49.690,-87.113,42.605)
N7: (-47.974,-84.882,41.693)
N9: (-45.945,-84.628,42.579)
O5': (-44.619,-81.115,40.988)
O3': (-41.829,-83.417,42.953)
OP1: (-56.930,-79.823,35.673)
OP2: (-54.473,-80.177,35.994)
C3': (-57.211,-82.872,39.344)
C1': (-55.927,-84.809,39.042)
C5': (-57.379,-82.426,36.849)
O4': (-56.436,-84.422,37.805)
C8: (-53.891,-83.619,38.171)
O2': (-57.832,-84.914,40.430)
C6: (-51.228,-84.321,40.264)
C5: (-52.390,-84.138,39.526)
C4: (-53.521,-84.769,39.963)
P: (-55.783,-80.719,35.698)
C4': (-57.455,-83.421,37.970)
C2': (-56.742,-84.098,40.101)
C2: (-52.454,-85.656,41.667)
N1: (-51.287,-85.108,41.362)
N3: (-53.610,-85.544,41.037)
N6: (-50.070,-83.742,39.927)
N7: (-52.623,-83.413,38.394)
N9: (-54.509,-84.427,39.080)
O5': (-56.066,-81.943,36.661)
O3': (-58.359,-82.254,39.901)
OP2: (-54.473,-80.177,35.994)
C3': (-57.211,-82.872,39.344)
C1': (-55.927,-84.809,39.042)
C5': (-57.379,-82.426,36.849)
O4': (-56.436,-84.422,37.805)
C8: (-53.891,-83.619,38.171)
O2': (-57.832,-84.914,40.430)
C6: (-51.228,-84.321,40.264)
C5: (-52.390,-84.138,39.526)
C4: (-53.521,-84.769,39.963)
P: (-55.783,-80.719,35.698)
C4': (-57.455,-83.421,37.970)
C2': (-56.742,-84.098,40.101)
C2: (-52.454,-85.656,41.667)
N1: (-51.287,-85.108,41.362)
N3: (-53.610,-85.544,41.037)
N6: (-50.070,-83.742,39.927)
N7: (-52.623,-83.413,38.394)
N9: (-54.509,-84.427,39.080)
O5': (-56.066,-81.943,36.661)
O3': (-58.359,-82.254,39.901)
Image (generated by PyMOL):