ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:02041:02453

Extra

PDB:
ATOM 1 O3' G A2040 52.317 127.779 105.932 1.00 32.51 O
ATOM 2 P A A2041 52.818 127.655 104.406 1.00 32.40 P
ATOM 3 OP1 A A2041 53.197 126.246 104.170 1.00 31.69 O
ATOM 4 OP2 A A2041 53.811 128.725 104.154 1.00 34.14 O
ATOM 5 O5' A A2041 51.512 127.960 103.552 1.00 29.83 O
ATOM 6 C5' A A2041 50.354 127.127 103.680 1.00 28.83 C
ATOM 7 C4' A A2041 49.194 127.703 102.910 1.00 30.16 C
ATOM 8 O4' A A2041 48.967 129.067 103.338 1.00 31.76 O
ATOM 9 C3' A A2041 49.344 127.831 101.402 1.00 30.79 C
ATOM 10 O3' A A2041 49.053 126.601 100.756 1.00 32.45 O
ATOM 11 C2' A A2041 48.270 128.855 101.072 1.00 30.97 C
ATOM 12 O2' A A2041 46.978 128.272 101.073 1.00 30.11 O
ATOM 13 C1' A A2041 48.372 129.798 102.275 1.00 32.34 C
ATOM 14 N9 A A2041 49.146 131.021 102.036 1.00 32.08 N
ATOM 15 C8 A A2041 50.436 131.299 102.414 1.00 33.23 C
ATOM 16 N7 A A2041 50.846 132.494 102.061 1.00 32.98 N
ATOM 17 C5 A A2041 49.755 133.038 101.405 1.00 32.00 C
ATOM 18 C6 A A2041 49.553 134.277 100.790 1.00 32.30 C
ATOM 19 N6 A A2041 50.482 135.235 100.738 1.00 31.85 N
ATOM 20 N1 A A2041 48.348 134.506 100.221 1.00 31.80 N
ATOM 21 C2 A A2041 47.420 133.544 100.275 1.00 29.47 C
ATOM 22 N3 A A2041 47.492 132.340 100.825 1.00 30.34 N
ATOM 23 C4 A A2041 48.701 132.143 101.380 1.00 31.95 C
ATOM 24 P A A2042 49.835 126.192 99.418 1.00 33.23 P
ATOM 25 OP1 A A2042 49.948 127.391 98.549 1.00 35.15 O
ATOM 26 OP2 A A2042 49.163 124.983 98.902 1.00 34.21 O
ATOM 27 O5' A A2042 51.289 125.784 99.929 1.00 29.87 O
TER

ATOM 1 O3' G B2452 62.937 134.300 104.829 1.00 28.55 O
ATOM 2 P A B2453 61.455 133.822 104.444 1.00 28.33 P
ATOM 3 OP1 A B2453 60.748 133.461 105.689 1.00 25.01 O
ATOM 4 OP2 A B2453 61.559 132.834 103.356 1.00 31.61 O
ATOM 5 O5' A B2453 60.791 135.143 103.847 1.00 30.90 O
ATOM 6 C5' A B2453 61.505 135.981 102.908 1.00 28.41 C
ATOM 7 C4' A B2453 60.536 136.763 102.042 1.00 29.77 C
ATOM 8 O4' A B2453 59.633 135.843 101.371 1.00 31.40 O
ATOM 9 C3' A B2453 59.582 137.709 102.749 1.00 30.05 C
ATOM 10 O3' A B2453 60.176 138.947 103.078 1.00 33.02 O
ATOM 11 C2' A B2453 58.494 137.892 101.711 1.00 30.85 C
ATOM 12 O2' A B2453 58.912 138.747 100.666 1.00 31.54 O
ATOM 13 C1' A B2453 58.368 136.469 101.177 1.00 31.47 C
ATOM 14 N9 A B2453 57.344 135.698 101.886 1.00 30.64 N
ATOM 15 C8 A B2453 57.519 134.857 102.952 1.00 32.52 C
ATOM 16 N7 A B2453 56.417 134.290 103.365 1.00 32.37 N
ATOM 17 C5 A B2453 55.445 134.794 102.517 1.00 31.62 C
ATOM 18 C6 A B2453 54.058 134.567 102.428 1.00 32.17 C
ATOM 19 N6 A B2453 53.393 133.724 103.227 1.00 30.15 N
ATOM 20 N1 A B2453 53.373 135.234 101.476 1.00 31.75 N
ATOM 21 C2 A B2453 54.046 136.058 100.665 1.00 33.33 C
ATOM 22 N3 A B2453 55.349 136.343 100.642 1.00 33.49 N
ATOM 23 C4 A B2453 55.999 135.670 101.606 1.00 30.95 C
ATOM 24 P G B2454 60.306 139.351 104.617 1.00 34.41 P
ATOM 25 OP1 G B2454 58.924 139.442 105.151 1.00 33.40 O
ATOM 26 OP2 G B2454 61.204 140.519 104.721 1.00 32.46 O
ATOM 27 O5' G B2454 61.055 138.068 105.194 1.00 33.13 O
TER

Atoms:
OP1: (53.197,126.246,104.170)
OP2: (53.811,128.725,104.154)
C3': (49.344,127.831,101.402)
C1': (48.372,129.798,102.275)
C5': (50.354,127.127,103.680)
O4': (48.967,129.067,103.338)
C8: (50.436,131.299,102.414)
O2': (46.978,128.272,101.073)
C6: (49.553,134.277,100.790)
C5: (49.755,133.038,101.405)
C4: (48.701,132.143,101.380)
P: (52.818,127.655,104.406)
C4': (49.194,127.703,102.910)
C2': (48.270,128.855,101.072)
C2: (47.420,133.544,100.275)
N1: (48.348,134.506,100.221)
N3: (47.492,132.340,100.825)
N6: (50.482,135.235,100.738)
N7: (50.846,132.494,102.061)
N9: (49.146,131.021,102.036)
O5': (51.512,127.960,103.552)
O3': (49.053,126.601,100.756)
OP1: (60.748,133.461,105.689)
OP2: (61.559,132.834,103.356)
C3': (59.582,137.709,102.749)
C1': (58.368,136.469,101.177)
C5': (61.505,135.981,102.908)
O4': (59.633,135.843,101.371)
C8: (57.519,134.857,102.952)
O2': (58.912,138.747,100.666)
C6: (54.058,134.567,102.428)
C5: (55.445,134.794,102.517)
C4: (55.999,135.670,101.606)
P: (61.455,133.822,104.444)
C4': (60.536,136.763,102.042)
C2': (58.494,137.892,101.711)
C2: (54.046,136.058,100.665)
N1: (53.373,135.234,101.476)
N3: (55.349,136.343,100.642)
N6: (53.393,133.724,103.227)
N7: (56.417,134.290,103.365)
N9: (57.344,135.698,101.886)
O5': (60.791,135.143,103.847)
O3': (60.176,138.947,103.078)
Image (generated by PyMOL):
PyMOL image
show in jmol