Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01189:01190
Extra
PDB:
ATOM 1 O3' C A1188 55.660 103.212 137.717 1.00 41.09 O
ATOM 2 P A A1189 56.025 103.948 136.339 1.00 44.72 P
ATOM 3 OP1 A A1189 55.972 102.951 135.240 1.00 44.96 O
ATOM 4 OP2 A A1189 57.281 104.693 136.590 1.00 44.80 O
ATOM 5 O5' A A1189 54.862 105.014 136.118 1.00 43.36 O
ATOM 6 C5' A A1189 55.099 106.203 135.341 1.00 43.39 C
ATOM 7 C4' A A1189 53.803 106.730 134.768 1.00 44.58 C
ATOM 8 O4' A A1189 53.227 105.719 133.901 1.00 46.10 O
ATOM 9 C3' A A1189 52.712 107.102 135.766 1.00 44.72 C
ATOM 10 O3' A A1189 51.948 108.186 135.239 1.00 42.72 O
ATOM 11 C2' A A1189 51.878 105.823 135.834 1.00 46.18 C
ATOM 12 O2' A A1189 50.534 106.053 136.210 1.00 45.68 O
ATOM 13 C1' A A1189 51.958 105.328 134.390 1.00 47.06 C
ATOM 14 N9 A A1189 51.862 103.876 134.241 1.00 47.52 N
ATOM 15 C8 A A1189 52.850 102.959 134.492 1.00 48.91 C
ATOM 16 N7 A A1189 52.513 101.727 134.205 1.00 50.79 N
ATOM 17 C5 A A1189 51.209 101.835 133.748 1.00 48.39 C
ATOM 18 C6 A A1189 50.295 100.879 133.268 1.00 47.98 C
ATOM 19 N6 A A1189 50.563 99.575 133.167 1.00 46.27 N
ATOM 20 N1 A A1189 49.079 101.316 132.888 1.00 48.47 N
ATOM 21 C2 A A1189 48.810 102.626 132.987 1.00 49.60 C
ATOM 22 N3 A A1189 49.588 103.619 133.417 1.00 48.37 N
ATOM 23 C4 A A1189 50.788 103.151 133.785 1.00 47.66 C
ATOM 24 P A A1190 52.421 109.698 135.510 1.00 43.11 P
ATOM 25 OP1 A A1190 52.861 109.815 136.916 1.00 44.75 O
ATOM 26 OP2 A A1190 51.366 110.605 135.002 1.00 42.06 O
ATOM 27 O5' A A1190 53.723 109.865 134.604 1.00 43.39 O
TER
ATOM 1 O3' A B1189 51.948 108.186 135.239 1.00 42.72 O
ATOM 2 P A B1190 52.421 109.698 135.510 1.00 43.11 P
ATOM 3 OP1 A B1190 52.861 109.815 136.916 1.00 44.75 O
ATOM 4 OP2 A B1190 51.366 110.605 135.002 1.00 42.06 O
ATOM 5 O5' A B1190 53.723 109.865 134.604 1.00 43.39 O
ATOM 6 C5' A B1190 53.623 110.165 133.193 1.00 42.80 C
ATOM 7 C4' A B1190 54.649 111.202 132.815 1.00 42.01 C
ATOM 8 O4' A B1190 55.972 110.635 132.943 1.00 42.18 O
ATOM 9 C3' A B1190 54.633 111.675 131.375 1.00 42.25 C
ATOM 10 O3' A B1190 53.603 112.649 131.189 1.00 42.64 O
ATOM 11 C2' A B1190 56.029 112.280 131.230 1.00 42.34 C
ATOM 12 O2' A B1190 56.145 113.577 131.775 1.00 43.19 O
ATOM 13 C1' A B1190 56.861 111.343 132.105 1.00 42.57 C
ATOM 14 N9 A B1190 57.691 110.383 131.383 1.00 44.14 N
ATOM 15 C8 A B1190 57.391 109.648 130.264 1.00 44.81 C
ATOM 16 N7 A B1190 58.376 108.889 129.852 1.00 44.83 N
ATOM 17 C5 A B1190 59.390 109.136 130.765 1.00 45.36 C
ATOM 18 C6 A B1190 60.700 108.641 130.884 1.00 45.13 C
ATOM 19 N6 A B1190 61.238 107.753 130.048 1.00 43.22 N
ATOM 20 N1 A B1190 61.450 109.095 131.909 1.00 45.66 N
ATOM 21 C2 A B1190 60.914 109.978 132.754 1.00 45.29 C
ATOM 22 N3 A B1190 59.698 110.514 132.750 1.00 46.62 N
ATOM 23 C4 A B1190 58.979 110.048 131.716 1.00 45.47 C
ATOM 24 P A B1191 52.848 112.768 129.774 1.00 42.17 P
ATOM 25 OP1 A B1191 51.601 113.534 130.009 1.00 41.54 O
ATOM 26 OP2 A B1191 52.773 111.423 129.162 1.00 42.57 O
ATOM 27 O5' A B1191 53.811 113.691 128.903 1.00 41.47 O
TER
ATOM 2 P A A1189 56.025 103.948 136.339 1.00 44.72 P
ATOM 3 OP1 A A1189 55.972 102.951 135.240 1.00 44.96 O
ATOM 4 OP2 A A1189 57.281 104.693 136.590 1.00 44.80 O
ATOM 5 O5' A A1189 54.862 105.014 136.118 1.00 43.36 O
ATOM 6 C5' A A1189 55.099 106.203 135.341 1.00 43.39 C
ATOM 7 C4' A A1189 53.803 106.730 134.768 1.00 44.58 C
ATOM 8 O4' A A1189 53.227 105.719 133.901 1.00 46.10 O
ATOM 9 C3' A A1189 52.712 107.102 135.766 1.00 44.72 C
ATOM 10 O3' A A1189 51.948 108.186 135.239 1.00 42.72 O
ATOM 11 C2' A A1189 51.878 105.823 135.834 1.00 46.18 C
ATOM 12 O2' A A1189 50.534 106.053 136.210 1.00 45.68 O
ATOM 13 C1' A A1189 51.958 105.328 134.390 1.00 47.06 C
ATOM 14 N9 A A1189 51.862 103.876 134.241 1.00 47.52 N
ATOM 15 C8 A A1189 52.850 102.959 134.492 1.00 48.91 C
ATOM 16 N7 A A1189 52.513 101.727 134.205 1.00 50.79 N
ATOM 17 C5 A A1189 51.209 101.835 133.748 1.00 48.39 C
ATOM 18 C6 A A1189 50.295 100.879 133.268 1.00 47.98 C
ATOM 19 N6 A A1189 50.563 99.575 133.167 1.00 46.27 N
ATOM 20 N1 A A1189 49.079 101.316 132.888 1.00 48.47 N
ATOM 21 C2 A A1189 48.810 102.626 132.987 1.00 49.60 C
ATOM 22 N3 A A1189 49.588 103.619 133.417 1.00 48.37 N
ATOM 23 C4 A A1189 50.788 103.151 133.785 1.00 47.66 C
ATOM 24 P A A1190 52.421 109.698 135.510 1.00 43.11 P
ATOM 25 OP1 A A1190 52.861 109.815 136.916 1.00 44.75 O
ATOM 26 OP2 A A1190 51.366 110.605 135.002 1.00 42.06 O
ATOM 27 O5' A A1190 53.723 109.865 134.604 1.00 43.39 O
TER
ATOM 1 O3' A B1189 51.948 108.186 135.239 1.00 42.72 O
ATOM 2 P A B1190 52.421 109.698 135.510 1.00 43.11 P
ATOM 3 OP1 A B1190 52.861 109.815 136.916 1.00 44.75 O
ATOM 4 OP2 A B1190 51.366 110.605 135.002 1.00 42.06 O
ATOM 5 O5' A B1190 53.723 109.865 134.604 1.00 43.39 O
ATOM 6 C5' A B1190 53.623 110.165 133.193 1.00 42.80 C
ATOM 7 C4' A B1190 54.649 111.202 132.815 1.00 42.01 C
ATOM 8 O4' A B1190 55.972 110.635 132.943 1.00 42.18 O
ATOM 9 C3' A B1190 54.633 111.675 131.375 1.00 42.25 C
ATOM 10 O3' A B1190 53.603 112.649 131.189 1.00 42.64 O
ATOM 11 C2' A B1190 56.029 112.280 131.230 1.00 42.34 C
ATOM 12 O2' A B1190 56.145 113.577 131.775 1.00 43.19 O
ATOM 13 C1' A B1190 56.861 111.343 132.105 1.00 42.57 C
ATOM 14 N9 A B1190 57.691 110.383 131.383 1.00 44.14 N
ATOM 15 C8 A B1190 57.391 109.648 130.264 1.00 44.81 C
ATOM 16 N7 A B1190 58.376 108.889 129.852 1.00 44.83 N
ATOM 17 C5 A B1190 59.390 109.136 130.765 1.00 45.36 C
ATOM 18 C6 A B1190 60.700 108.641 130.884 1.00 45.13 C
ATOM 19 N6 A B1190 61.238 107.753 130.048 1.00 43.22 N
ATOM 20 N1 A B1190 61.450 109.095 131.909 1.00 45.66 N
ATOM 21 C2 A B1190 60.914 109.978 132.754 1.00 45.29 C
ATOM 22 N3 A B1190 59.698 110.514 132.750 1.00 46.62 N
ATOM 23 C4 A B1190 58.979 110.048 131.716 1.00 45.47 C
ATOM 24 P A B1191 52.848 112.768 129.774 1.00 42.17 P
ATOM 25 OP1 A B1191 51.601 113.534 130.009 1.00 41.54 O
ATOM 26 OP2 A B1191 52.773 111.423 129.162 1.00 42.57 O
ATOM 27 O5' A B1191 53.811 113.691 128.903 1.00 41.47 O
TER
Atoms:
OP1: (55.972,102.951,135.240)
OP2: (57.281,104.693,136.590)
C3': (52.712,107.102,135.766)
C1': (51.958,105.328,134.390)
C5': (55.099,106.203,135.341)
O4': (53.227,105.719,133.901)
C8: (52.850,102.959,134.492)
O2': (50.534,106.053,136.210)
C6: (50.295,100.879,133.268)
C5: (51.209,101.835,133.748)
C4: (50.788,103.151,133.785)
P: (56.025,103.948,136.339)
C4': (53.803,106.730,134.768)
C2': (51.878,105.823,135.834)
C2: (48.810,102.626,132.987)
N1: (49.079,101.316,132.888)
N3: (49.588,103.619,133.417)
N6: (50.563,99.575,133.167)
N7: (52.513,101.727,134.205)
N9: (51.862,103.876,134.241)
O5': (54.862,105.014,136.118)
O3': (51.948,108.186,135.239)
OP2: (57.281,104.693,136.590)
C3': (52.712,107.102,135.766)
C1': (51.958,105.328,134.390)
C5': (55.099,106.203,135.341)
O4': (53.227,105.719,133.901)
C8: (52.850,102.959,134.492)
O2': (50.534,106.053,136.210)
C6: (50.295,100.879,133.268)
C5: (51.209,101.835,133.748)
C4: (50.788,103.151,133.785)
P: (56.025,103.948,136.339)
C4': (53.803,106.730,134.768)
C2': (51.878,105.823,135.834)
C2: (48.810,102.626,132.987)
N1: (49.079,101.316,132.888)
N3: (49.588,103.619,133.417)
N6: (50.563,99.575,133.167)
N7: (52.513,101.727,134.205)
N9: (51.862,103.876,134.241)
O5': (54.862,105.014,136.118)
O3': (51.948,108.186,135.239)
OP1: (52.861,109.815,136.916)
OP2: (51.366,110.605,135.002)
C3': (54.633,111.675,131.375)
C1': (56.861,111.343,132.105)
C5': (53.623,110.165,133.193)
O4': (55.972,110.635,132.943)
C8: (57.391,109.648,130.264)
O2': (56.145,113.577,131.775)
C6: (60.700,108.641,130.884)
C5: (59.390,109.136,130.765)
C4: (58.979,110.048,131.716)
P: (52.421,109.698,135.510)
C4': (54.649,111.202,132.815)
C2': (56.029,112.280,131.230)
C2: (60.914,109.978,132.754)
N1: (61.450,109.095,131.909)
N3: (59.698,110.514,132.750)
N6: (61.238,107.753,130.048)
N7: (58.376,108.889,129.852)
N9: (57.691,110.383,131.383)
O5': (53.723,109.865,134.604)
O3': (53.603,112.649,131.189)
OP2: (51.366,110.605,135.002)
C3': (54.633,111.675,131.375)
C1': (56.861,111.343,132.105)
C5': (53.623,110.165,133.193)
O4': (55.972,110.635,132.943)
C8: (57.391,109.648,130.264)
O2': (56.145,113.577,131.775)
C6: (60.700,108.641,130.884)
C5: (59.390,109.136,130.765)
C4: (58.979,110.048,131.716)
P: (52.421,109.698,135.510)
C4': (54.649,111.202,132.815)
C2': (56.029,112.280,131.230)
C2: (60.914,109.978,132.754)
N1: (61.450,109.095,131.909)
N3: (59.698,110.514,132.750)
N6: (61.238,107.753,130.048)
N7: (58.376,108.889,129.852)
N9: (57.691,110.383,131.383)
O5': (53.723,109.865,134.604)
O3': (53.603,112.649,131.189)
Image (generated by PyMOL):