Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A468:A463
Extra
PDB:
ATOM 1 O3' C A 467 53.252 -79.187 -42.551 1.00 31.01 O
ATOM 2 P A A 468 53.609 -80.479 -43.426 1.00 32.27 P
ATOM 3 OP1 A A 468 54.299 -81.438 -42.536 1.00 35.35 O
ATOM 4 OP2 A A 468 54.288 -80.011 -44.633 1.00 34.29 O
ATOM 5 O5' A A 468 52.183 -81.053 -43.802 1.00 42.61 O
ATOM 6 C5' A A 468 51.578 -80.737 -45.040 1.00 33.67 C
ATOM 7 C4' A A 468 51.122 -81.978 -45.741 1.00 34.63 C
ATOM 8 O4' A A 468 52.276 -82.702 -46.230 1.00 35.56 O
ATOM 9 C3' A A 468 50.341 -82.960 -44.882 1.00 34.76 C
ATOM 10 O3' A A 468 49.368 -83.599 -45.695 1.00 41.52 O
ATOM 11 C2' A A 468 51.403 -83.970 -44.483 1.00 30.72 C
ATOM 12 O2' A A 468 50.898 -85.238 -44.140 1.00 32.22 O
ATOM 13 C1' A A 468 52.236 -84.024 -45.751 1.00 35.19 C
ATOM 14 N9 A A 468 53.608 -84.471 -45.549 1.00 39.30 N
ATOM 15 C8 A A 468 54.524 -84.012 -44.643 1.00 37.47 C
ATOM 16 N7 A A 468 55.679 -84.637 -44.739 1.00 35.35 N
ATOM 17 C5 A A 468 55.510 -85.537 -45.761 1.00 32.95 C
ATOM 18 C6 A A 468 56.362 -86.468 -46.334 1.00 32.61 C
ATOM 19 N6 A A 468 57.609 -86.664 -45.961 1.00 35.17 N
ATOM 20 N1 A A 468 55.871 -87.213 -47.340 1.00 39.60 N
ATOM 21 C2 A A 468 54.604 -87.019 -47.746 1.00 35.83 C
ATOM 22 N3 A A 468 53.703 -86.152 -47.285 1.00 31.78 N
ATOM 23 C4 A A 468 54.232 -85.444 -46.277 1.00 35.46 C
ATOM 24 P C A 469 48.041 -82.817 -46.121 1.00 39.39 P
ATOM 25 OP1 C A 469 47.312 -83.709 -47.040 1.00 58.88 O
ATOM 26 OP2 C A 469 48.429 -81.484 -46.606 1.00 43.25 O
ATOM 27 O5' C A 469 47.265 -82.675 -44.737 1.00 37.14 O
TER
ATOM 1 O3' U B 462 64.116 -80.931 -37.948 1.00 31.82 O
ATOM 2 P A B 463 63.992 -80.038 -39.288 1.00 33.74 P
ATOM 3 OP1 A B 463 65.076 -79.028 -39.268 1.00 28.84 O
ATOM 4 OP2 A B 463 62.591 -79.561 -39.349 1.00 30.31 O
ATOM 5 O5' A B 463 64.251 -81.103 -40.435 1.00 23.65 O
ATOM 6 C5' A B 463 65.280 -82.064 -40.312 1.00 27.84 C
ATOM 7 C4' A B 463 65.531 -82.773 -41.618 1.00 32.30 C
ATOM 8 O4' A B 463 64.751 -83.997 -41.667 1.00 33.86 O
ATOM 9 C3' A B 463 65.141 -82.012 -42.870 1.00 23.54 C
ATOM 10 O3' A B 463 66.170 -81.182 -43.333 1.00 23.82 O
ATOM 11 C2' A B 463 64.798 -83.113 -43.840 1.00 27.45 C
ATOM 12 O2' A B 463 65.977 -83.674 -44.385 1.00 30.49 O
ATOM 13 C1' A B 463 64.150 -84.131 -42.920 1.00 30.52 C
ATOM 14 N9 A B 463 62.719 -83.859 -42.743 1.00 33.79 N
ATOM 15 C8 A B 463 62.156 -83.204 -41.673 1.00 32.17 C
ATOM 16 N7 A B 463 60.860 -83.061 -41.734 1.00 31.50 N
ATOM 17 C5 A B 463 60.560 -83.712 -42.936 1.00 38.39 C
ATOM 18 C6 A B 463 59.347 -83.946 -43.600 1.00 35.18 C
ATOM 19 N6 A B 463 58.176 -83.537 -43.114 1.00 34.45 N
ATOM 20 N1 A B 463 59.381 -84.606 -44.771 1.00 31.90 N
ATOM 21 C2 A B 463 60.551 -85.013 -45.235 1.00 30.26 C
ATOM 22 N3 A B 463 61.754 -84.860 -44.710 1.00 29.20 N
ATOM 23 C4 A B 463 61.687 -84.198 -43.562 1.00 31.02 C
ATOM 24 P G B 464 65.866 -80.017 -44.389 1.00 34.04 P
ATOM 25 OP1 G B 464 67.070 -79.867 -45.230 1.00 31.24 O
ATOM 26 OP2 G B 464 65.371 -78.835 -43.603 1.00 31.06 O
ATOM 27 O5' G B 464 64.702 -80.612 -45.265 1.00 27.85 O
TER
ATOM 2 P A A 468 53.609 -80.479 -43.426 1.00 32.27 P
ATOM 3 OP1 A A 468 54.299 -81.438 -42.536 1.00 35.35 O
ATOM 4 OP2 A A 468 54.288 -80.011 -44.633 1.00 34.29 O
ATOM 5 O5' A A 468 52.183 -81.053 -43.802 1.00 42.61 O
ATOM 6 C5' A A 468 51.578 -80.737 -45.040 1.00 33.67 C
ATOM 7 C4' A A 468 51.122 -81.978 -45.741 1.00 34.63 C
ATOM 8 O4' A A 468 52.276 -82.702 -46.230 1.00 35.56 O
ATOM 9 C3' A A 468 50.341 -82.960 -44.882 1.00 34.76 C
ATOM 10 O3' A A 468 49.368 -83.599 -45.695 1.00 41.52 O
ATOM 11 C2' A A 468 51.403 -83.970 -44.483 1.00 30.72 C
ATOM 12 O2' A A 468 50.898 -85.238 -44.140 1.00 32.22 O
ATOM 13 C1' A A 468 52.236 -84.024 -45.751 1.00 35.19 C
ATOM 14 N9 A A 468 53.608 -84.471 -45.549 1.00 39.30 N
ATOM 15 C8 A A 468 54.524 -84.012 -44.643 1.00 37.47 C
ATOM 16 N7 A A 468 55.679 -84.637 -44.739 1.00 35.35 N
ATOM 17 C5 A A 468 55.510 -85.537 -45.761 1.00 32.95 C
ATOM 18 C6 A A 468 56.362 -86.468 -46.334 1.00 32.61 C
ATOM 19 N6 A A 468 57.609 -86.664 -45.961 1.00 35.17 N
ATOM 20 N1 A A 468 55.871 -87.213 -47.340 1.00 39.60 N
ATOM 21 C2 A A 468 54.604 -87.019 -47.746 1.00 35.83 C
ATOM 22 N3 A A 468 53.703 -86.152 -47.285 1.00 31.78 N
ATOM 23 C4 A A 468 54.232 -85.444 -46.277 1.00 35.46 C
ATOM 24 P C A 469 48.041 -82.817 -46.121 1.00 39.39 P
ATOM 25 OP1 C A 469 47.312 -83.709 -47.040 1.00 58.88 O
ATOM 26 OP2 C A 469 48.429 -81.484 -46.606 1.00 43.25 O
ATOM 27 O5' C A 469 47.265 -82.675 -44.737 1.00 37.14 O
TER
ATOM 1 O3' U B 462 64.116 -80.931 -37.948 1.00 31.82 O
ATOM 2 P A B 463 63.992 -80.038 -39.288 1.00 33.74 P
ATOM 3 OP1 A B 463 65.076 -79.028 -39.268 1.00 28.84 O
ATOM 4 OP2 A B 463 62.591 -79.561 -39.349 1.00 30.31 O
ATOM 5 O5' A B 463 64.251 -81.103 -40.435 1.00 23.65 O
ATOM 6 C5' A B 463 65.280 -82.064 -40.312 1.00 27.84 C
ATOM 7 C4' A B 463 65.531 -82.773 -41.618 1.00 32.30 C
ATOM 8 O4' A B 463 64.751 -83.997 -41.667 1.00 33.86 O
ATOM 9 C3' A B 463 65.141 -82.012 -42.870 1.00 23.54 C
ATOM 10 O3' A B 463 66.170 -81.182 -43.333 1.00 23.82 O
ATOM 11 C2' A B 463 64.798 -83.113 -43.840 1.00 27.45 C
ATOM 12 O2' A B 463 65.977 -83.674 -44.385 1.00 30.49 O
ATOM 13 C1' A B 463 64.150 -84.131 -42.920 1.00 30.52 C
ATOM 14 N9 A B 463 62.719 -83.859 -42.743 1.00 33.79 N
ATOM 15 C8 A B 463 62.156 -83.204 -41.673 1.00 32.17 C
ATOM 16 N7 A B 463 60.860 -83.061 -41.734 1.00 31.50 N
ATOM 17 C5 A B 463 60.560 -83.712 -42.936 1.00 38.39 C
ATOM 18 C6 A B 463 59.347 -83.946 -43.600 1.00 35.18 C
ATOM 19 N6 A B 463 58.176 -83.537 -43.114 1.00 34.45 N
ATOM 20 N1 A B 463 59.381 -84.606 -44.771 1.00 31.90 N
ATOM 21 C2 A B 463 60.551 -85.013 -45.235 1.00 30.26 C
ATOM 22 N3 A B 463 61.754 -84.860 -44.710 1.00 29.20 N
ATOM 23 C4 A B 463 61.687 -84.198 -43.562 1.00 31.02 C
ATOM 24 P G B 464 65.866 -80.017 -44.389 1.00 34.04 P
ATOM 25 OP1 G B 464 67.070 -79.867 -45.230 1.00 31.24 O
ATOM 26 OP2 G B 464 65.371 -78.835 -43.603 1.00 31.06 O
ATOM 27 O5' G B 464 64.702 -80.612 -45.265 1.00 27.85 O
TER
Atoms:
OP1: (54.299,-81.438,-42.536)
OP2: (54.288,-80.011,-44.633)
C3': (50.341,-82.960,-44.882)
C1': (52.236,-84.024,-45.751)
C5': (51.578,-80.737,-45.040)
O4': (52.276,-82.702,-46.230)
C8: (54.524,-84.012,-44.643)
O2': (50.898,-85.238,-44.140)
C6: (56.362,-86.468,-46.334)
C5: (55.510,-85.537,-45.761)
C4: (54.232,-85.444,-46.277)
P: (53.609,-80.479,-43.426)
C4': (51.122,-81.978,-45.741)
C2': (51.403,-83.970,-44.483)
C2: (54.604,-87.019,-47.746)
N1: (55.871,-87.213,-47.340)
N3: (53.703,-86.152,-47.285)
N6: (57.609,-86.664,-45.961)
N7: (55.679,-84.637,-44.739)
N9: (53.608,-84.471,-45.549)
O5': (52.183,-81.053,-43.802)
O3': (49.368,-83.599,-45.695)
OP2: (54.288,-80.011,-44.633)
C3': (50.341,-82.960,-44.882)
C1': (52.236,-84.024,-45.751)
C5': (51.578,-80.737,-45.040)
O4': (52.276,-82.702,-46.230)
C8: (54.524,-84.012,-44.643)
O2': (50.898,-85.238,-44.140)
C6: (56.362,-86.468,-46.334)
C5: (55.510,-85.537,-45.761)
C4: (54.232,-85.444,-46.277)
P: (53.609,-80.479,-43.426)
C4': (51.122,-81.978,-45.741)
C2': (51.403,-83.970,-44.483)
C2: (54.604,-87.019,-47.746)
N1: (55.871,-87.213,-47.340)
N3: (53.703,-86.152,-47.285)
N6: (57.609,-86.664,-45.961)
N7: (55.679,-84.637,-44.739)
N9: (53.608,-84.471,-45.549)
O5': (52.183,-81.053,-43.802)
O3': (49.368,-83.599,-45.695)
OP1: (65.076,-79.028,-39.268)
OP2: (62.591,-79.561,-39.349)
C3': (65.141,-82.012,-42.870)
C1': (64.150,-84.131,-42.920)
C5': (65.280,-82.064,-40.312)
O4': (64.751,-83.997,-41.667)
C8: (62.156,-83.204,-41.673)
O2': (65.977,-83.674,-44.385)
C6: (59.347,-83.946,-43.600)
C5: (60.560,-83.712,-42.936)
C4: (61.687,-84.198,-43.562)
P: (63.992,-80.038,-39.288)
C4': (65.531,-82.773,-41.618)
C2': (64.798,-83.113,-43.840)
C2: (60.551,-85.013,-45.235)
N1: (59.381,-84.606,-44.771)
N3: (61.754,-84.860,-44.710)
N6: (58.176,-83.537,-43.114)
N7: (60.860,-83.061,-41.734)
N9: (62.719,-83.859,-42.743)
O5': (64.251,-81.103,-40.435)
O3': (66.170,-81.182,-43.333)
OP2: (62.591,-79.561,-39.349)
C3': (65.141,-82.012,-42.870)
C1': (64.150,-84.131,-42.920)
C5': (65.280,-82.064,-40.312)
O4': (64.751,-83.997,-41.667)
C8: (62.156,-83.204,-41.673)
O2': (65.977,-83.674,-44.385)
C6: (59.347,-83.946,-43.600)
C5: (60.560,-83.712,-42.936)
C4: (61.687,-84.198,-43.562)
P: (63.992,-80.038,-39.288)
C4': (65.531,-82.773,-41.618)
C2': (64.798,-83.113,-43.840)
C2: (60.551,-85.013,-45.235)
N1: (59.381,-84.606,-44.771)
N3: (61.754,-84.860,-44.710)
N6: (58.176,-83.537,-43.114)
N7: (60.860,-83.061,-41.734)
N9: (62.719,-83.859,-42.743)
O5': (64.251,-81.103,-40.435)
O3': (66.170,-81.182,-43.333)
Image (generated by PyMOL):