Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNK:A1080:A1081
Extra
PDB:
ATOM 1 O3' G A1079 43.101 -91.076 137.273 1.00 77.69 O
ATOM 2 P A A1080 44.230 -92.185 137.571 1.00 83.22 P
ATOM 3 OP1 A A1080 43.635 -93.537 137.742 1.00 84.85 O
ATOM 4 OP2 A A1080 45.074 -91.623 138.653 1.00 82.01 O
ATOM 5 O5' A A1080 45.072 -92.218 136.215 1.00 90.51 O
ATOM 6 C5' A A1080 46.345 -92.864 136.134 1.00 81.42 C
ATOM 7 C4' A A1080 46.538 -93.424 134.747 1.00 84.90 C
ATOM 8 O4' A A1080 45.476 -94.364 134.539 1.00 86.00 O
ATOM 9 C3' A A1080 46.459 -92.420 133.591 1.00 90.16 C
ATOM 10 O3' A A1080 47.783 -92.194 133.093 1.00 91.45 O
ATOM 11 C2' A A1080 45.657 -93.138 132.491 1.00 88.24 C
ATOM 12 O2' A A1080 46.406 -93.412 131.318 1.00 86.35 O
ATOM 13 C1' A A1080 45.201 -94.432 133.166 1.00 89.53 C
ATOM 14 N9 A A1080 43.797 -94.801 133.012 1.00 94.43 N
ATOM 15 C8 A A1080 42.715 -94.420 133.767 1.00 95.57 C
ATOM 16 N7 A A1080 41.603 -95.032 133.436 1.00 96.88 N
ATOM 17 C5 A A1080 41.976 -95.849 132.379 1.00 92.43 C
ATOM 18 C6 A A1080 41.264 -96.767 131.607 1.00 92.32 C
ATOM 19 N6 A A1080 39.978 -97.046 131.792 1.00 97.99 N
ATOM 20 N1 A A1080 41.931 -97.415 130.628 1.00 93.65 N
ATOM 21 C2 A A1080 43.230 -97.152 130.452 1.00 97.59 C
ATOM 22 N3 A A1080 44.013 -96.320 131.122 1.00 96.99 N
ATOM 23 C4 A A1080 43.316 -95.694 132.087 1.00 95.23 C
ATOM 24 P A A1081 48.490 -90.759 133.266 1.00 89.83 P
ATOM 25 OP1 A A1081 47.575 -89.825 133.978 1.00 91.83 O
ATOM 26 OP2 A A1081 49.006 -90.407 131.923 1.00 79.34 O
ATOM 27 O5' A A1081 49.749 -91.078 134.192 1.00 85.71 O
TER
ATOM 1 O3' A B1080 47.783 -92.194 133.093 1.00 91.45 O
ATOM 2 P A B1081 48.490 -90.759 133.266 1.00 89.83 P
ATOM 3 OP1 A B1081 47.575 -89.825 133.978 1.00 91.83 O
ATOM 4 OP2 A B1081 49.006 -90.407 131.923 1.00 79.34 O
ATOM 5 O5' A B1081 49.749 -91.078 134.192 1.00 85.71 O
ATOM 6 C5' A B1081 50.414 -92.324 134.056 1.00 85.21 C
ATOM 7 C4' A B1081 51.738 -92.310 134.760 1.00 85.55 C
ATOM 8 O4' A B1081 51.526 -92.189 136.192 1.00 79.41 O
ATOM 9 C3' A B1081 52.462 -93.640 134.596 1.00 87.42 C
ATOM 10 O3' A B1081 53.191 -93.689 133.370 1.00 91.78 O
ATOM 11 C2' A B1081 53.333 -93.705 135.839 1.00 86.33 C
ATOM 12 O2' A B1081 54.499 -92.930 135.748 1.00 84.55 O
ATOM 13 C1' A B1081 52.446 -93.018 136.872 1.00 81.85 C
ATOM 14 N9 A B1081 51.727 -93.930 137.761 1.00 80.42 N
ATOM 15 C8 A B1081 51.332 -95.231 137.568 1.00 74.33 C
ATOM 16 N7 A B1081 50.796 -95.780 138.630 1.00 71.26 N
ATOM 17 C5 A B1081 50.819 -94.766 139.577 1.00 74.67 C
ATOM 18 C6 A B1081 50.415 -94.708 140.928 1.00 73.15 C
ATOM 19 N6 A B1081 49.904 -95.742 141.599 1.00 77.54 N
ATOM 20 N1 A B1081 50.564 -93.534 141.580 1.00 73.52 N
ATOM 21 C2 A B1081 51.091 -92.499 140.918 1.00 78.28 C
ATOM 22 N3 A B1081 51.523 -92.433 139.661 1.00 79.53 N
ATOM 23 C4 A B1081 51.359 -93.614 139.042 1.00 79.96 C
ATOM 24 P A B1082 53.357 -95.101 132.591 1.00100.72 P
ATOM 25 OP1 A B1082 53.428 -94.845 131.129 1.00 98.32 O
ATOM 26 OP2 A B1082 52.388 -96.099 133.127 1.00 79.87 O
ATOM 27 O5' A B1082 54.791 -95.627 133.030 1.00 93.16 O
TER
ATOM 2 P A A1080 44.230 -92.185 137.571 1.00 83.22 P
ATOM 3 OP1 A A1080 43.635 -93.537 137.742 1.00 84.85 O
ATOM 4 OP2 A A1080 45.074 -91.623 138.653 1.00 82.01 O
ATOM 5 O5' A A1080 45.072 -92.218 136.215 1.00 90.51 O
ATOM 6 C5' A A1080 46.345 -92.864 136.134 1.00 81.42 C
ATOM 7 C4' A A1080 46.538 -93.424 134.747 1.00 84.90 C
ATOM 8 O4' A A1080 45.476 -94.364 134.539 1.00 86.00 O
ATOM 9 C3' A A1080 46.459 -92.420 133.591 1.00 90.16 C
ATOM 10 O3' A A1080 47.783 -92.194 133.093 1.00 91.45 O
ATOM 11 C2' A A1080 45.657 -93.138 132.491 1.00 88.24 C
ATOM 12 O2' A A1080 46.406 -93.412 131.318 1.00 86.35 O
ATOM 13 C1' A A1080 45.201 -94.432 133.166 1.00 89.53 C
ATOM 14 N9 A A1080 43.797 -94.801 133.012 1.00 94.43 N
ATOM 15 C8 A A1080 42.715 -94.420 133.767 1.00 95.57 C
ATOM 16 N7 A A1080 41.603 -95.032 133.436 1.00 96.88 N
ATOM 17 C5 A A1080 41.976 -95.849 132.379 1.00 92.43 C
ATOM 18 C6 A A1080 41.264 -96.767 131.607 1.00 92.32 C
ATOM 19 N6 A A1080 39.978 -97.046 131.792 1.00 97.99 N
ATOM 20 N1 A A1080 41.931 -97.415 130.628 1.00 93.65 N
ATOM 21 C2 A A1080 43.230 -97.152 130.452 1.00 97.59 C
ATOM 22 N3 A A1080 44.013 -96.320 131.122 1.00 96.99 N
ATOM 23 C4 A A1080 43.316 -95.694 132.087 1.00 95.23 C
ATOM 24 P A A1081 48.490 -90.759 133.266 1.00 89.83 P
ATOM 25 OP1 A A1081 47.575 -89.825 133.978 1.00 91.83 O
ATOM 26 OP2 A A1081 49.006 -90.407 131.923 1.00 79.34 O
ATOM 27 O5' A A1081 49.749 -91.078 134.192 1.00 85.71 O
TER
ATOM 1 O3' A B1080 47.783 -92.194 133.093 1.00 91.45 O
ATOM 2 P A B1081 48.490 -90.759 133.266 1.00 89.83 P
ATOM 3 OP1 A B1081 47.575 -89.825 133.978 1.00 91.83 O
ATOM 4 OP2 A B1081 49.006 -90.407 131.923 1.00 79.34 O
ATOM 5 O5' A B1081 49.749 -91.078 134.192 1.00 85.71 O
ATOM 6 C5' A B1081 50.414 -92.324 134.056 1.00 85.21 C
ATOM 7 C4' A B1081 51.738 -92.310 134.760 1.00 85.55 C
ATOM 8 O4' A B1081 51.526 -92.189 136.192 1.00 79.41 O
ATOM 9 C3' A B1081 52.462 -93.640 134.596 1.00 87.42 C
ATOM 10 O3' A B1081 53.191 -93.689 133.370 1.00 91.78 O
ATOM 11 C2' A B1081 53.333 -93.705 135.839 1.00 86.33 C
ATOM 12 O2' A B1081 54.499 -92.930 135.748 1.00 84.55 O
ATOM 13 C1' A B1081 52.446 -93.018 136.872 1.00 81.85 C
ATOM 14 N9 A B1081 51.727 -93.930 137.761 1.00 80.42 N
ATOM 15 C8 A B1081 51.332 -95.231 137.568 1.00 74.33 C
ATOM 16 N7 A B1081 50.796 -95.780 138.630 1.00 71.26 N
ATOM 17 C5 A B1081 50.819 -94.766 139.577 1.00 74.67 C
ATOM 18 C6 A B1081 50.415 -94.708 140.928 1.00 73.15 C
ATOM 19 N6 A B1081 49.904 -95.742 141.599 1.00 77.54 N
ATOM 20 N1 A B1081 50.564 -93.534 141.580 1.00 73.52 N
ATOM 21 C2 A B1081 51.091 -92.499 140.918 1.00 78.28 C
ATOM 22 N3 A B1081 51.523 -92.433 139.661 1.00 79.53 N
ATOM 23 C4 A B1081 51.359 -93.614 139.042 1.00 79.96 C
ATOM 24 P A B1082 53.357 -95.101 132.591 1.00100.72 P
ATOM 25 OP1 A B1082 53.428 -94.845 131.129 1.00 98.32 O
ATOM 26 OP2 A B1082 52.388 -96.099 133.127 1.00 79.87 O
ATOM 27 O5' A B1082 54.791 -95.627 133.030 1.00 93.16 O
TER
Atoms:
OP1: (43.635,-93.537,137.742)
OP2: (45.074,-91.623,138.653)
C3': (46.459,-92.420,133.591)
C1': (45.201,-94.432,133.166)
C5': (46.345,-92.864,136.134)
O4': (45.476,-94.364,134.539)
C8: (42.715,-94.420,133.767)
O2': (46.406,-93.412,131.318)
C6: (41.264,-96.767,131.607)
C5: (41.976,-95.849,132.379)
C4: (43.316,-95.694,132.087)
P: (44.230,-92.185,137.571)
C4': (46.538,-93.424,134.747)
C2': (45.657,-93.138,132.491)
C2: (43.230,-97.152,130.452)
N1: (41.931,-97.415,130.628)
N3: (44.013,-96.320,131.122)
N6: (39.978,-97.046,131.792)
N7: (41.603,-95.032,133.436)
N9: (43.797,-94.801,133.012)
O5': (45.072,-92.218,136.215)
O3': (47.783,-92.194,133.093)
OP2: (45.074,-91.623,138.653)
C3': (46.459,-92.420,133.591)
C1': (45.201,-94.432,133.166)
C5': (46.345,-92.864,136.134)
O4': (45.476,-94.364,134.539)
C8: (42.715,-94.420,133.767)
O2': (46.406,-93.412,131.318)
C6: (41.264,-96.767,131.607)
C5: (41.976,-95.849,132.379)
C4: (43.316,-95.694,132.087)
P: (44.230,-92.185,137.571)
C4': (46.538,-93.424,134.747)
C2': (45.657,-93.138,132.491)
C2: (43.230,-97.152,130.452)
N1: (41.931,-97.415,130.628)
N3: (44.013,-96.320,131.122)
N6: (39.978,-97.046,131.792)
N7: (41.603,-95.032,133.436)
N9: (43.797,-94.801,133.012)
O5': (45.072,-92.218,136.215)
O3': (47.783,-92.194,133.093)
OP1: (47.575,-89.825,133.978)
OP2: (49.006,-90.407,131.923)
C3': (52.462,-93.640,134.596)
C1': (52.446,-93.018,136.872)
C5': (50.414,-92.324,134.056)
O4': (51.526,-92.189,136.192)
C8: (51.332,-95.231,137.568)
O2': (54.499,-92.930,135.748)
C6: (50.415,-94.708,140.928)
C5: (50.819,-94.766,139.577)
C4: (51.359,-93.614,139.042)
P: (48.490,-90.759,133.266)
C4': (51.738,-92.310,134.760)
C2': (53.333,-93.705,135.839)
C2: (51.091,-92.499,140.918)
N1: (50.564,-93.534,141.580)
N3: (51.523,-92.433,139.661)
N6: (49.904,-95.742,141.599)
N7: (50.796,-95.780,138.630)
N9: (51.727,-93.930,137.761)
O5': (49.749,-91.078,134.192)
O3': (53.191,-93.689,133.370)
OP2: (49.006,-90.407,131.923)
C3': (52.462,-93.640,134.596)
C1': (52.446,-93.018,136.872)
C5': (50.414,-92.324,134.056)
O4': (51.526,-92.189,136.192)
C8: (51.332,-95.231,137.568)
O2': (54.499,-92.930,135.748)
C6: (50.415,-94.708,140.928)
C5: (50.819,-94.766,139.577)
C4: (51.359,-93.614,139.042)
P: (48.490,-90.759,133.266)
C4': (51.738,-92.310,134.760)
C2': (53.333,-93.705,135.839)
C2: (51.091,-92.499,140.918)
N1: (50.564,-93.534,141.580)
N3: (51.523,-92.433,139.661)
N6: (49.904,-95.742,141.599)
N7: (50.796,-95.780,138.630)
N9: (51.727,-93.930,137.761)
O5': (49.749,-91.078,134.192)
O3': (53.191,-93.689,133.370)
Image (generated by PyMOL):