Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11056:11313
Extra
PDB:
ATOM 1 O3' U A1055 60.272 -29.757 67.511 1.00 36.02 O
ATOM 2 P A A1056 58.897 -29.301 66.818 1.00 33.32 P
ATOM 3 OP1 A A1056 57.904 -28.979 67.901 1.00 33.22 O
ATOM 4 OP2 A A1056 58.552 -30.354 65.817 1.00 33.43 O
ATOM 5 O5' A A1056 59.349 -27.984 66.039 1.00 33.18 O
ATOM 6 C5' A A1056 60.064 -26.944 66.662 1.00 33.12 C
ATOM 7 C4' A A1056 60.443 -25.904 65.644 1.00 33.02 C
ATOM 8 O4' A A1056 60.940 -26.562 64.486 1.00 33.13 O
ATOM 9 C3' A A1056 59.330 -25.094 65.080 1.00 32.83 C
ATOM 10 O3' A A1056 58.927 -24.055 65.925 1.00 32.70 O
ATOM 11 C2' A A1056 59.909 -24.606 63.785 1.00 32.83 C
ATOM 12 O2' A A1056 60.779 -23.557 64.053 1.00 32.79 O
ATOM 13 C1' A A1056 60.739 -25.774 63.363 1.00 33.03 C
ATOM 14 N9 A A1056 60.113 -26.609 62.341 1.00 33.08 N
ATOM 15 C8 A A1056 59.824 -27.929 62.555 1.00 33.22 C
ATOM 16 N7 A A1056 59.308 -28.560 61.529 1.00 33.27 N
ATOM 17 C5 A A1056 59.298 -27.582 60.584 1.00 33.17 C
ATOM 18 C6 A A1056 58.896 -27.654 59.281 1.00 33.18 C
ATOM 19 N6 A A1056 58.404 -28.791 58.778 1.00 33.31 N
ATOM 20 N1 A A1056 59.025 -26.528 58.545 1.00 33.08 N
ATOM 21 C2 A A1056 59.498 -25.442 59.114 1.00 32.97 C
ATOM 22 N3 A A1056 59.914 -25.275 60.345 1.00 32.95 N
ATOM 23 C4 A A1056 59.798 -26.390 61.036 1.00 33.05 C
ATOM 24 P G A1057 57.384 -23.769 66.067 1.00 31.31 P
ATOM 25 OP1 G A1057 57.215 -22.692 67.035 1.00 31.21 O
ATOM 26 OP2 G A1057 56.756 -25.029 66.325 1.00 31.40 O
ATOM 27 O5' G A1057 57.002 -23.254 64.617 1.00 31.23 O
TER
ATOM 1 O3' U B1312 60.287 -13.023 57.169 1.00 31.28 O
ATOM 2 P A B1313 60.590 -13.660 58.567 1.00 32.27 P
ATOM 3 OP1 A B1313 60.129 -12.709 59.566 1.00 32.17 O
ATOM 4 OP2 A B1313 62.101 -14.066 58.594 1.00 32.41 O
ATOM 5 O5' A B1313 59.675 -14.955 58.564 1.00 32.25 O
ATOM 6 C5' A B1313 58.442 -14.951 59.263 1.00 32.14 C
ATOM 7 C4' A B1313 57.854 -16.331 59.417 1.00 32.17 C
ATOM 8 O4' A B1313 57.735 -16.979 58.146 1.00 32.24 O
ATOM 9 C3' A B1313 58.647 -17.308 60.207 1.00 32.26 C
ATOM 10 O3' A B1313 58.573 -17.069 61.576 1.00 32.21 O
ATOM 11 C2' A B1313 58.025 -18.619 59.797 1.00 32.31 C
ATOM 12 O2' A B1313 56.800 -18.816 60.465 1.00 32.23 O
ATOM 13 C1' A B1313 57.733 -18.363 58.335 1.00 32.32 C
ATOM 14 N9 A B1313 58.748 -18.944 57.465 1.00 32.47 N
ATOM 15 C8 A B1313 59.729 -18.362 56.718 1.00 32.53 C
ATOM 16 N7 A B1313 60.391 -19.214 56.026 1.00 32.68 N
ATOM 17 C5 A B1313 59.838 -20.403 56.367 1.00 32.71 C
ATOM 18 C6 A B1313 60.121 -21.689 55.998 1.00 32.86 C
ATOM 19 N6 A B1313 61.075 -22.000 55.143 1.00 33.01 N
ATOM 20 N1 A B1313 59.371 -22.658 56.540 1.00 32.87 N
ATOM 21 C2 A B1313 58.363 -22.384 57.394 1.00 32.73 C
ATOM 22 N3 A B1313 57.982 -21.195 57.816 1.00 32.58 N
ATOM 23 C4 A B1313 58.807 -20.268 57.259 1.00 32.58 C
ATOM 24 P G B1314 59.912 -16.845 62.423 1.00 32.59 P
ATOM 25 OP1 G B1314 59.485 -16.699 63.821 1.00 32.54 O
ATOM 26 OP2 G B1314 60.682 -15.728 61.791 1.00 32.59 O
ATOM 27 O5' G B1314 60.661 -18.235 62.195 1.00 32.74 O
TER
ATOM 2 P A A1056 58.897 -29.301 66.818 1.00 33.32 P
ATOM 3 OP1 A A1056 57.904 -28.979 67.901 1.00 33.22 O
ATOM 4 OP2 A A1056 58.552 -30.354 65.817 1.00 33.43 O
ATOM 5 O5' A A1056 59.349 -27.984 66.039 1.00 33.18 O
ATOM 6 C5' A A1056 60.064 -26.944 66.662 1.00 33.12 C
ATOM 7 C4' A A1056 60.443 -25.904 65.644 1.00 33.02 C
ATOM 8 O4' A A1056 60.940 -26.562 64.486 1.00 33.13 O
ATOM 9 C3' A A1056 59.330 -25.094 65.080 1.00 32.83 C
ATOM 10 O3' A A1056 58.927 -24.055 65.925 1.00 32.70 O
ATOM 11 C2' A A1056 59.909 -24.606 63.785 1.00 32.83 C
ATOM 12 O2' A A1056 60.779 -23.557 64.053 1.00 32.79 O
ATOM 13 C1' A A1056 60.739 -25.774 63.363 1.00 33.03 C
ATOM 14 N9 A A1056 60.113 -26.609 62.341 1.00 33.08 N
ATOM 15 C8 A A1056 59.824 -27.929 62.555 1.00 33.22 C
ATOM 16 N7 A A1056 59.308 -28.560 61.529 1.00 33.27 N
ATOM 17 C5 A A1056 59.298 -27.582 60.584 1.00 33.17 C
ATOM 18 C6 A A1056 58.896 -27.654 59.281 1.00 33.18 C
ATOM 19 N6 A A1056 58.404 -28.791 58.778 1.00 33.31 N
ATOM 20 N1 A A1056 59.025 -26.528 58.545 1.00 33.08 N
ATOM 21 C2 A A1056 59.498 -25.442 59.114 1.00 32.97 C
ATOM 22 N3 A A1056 59.914 -25.275 60.345 1.00 32.95 N
ATOM 23 C4 A A1056 59.798 -26.390 61.036 1.00 33.05 C
ATOM 24 P G A1057 57.384 -23.769 66.067 1.00 31.31 P
ATOM 25 OP1 G A1057 57.215 -22.692 67.035 1.00 31.21 O
ATOM 26 OP2 G A1057 56.756 -25.029 66.325 1.00 31.40 O
ATOM 27 O5' G A1057 57.002 -23.254 64.617 1.00 31.23 O
TER
ATOM 1 O3' U B1312 60.287 -13.023 57.169 1.00 31.28 O
ATOM 2 P A B1313 60.590 -13.660 58.567 1.00 32.27 P
ATOM 3 OP1 A B1313 60.129 -12.709 59.566 1.00 32.17 O
ATOM 4 OP2 A B1313 62.101 -14.066 58.594 1.00 32.41 O
ATOM 5 O5' A B1313 59.675 -14.955 58.564 1.00 32.25 O
ATOM 6 C5' A B1313 58.442 -14.951 59.263 1.00 32.14 C
ATOM 7 C4' A B1313 57.854 -16.331 59.417 1.00 32.17 C
ATOM 8 O4' A B1313 57.735 -16.979 58.146 1.00 32.24 O
ATOM 9 C3' A B1313 58.647 -17.308 60.207 1.00 32.26 C
ATOM 10 O3' A B1313 58.573 -17.069 61.576 1.00 32.21 O
ATOM 11 C2' A B1313 58.025 -18.619 59.797 1.00 32.31 C
ATOM 12 O2' A B1313 56.800 -18.816 60.465 1.00 32.23 O
ATOM 13 C1' A B1313 57.733 -18.363 58.335 1.00 32.32 C
ATOM 14 N9 A B1313 58.748 -18.944 57.465 1.00 32.47 N
ATOM 15 C8 A B1313 59.729 -18.362 56.718 1.00 32.53 C
ATOM 16 N7 A B1313 60.391 -19.214 56.026 1.00 32.68 N
ATOM 17 C5 A B1313 59.838 -20.403 56.367 1.00 32.71 C
ATOM 18 C6 A B1313 60.121 -21.689 55.998 1.00 32.86 C
ATOM 19 N6 A B1313 61.075 -22.000 55.143 1.00 33.01 N
ATOM 20 N1 A B1313 59.371 -22.658 56.540 1.00 32.87 N
ATOM 21 C2 A B1313 58.363 -22.384 57.394 1.00 32.73 C
ATOM 22 N3 A B1313 57.982 -21.195 57.816 1.00 32.58 N
ATOM 23 C4 A B1313 58.807 -20.268 57.259 1.00 32.58 C
ATOM 24 P G B1314 59.912 -16.845 62.423 1.00 32.59 P
ATOM 25 OP1 G B1314 59.485 -16.699 63.821 1.00 32.54 O
ATOM 26 OP2 G B1314 60.682 -15.728 61.791 1.00 32.59 O
ATOM 27 O5' G B1314 60.661 -18.235 62.195 1.00 32.74 O
TER
Atoms:
OP1: (57.904,-28.979,67.901)
OP2: (58.552,-30.354,65.817)
C3': (59.330,-25.094,65.080)
C1': (60.739,-25.774,63.363)
C5': (60.064,-26.944,66.662)
O4': (60.940,-26.562,64.486)
C8: (59.824,-27.929,62.555)
O2': (60.779,-23.557,64.053)
C6: (58.896,-27.654,59.281)
C5: (59.298,-27.582,60.584)
C4: (59.798,-26.390,61.036)
P: (58.897,-29.301,66.818)
C4': (60.443,-25.904,65.644)
C2': (59.909,-24.606,63.785)
C2: (59.498,-25.442,59.114)
N1: (59.025,-26.528,58.545)
N3: (59.914,-25.275,60.345)
N6: (58.404,-28.791,58.778)
N7: (59.308,-28.560,61.529)
N9: (60.113,-26.609,62.341)
O5': (59.349,-27.984,66.039)
O3': (58.927,-24.055,65.925)
OP2: (58.552,-30.354,65.817)
C3': (59.330,-25.094,65.080)
C1': (60.739,-25.774,63.363)
C5': (60.064,-26.944,66.662)
O4': (60.940,-26.562,64.486)
C8: (59.824,-27.929,62.555)
O2': (60.779,-23.557,64.053)
C6: (58.896,-27.654,59.281)
C5: (59.298,-27.582,60.584)
C4: (59.798,-26.390,61.036)
P: (58.897,-29.301,66.818)
C4': (60.443,-25.904,65.644)
C2': (59.909,-24.606,63.785)
C2: (59.498,-25.442,59.114)
N1: (59.025,-26.528,58.545)
N3: (59.914,-25.275,60.345)
N6: (58.404,-28.791,58.778)
N7: (59.308,-28.560,61.529)
N9: (60.113,-26.609,62.341)
O5': (59.349,-27.984,66.039)
O3': (58.927,-24.055,65.925)
OP1: (60.129,-12.709,59.566)
OP2: (62.101,-14.066,58.594)
C3': (58.647,-17.308,60.207)
C1': (57.733,-18.363,58.335)
C5': (58.442,-14.951,59.263)
O4': (57.735,-16.979,58.146)
C8: (59.729,-18.362,56.718)
O2': (56.800,-18.816,60.465)
C6: (60.121,-21.689,55.998)
C5: (59.838,-20.403,56.367)
C4: (58.807,-20.268,57.259)
P: (60.590,-13.660,58.567)
C4': (57.854,-16.331,59.417)
C2': (58.025,-18.619,59.797)
C2: (58.363,-22.384,57.394)
N1: (59.371,-22.658,56.540)
N3: (57.982,-21.195,57.816)
N6: (61.075,-22.000,55.143)
N7: (60.391,-19.214,56.026)
N9: (58.748,-18.944,57.465)
O5': (59.675,-14.955,58.564)
O3': (58.573,-17.069,61.576)
OP2: (62.101,-14.066,58.594)
C3': (58.647,-17.308,60.207)
C1': (57.733,-18.363,58.335)
C5': (58.442,-14.951,59.263)
O4': (57.735,-16.979,58.146)
C8: (59.729,-18.362,56.718)
O2': (56.800,-18.816,60.465)
C6: (60.121,-21.689,55.998)
C5: (59.838,-20.403,56.367)
C4: (58.807,-20.268,57.259)
P: (60.590,-13.660,58.567)
C4': (57.854,-16.331,59.417)
C2': (58.025,-18.619,59.797)
C2: (58.363,-22.384,57.394)
N1: (59.371,-22.658,56.540)
N3: (57.982,-21.195,57.816)
N6: (61.075,-22.000,55.143)
N7: (60.391,-19.214,56.026)
N9: (58.748,-18.944,57.465)
O5': (59.675,-14.955,58.564)
O3': (58.573,-17.069,61.576)
Image (generated by PyMOL):