ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:0972:9100

Extra

PDB:
ATOM 1 O3' A A 971 47.938 59.723 109.750 1.00 48.77 O
ATOM 2 P A A 972 47.693 59.745 108.167 1.00 48.92 P
ATOM 3 OP1 A A 972 46.309 59.263 107.896 1.00 49.00 O
ATOM 4 OP2 A A 972 48.852 59.058 107.527 1.00 46.81 O
ATOM 5 O5' A A 972 47.758 61.300 107.830 1.00 46.67 O
ATOM 6 C5' A A 972 46.558 62.057 107.617 1.00 43.44 C
ATOM 7 C4' A A 972 45.973 62.495 108.934 1.00 41.50 C
ATOM 8 O4' A A 972 46.985 63.170 109.716 1.00 41.99 O
ATOM 9 C3' A A 972 44.860 63.512 108.796 1.00 41.74 C
ATOM 10 O3' A A 972 43.622 62.879 108.531 1.00 43.21 O
ATOM 11 C2' A A 972 44.903 64.236 110.131 1.00 41.57 C
ATOM 12 O2' A A 972 44.281 63.526 111.180 1.00 41.23 O
ATOM 13 C1' A A 972 46.411 64.287 110.380 1.00 42.79 C
ATOM 14 N9 A A 972 47.037 65.501 109.851 1.00 43.65 N
ATOM 15 C8 A A 972 48.002 65.589 108.880 1.00 42.68 C
ATOM 16 N7 A A 972 48.370 66.813 108.611 1.00 43.66 N
ATOM 17 C5 A A 972 47.596 67.592 109.461 1.00 43.66 C
ATOM 18 C6 A A 972 47.514 68.984 109.665 1.00 43.33 C
ATOM 19 N6 A A 972 48.239 69.880 108.990 1.00 41.61 N
ATOM 20 N1 A A 972 46.646 69.430 110.596 1.00 43.94 N
ATOM 21 C2 A A 972 45.913 68.538 111.268 1.00 44.57 C
ATOM 22 N3 A A 972 45.895 67.213 111.164 1.00 45.61 N
ATOM 23 C4 A A 972 46.771 66.797 110.232 1.00 44.15 C
ATOM 24 P A A 973 42.819 63.241 107.192 1.00 44.23 P
ATOM 25 OP1 A A 973 41.616 62.367 107.177 1.00 44.09 O
ATOM 26 OP2 A A 973 43.773 63.183 106.058 1.00 42.45 O
ATOM 27 O5' A A 973 42.374 64.758 107.426 1.00 41.10 O
TER

ATOM 1 O3' G B 99 31.255 66.677 109.982 1.00 44.18 O
ATOM 2 P G B 100 31.890 65.339 110.575 1.00 45.02 P
ATOM 3 OP1 G B 100 31.256 64.215 109.842 1.00 47.40 O
ATOM 4 OP2 G B 100 31.824 65.393 112.054 1.00 43.35 O
ATOM 5 O5' G B 100 33.421 65.417 110.145 1.00 47.09 O
ATOM 6 C5' G B 100 34.416 64.578 110.772 1.00 44.82 C
ATOM 7 C4' G B 100 35.783 64.858 110.191 1.00 42.80 C
ATOM 8 O4' G B 100 36.132 66.253 110.393 1.00 39.85 O
ATOM 9 C3' G B 100 36.922 64.095 110.842 1.00 42.58 C
ATOM 10 O3' G B 100 37.028 62.784 110.296 1.00 45.71 O
ATOM 11 C2' G B 100 38.118 64.969 110.502 1.00 40.62 C
ATOM 12 O2' G B 100 38.512 64.821 109.158 1.00 39.69 O
ATOM 13 C1' G B 100 37.517 66.363 110.660 1.00 39.45 C
ATOM 14 N9 G B 100 37.677 66.904 112.004 1.00 39.47 N
ATOM 15 C8 G B 100 36.681 67.164 112.915 1.00 40.22 C
ATOM 16 N7 G B 100 37.127 67.657 114.038 1.00 39.56 N
ATOM 17 C5 G B 100 38.501 67.726 113.861 1.00 39.33 C
ATOM 18 C6 G B 100 39.518 68.187 114.739 1.00 39.94 C
ATOM 19 O6 G B 100 39.401 68.643 115.885 1.00 35.70 O
ATOM 20 N1 G B 100 40.779 68.082 114.155 1.00 41.26 N
ATOM 21 C2 G B 100 41.030 67.595 112.891 1.00 41.53 C
ATOM 22 N2 G B 100 42.316 67.577 112.503 1.00 41.82 N
ATOM 23 N3 G B 100 40.088 67.161 112.067 1.00 39.60 N
ATOM 24 C4 G B 100 38.858 67.258 112.611 1.00 39.16 C
ATOM 25 P G B 101 37.356 61.540 111.260 1.00 48.41 P
ATOM 26 OP1 G B 101 37.740 60.388 110.396 1.00 47.88 O
ATOM 27 OP2 G B 101 36.253 61.382 112.241 1.00 48.43 O
ATOM 28 O5' G B 101 38.656 62.005 112.048 1.00 47.27 O
TER

Atoms:
OP1: (46.309,59.263,107.896)
OP2: (48.852,59.058,107.527)
C3': (44.860,63.512,108.796)
C1': (46.411,64.287,110.380)
C5': (46.558,62.057,107.617)
O4': (46.985,63.170,109.716)
C8: (48.002,65.589,108.880)
O2': (44.281,63.526,111.180)
C6: (47.514,68.984,109.665)
C5: (47.596,67.592,109.461)
C4: (46.771,66.797,110.232)
P: (47.693,59.745,108.167)
C4': (45.973,62.495,108.934)
C2': (44.903,64.236,110.131)
C2: (45.913,68.538,111.268)
N1: (46.646,69.430,110.596)
N3: (45.895,67.213,111.164)
N6: (48.239,69.880,108.990)
N7: (48.370,66.813,108.611)
N9: (47.037,65.501,109.851)
O5': (47.758,61.300,107.830)
O3': (43.622,62.879,108.531)
OP1: (31.256,64.215,109.842)
OP2: (31.824,65.393,112.054)
C3': (36.922,64.095,110.842)
C1': (37.517,66.363,110.660)
C5': (34.416,64.578,110.772)
O6: (39.401,68.643,115.885)
O4': (36.132,66.253,110.393)
C8: (36.681,67.164,112.915)
C2: (41.030,67.595,112.891)
C6: (39.518,68.187,114.739)
C5: (38.501,67.726,113.861)
C4: (38.858,67.258,112.611)
P: (31.890,65.339,110.575)
C4': (35.783,64.858,110.191)
C2': (38.118,64.969,110.502)
O2': (38.512,64.821,109.158)
N1: (40.779,68.082,114.155)
N2: (42.316,67.577,112.503)
N3: (40.088,67.161,112.067)
N7: (37.127,67.657,114.038)
N9: (37.677,66.904,112.004)
O5': (33.421,65.417,110.145)
O3': (37.028,62.784,110.296)
Image (generated by PyMOL):
PyMOL image
show in jmol