ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2EES:A20:A49

Extra

PDB:
ATOM 1 O3' U A 19 -45.596 -16.956 16.171 1.00 17.71 O
ATOM 2 P A A 20 -46.684 -16.225 17.095 1.00 16.16 P
ATOM 3 OP1 A A 20 -46.378 -16.638 18.545 1.00 16.66 O
ATOM 4 OP2 A A 20 -47.998 -16.491 16.578 1.00 15.47 O
ATOM 5 O5' A A 20 -46.397 -14.673 16.903 1.00 15.08 O
ATOM 6 C5' A A 20 -45.136 -14.098 17.256 1.00 14.53 C
ATOM 7 C4' A A 20 -45.267 -12.552 17.125 1.00 15.83 C
ATOM 8 O4' A A 20 -45.126 -12.218 15.725 1.00 15.33 O
ATOM 9 C3' A A 20 -46.634 -11.992 17.578 1.00 15.24 C
ATOM 10 O3' A A 20 -46.444 -10.712 18.206 1.00 16.62 O
ATOM 11 C2' A A 20 -47.413 -11.866 16.254 1.00 17.09 C
ATOM 12 O2' A A 20 -48.303 -10.745 16.242 1.00 19.25 O
ATOM 13 C1' A A 20 -46.286 -11.615 15.228 1.00 16.85 C
ATOM 14 N9 A A 20 -46.559 -12.241 13.938 1.00 15.54 N
ATOM 15 C8 A A 20 -46.278 -13.532 13.562 1.00 16.32 C
ATOM 16 N7 A A 20 -46.694 -13.833 12.342 1.00 15.71 N
ATOM 17 C5 A A 20 -47.278 -12.659 11.894 1.00 15.98 C
ATOM 18 C6 A A 20 -47.874 -12.323 10.674 1.00 16.00 C
ATOM 19 N6 A A 20 -48.010 -13.207 9.668 1.00 17.34 N
ATOM 20 N1 A A 20 -48.333 -11.048 10.524 1.00 16.30 N
ATOM 21 C2 A A 20 -48.176 -10.178 11.531 1.00 17.82 C
ATOM 22 N3 A A 20 -47.584 -10.378 12.761 1.00 15.21 N
ATOM 23 C4 A A 20 -47.175 -11.657 12.855 1.00 15.49 C
ATOM 24 P U A 21 -46.502 -10.574 19.820 1.00 17.16 P
ATOM 25 OP1 U A 21 -47.713 -11.252 20.216 1.00 16.46 O
ATOM 26 OP2 U A 21 -46.302 -9.074 20.179 1.00 17.66 O
ATOM 27 O5' U A 21 -45.279 -11.449 20.297 1.00 15.08 O
TER

ATOM 1 O3' U B 48 -51.430 -21.830 9.748 1.00 37.07 O
ATOM 2 P A B 49 -50.301 -22.985 9.752 1.00 38.26 P
ATOM 3 OP1 A B 49 -50.647 -24.311 10.180 1.00 36.75 O
ATOM 4 OP2 A B 49 -49.341 -22.209 10.560 1.00 38.95 O
ATOM 5 O5' A B 49 -49.730 -23.041 8.273 1.00 35.24 O
ATOM 6 C5' A B 49 -48.378 -23.387 8.086 1.00 29.90 C
ATOM 7 C4' A B 49 -47.810 -22.727 6.867 1.00 27.25 C
ATOM 8 O4' A B 49 -47.975 -21.258 6.908 1.00 25.86 O
ATOM 9 C3' A B 49 -46.313 -22.999 6.828 1.00 25.85 C
ATOM 10 O3' A B 49 -46.122 -24.178 6.009 1.00 25.02 O
ATOM 11 C2' A B 49 -45.782 -21.735 6.166 1.00 24.04 C
ATOM 12 O2' A B 49 -46.001 -21.863 4.750 1.00 24.21 O
ATOM 13 C1' A B 49 -46.716 -20.646 6.740 1.00 22.96 C
ATOM 14 N9 A B 49 -46.406 -19.948 8.002 1.00 19.72 N
ATOM 15 C8 A B 49 -45.959 -20.484 9.175 1.00 18.72 C
ATOM 16 N7 A B 49 -45.863 -19.594 10.161 1.00 18.26 N
ATOM 17 C5 A B 49 -46.284 -18.398 9.589 1.00 17.02 C
ATOM 18 C6 A B 49 -46.444 -17.083 10.112 1.00 18.20 C
ATOM 19 N6 A B 49 -46.175 -16.734 11.395 1.00 15.74 N
ATOM 20 N1 A B 49 -46.874 -16.118 9.270 1.00 17.28 N
ATOM 21 C2 A B 49 -47.088 -16.444 7.991 1.00 18.46 C
ATOM 22 N3 A B 49 -46.974 -17.645 7.398 1.00 17.43 N
ATOM 23 C4 A B 49 -46.577 -18.588 8.249 1.00 18.23 C
ATOM 24 P A B 50 -44.889 -25.155 6.267 1.00 24.42 P
ATOM 25 OP1 A B 50 -45.014 -26.323 5.283 1.00 26.52 O
ATOM 26 OP2 A B 50 -44.581 -25.414 7.701 1.00 24.39 O
ATOM 27 O5' A B 50 -43.647 -24.295 5.719 1.00 20.45 O
TER

Atoms:
OP1: (-46.378,-16.638,18.545)
OP2: (-47.998,-16.491,16.578)
C3': (-46.634,-11.992,17.578)
C1': (-46.286,-11.615,15.228)
C5': (-45.136,-14.098,17.256)
O4': (-45.126,-12.218,15.725)
C8: (-46.278,-13.532,13.562)
O2': (-48.303,-10.745,16.242)
C6: (-47.874,-12.323,10.674)
C5: (-47.278,-12.659,11.894)
C4: (-47.175,-11.657,12.855)
P: (-46.684,-16.225,17.095)
C4': (-45.267,-12.552,17.125)
C2': (-47.413,-11.866,16.254)
C2: (-48.176,-10.178,11.531)
N1: (-48.333,-11.048,10.524)
N3: (-47.584,-10.378,12.761)
N6: (-48.010,-13.207,9.668)
N7: (-46.694,-13.833,12.342)
N9: (-46.559,-12.241,13.938)
O5': (-46.397,-14.673,16.903)
O3': (-46.444,-10.712,18.206)
OP1: (-50.647,-24.311,10.180)
OP2: (-49.341,-22.209,10.560)
C3': (-46.313,-22.999,6.828)
C1': (-46.716,-20.646,6.740)
C5': (-48.378,-23.387,8.086)
O4': (-47.975,-21.258,6.908)
C8: (-45.959,-20.484,9.175)
O2': (-46.001,-21.863,4.750)
C6: (-46.444,-17.083,10.112)
C5: (-46.284,-18.398,9.589)
C4: (-46.577,-18.588,8.249)
P: (-50.301,-22.985,9.752)
C4': (-47.810,-22.727,6.867)
C2': (-45.782,-21.735,6.166)
C2: (-47.088,-16.444,7.991)
N1: (-46.874,-16.118,9.270)
N3: (-46.974,-17.645,7.398)
N6: (-46.175,-16.734,11.395)
N7: (-45.863,-19.594,10.161)
N9: (-46.406,-19.948,8.002)
O5': (-49.730,-23.041,8.273)
O3': (-46.122,-24.178,6.009)
Image (generated by PyMOL):
PyMOL image
show in jmol