Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1256:A1581
Extra
PDB:
ATOM 1 O3' U A1255 30.853 -44.008 0.155 1.00 51.88 O
ATOM 2 P A A1256 31.971 -44.555 -0.871 1.00 42.20 P
ATOM 3 OP1 A A1256 33.248 -44.247 -0.170 1.00 61.42 O
ATOM 4 OP2 A A1256 31.801 -44.111 -2.283 1.00 34.87 O
ATOM 5 O5' A A1256 31.676 -46.140 -0.903 1.00 43.74 O
ATOM 6 C5' A A1256 30.396 -46.636 -1.332 1.00 47.98 C
ATOM 7 C4' A A1256 30.360 -48.158 -1.450 1.00 45.78 C
ATOM 8 O4' A A1256 29.103 -48.622 -0.889 1.00 46.13 O
ATOM 9 C3' A A1256 30.388 -48.712 -2.878 1.00 48.12 C
ATOM 10 O3' A A1256 30.844 -50.070 -2.844 1.00 52.44 O
ATOM 11 C2' A A1256 28.911 -48.846 -3.225 1.00 46.47 C
ATOM 12 O2' A A1256 28.726 -49.842 -4.213 1.00 48.32 O
ATOM 13 C1' A A1256 28.345 -49.293 -1.878 1.00 46.07 C
ATOM 14 N9 A A1256 26.915 -49.090 -1.603 1.00 49.25 N
ATOM 15 C8 A A1256 26.122 -50.012 -0.971 1.00 51.36 C
ATOM 16 N7 A A1256 24.898 -49.606 -0.761 1.00 50.19 N
ATOM 17 C5 A A1256 24.872 -48.333 -1.301 1.00 47.54 C
ATOM 18 C6 A A1256 23.864 -47.366 -1.373 1.00 48.83 C
ATOM 19 N6 A A1256 22.643 -47.503 -0.832 1.00 53.00 N
ATOM 20 N1 A A1256 24.151 -46.222 -2.003 1.00 44.11 N
ATOM 21 C2 A A1256 25.372 -46.052 -2.494 1.00 44.40 C
ATOM 22 N3 A A1256 26.410 -46.869 -2.465 1.00 47.81 N
ATOM 23 C4 A A1256 26.096 -48.009 -1.848 1.00 47.45 C
ATOM 24 P A A1257 32.319 -50.453 -3.335 1.00 53.77 P
ATOM 25 OP1 A A1257 33.227 -49.977 -2.256 1.00 58.06 O
ATOM 26 OP2 A A1257 32.511 -49.977 -4.732 1.00 52.21 O
ATOM 27 O5' A A1257 32.282 -52.046 -3.353 1.00 46.34 O
TER
ATOM 1 O3' C B1580 15.613 -52.760 5.665 1.00 51.63 O
ATOM 2 P A B1581 15.712 -54.035 4.711 1.00 55.56 P
ATOM 3 OP1 A B1581 14.415 -54.774 4.810 1.00 61.27 O
ATOM 4 OP2 A B1581 16.988 -54.728 5.065 1.00 56.30 O
ATOM 5 O5' A B1581 15.835 -53.365 3.262 1.00 52.86 O
ATOM 6 C5' A B1581 14.801 -52.512 2.762 1.00 50.38 C
ATOM 7 C4' A B1581 15.070 -52.123 1.332 1.00 42.49 C
ATOM 8 O4' A B1581 16.019 -51.036 1.282 1.00 44.62 O
ATOM 9 C3' A B1581 15.658 -53.182 0.423 1.00 40.43 C
ATOM 10 O3' A B1581 14.668 -54.064 -0.078 1.00 40.47 O
ATOM 11 C2' A B1581 16.283 -52.341 -0.683 1.00 45.11 C
ATOM 12 O2' A B1581 15.344 -51.916 -1.646 1.00 48.31 O
ATOM 13 C1' A B1581 16.778 -51.119 0.086 1.00 47.28 C
ATOM 14 N9 A B1581 18.202 -51.230 0.423 1.00 51.97 N
ATOM 15 C8 A B1581 18.771 -51.841 1.517 1.00 53.74 C
ATOM 16 N7 A B1581 20.083 -51.827 1.511 1.00 54.49 N
ATOM 17 C5 A B1581 20.403 -51.152 0.346 1.00 53.78 C
ATOM 18 C6 A B1581 21.633 -50.807 -0.230 1.00 55.64 C
ATOM 19 N6 A B1581 22.813 -51.107 0.314 1.00 51.73 N
ATOM 20 N1 A B1581 21.613 -50.127 -1.396 1.00 54.89 N
ATOM 21 C2 A B1581 20.429 -49.815 -1.935 1.00 55.12 C
ATOM 22 N3 A B1581 19.200 -50.083 -1.487 1.00 57.09 N
ATOM 23 C4 A B1581 19.257 -50.764 -0.330 1.00 52.95 C
ATOM 24 P G B1582 14.977 -55.647 -0.196 1.00 45.49 P
ATOM 25 OP1 G B1582 13.885 -56.279 -0.955 1.00 39.60 O
ATOM 26 OP2 G B1582 15.297 -56.141 1.174 1.00 47.17 O
ATOM 27 O5' G B1582 16.268 -55.758 -1.124 1.00 52.17 O
TER
ATOM 2 P A A1256 31.971 -44.555 -0.871 1.00 42.20 P
ATOM 3 OP1 A A1256 33.248 -44.247 -0.170 1.00 61.42 O
ATOM 4 OP2 A A1256 31.801 -44.111 -2.283 1.00 34.87 O
ATOM 5 O5' A A1256 31.676 -46.140 -0.903 1.00 43.74 O
ATOM 6 C5' A A1256 30.396 -46.636 -1.332 1.00 47.98 C
ATOM 7 C4' A A1256 30.360 -48.158 -1.450 1.00 45.78 C
ATOM 8 O4' A A1256 29.103 -48.622 -0.889 1.00 46.13 O
ATOM 9 C3' A A1256 30.388 -48.712 -2.878 1.00 48.12 C
ATOM 10 O3' A A1256 30.844 -50.070 -2.844 1.00 52.44 O
ATOM 11 C2' A A1256 28.911 -48.846 -3.225 1.00 46.47 C
ATOM 12 O2' A A1256 28.726 -49.842 -4.213 1.00 48.32 O
ATOM 13 C1' A A1256 28.345 -49.293 -1.878 1.00 46.07 C
ATOM 14 N9 A A1256 26.915 -49.090 -1.603 1.00 49.25 N
ATOM 15 C8 A A1256 26.122 -50.012 -0.971 1.00 51.36 C
ATOM 16 N7 A A1256 24.898 -49.606 -0.761 1.00 50.19 N
ATOM 17 C5 A A1256 24.872 -48.333 -1.301 1.00 47.54 C
ATOM 18 C6 A A1256 23.864 -47.366 -1.373 1.00 48.83 C
ATOM 19 N6 A A1256 22.643 -47.503 -0.832 1.00 53.00 N
ATOM 20 N1 A A1256 24.151 -46.222 -2.003 1.00 44.11 N
ATOM 21 C2 A A1256 25.372 -46.052 -2.494 1.00 44.40 C
ATOM 22 N3 A A1256 26.410 -46.869 -2.465 1.00 47.81 N
ATOM 23 C4 A A1256 26.096 -48.009 -1.848 1.00 47.45 C
ATOM 24 P A A1257 32.319 -50.453 -3.335 1.00 53.77 P
ATOM 25 OP1 A A1257 33.227 -49.977 -2.256 1.00 58.06 O
ATOM 26 OP2 A A1257 32.511 -49.977 -4.732 1.00 52.21 O
ATOM 27 O5' A A1257 32.282 -52.046 -3.353 1.00 46.34 O
TER
ATOM 1 O3' C B1580 15.613 -52.760 5.665 1.00 51.63 O
ATOM 2 P A B1581 15.712 -54.035 4.711 1.00 55.56 P
ATOM 3 OP1 A B1581 14.415 -54.774 4.810 1.00 61.27 O
ATOM 4 OP2 A B1581 16.988 -54.728 5.065 1.00 56.30 O
ATOM 5 O5' A B1581 15.835 -53.365 3.262 1.00 52.86 O
ATOM 6 C5' A B1581 14.801 -52.512 2.762 1.00 50.38 C
ATOM 7 C4' A B1581 15.070 -52.123 1.332 1.00 42.49 C
ATOM 8 O4' A B1581 16.019 -51.036 1.282 1.00 44.62 O
ATOM 9 C3' A B1581 15.658 -53.182 0.423 1.00 40.43 C
ATOM 10 O3' A B1581 14.668 -54.064 -0.078 1.00 40.47 O
ATOM 11 C2' A B1581 16.283 -52.341 -0.683 1.00 45.11 C
ATOM 12 O2' A B1581 15.344 -51.916 -1.646 1.00 48.31 O
ATOM 13 C1' A B1581 16.778 -51.119 0.086 1.00 47.28 C
ATOM 14 N9 A B1581 18.202 -51.230 0.423 1.00 51.97 N
ATOM 15 C8 A B1581 18.771 -51.841 1.517 1.00 53.74 C
ATOM 16 N7 A B1581 20.083 -51.827 1.511 1.00 54.49 N
ATOM 17 C5 A B1581 20.403 -51.152 0.346 1.00 53.78 C
ATOM 18 C6 A B1581 21.633 -50.807 -0.230 1.00 55.64 C
ATOM 19 N6 A B1581 22.813 -51.107 0.314 1.00 51.73 N
ATOM 20 N1 A B1581 21.613 -50.127 -1.396 1.00 54.89 N
ATOM 21 C2 A B1581 20.429 -49.815 -1.935 1.00 55.12 C
ATOM 22 N3 A B1581 19.200 -50.083 -1.487 1.00 57.09 N
ATOM 23 C4 A B1581 19.257 -50.764 -0.330 1.00 52.95 C
ATOM 24 P G B1582 14.977 -55.647 -0.196 1.00 45.49 P
ATOM 25 OP1 G B1582 13.885 -56.279 -0.955 1.00 39.60 O
ATOM 26 OP2 G B1582 15.297 -56.141 1.174 1.00 47.17 O
ATOM 27 O5' G B1582 16.268 -55.758 -1.124 1.00 52.17 O
TER
Atoms:
OP1: (33.248,-44.247,-0.170)
OP2: (31.801,-44.111,-2.283)
C3': (30.388,-48.712,-2.878)
C1': (28.345,-49.293,-1.878)
C5': (30.396,-46.636,-1.332)
O4': (29.103,-48.622,-0.889)
C8: (26.122,-50.012,-0.971)
O2': (28.726,-49.842,-4.213)
C6: (23.864,-47.366,-1.373)
C5: (24.872,-48.333,-1.301)
C4: (26.096,-48.009,-1.848)
P: (31.971,-44.555,-0.871)
C4': (30.360,-48.158,-1.450)
C2': (28.911,-48.846,-3.225)
C2: (25.372,-46.052,-2.494)
N1: (24.151,-46.222,-2.003)
N3: (26.410,-46.869,-2.465)
N6: (22.643,-47.503,-0.832)
N7: (24.898,-49.606,-0.761)
N9: (26.915,-49.090,-1.603)
O5': (31.676,-46.140,-0.903)
O3': (30.844,-50.070,-2.844)
OP2: (31.801,-44.111,-2.283)
C3': (30.388,-48.712,-2.878)
C1': (28.345,-49.293,-1.878)
C5': (30.396,-46.636,-1.332)
O4': (29.103,-48.622,-0.889)
C8: (26.122,-50.012,-0.971)
O2': (28.726,-49.842,-4.213)
C6: (23.864,-47.366,-1.373)
C5: (24.872,-48.333,-1.301)
C4: (26.096,-48.009,-1.848)
P: (31.971,-44.555,-0.871)
C4': (30.360,-48.158,-1.450)
C2': (28.911,-48.846,-3.225)
C2: (25.372,-46.052,-2.494)
N1: (24.151,-46.222,-2.003)
N3: (26.410,-46.869,-2.465)
N6: (22.643,-47.503,-0.832)
N7: (24.898,-49.606,-0.761)
N9: (26.915,-49.090,-1.603)
O5': (31.676,-46.140,-0.903)
O3': (30.844,-50.070,-2.844)
OP1: (14.415,-54.774,4.810)
OP2: (16.988,-54.728,5.065)
C3': (15.658,-53.182,0.423)
C1': (16.778,-51.119,0.086)
C5': (14.801,-52.512,2.762)
O4': (16.019,-51.036,1.282)
C8: (18.771,-51.841,1.517)
O2': (15.344,-51.916,-1.646)
C6: (21.633,-50.807,-0.230)
C5: (20.403,-51.152,0.346)
C4: (19.257,-50.764,-0.330)
P: (15.712,-54.035,4.711)
C4': (15.070,-52.123,1.332)
C2': (16.283,-52.341,-0.683)
C2: (20.429,-49.815,-1.935)
N1: (21.613,-50.127,-1.396)
N3: (19.200,-50.083,-1.487)
N6: (22.813,-51.107,0.314)
N7: (20.083,-51.827,1.511)
N9: (18.202,-51.230,0.423)
O5': (15.835,-53.365,3.262)
O3': (14.668,-54.064,-0.078)
OP2: (16.988,-54.728,5.065)
C3': (15.658,-53.182,0.423)
C1': (16.778,-51.119,0.086)
C5': (14.801,-52.512,2.762)
O4': (16.019,-51.036,1.282)
C8: (18.771,-51.841,1.517)
O2': (15.344,-51.916,-1.646)
C6: (21.633,-50.807,-0.230)
C5: (20.403,-51.152,0.346)
C4: (19.257,-50.764,-0.330)
P: (15.712,-54.035,4.711)
C4': (15.070,-52.123,1.332)
C2': (16.283,-52.341,-0.683)
C2: (20.429,-49.815,-1.935)
N1: (21.613,-50.127,-1.396)
N3: (19.200,-50.083,-1.487)
N6: (22.813,-51.107,0.314)
N7: (20.083,-51.827,1.511)
N9: (18.202,-51.230,0.423)
O5': (15.835,-53.365,3.262)
O3': (14.668,-54.064,-0.078)
Image (generated by PyMOL):