ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:51062:51319

Extra

PDB:
ATOM 1 O3' U A1061 118.360 -28.778 229.439 1.00 42.08 O
ATOM 2 P A A1062 119.405 -27.905 230.316 1.00 41.72 P
ATOM 3 OP1 A A1062 120.429 -27.359 229.389 1.00 41.59 O
ATOM 4 OP2 A A1062 119.847 -28.752 231.443 1.00 41.67 O
ATOM 5 O5' A A1062 118.503 -26.703 230.832 1.00 41.55 O
ATOM 6 C5' A A1062 118.052 -25.728 229.923 1.00 41.55 C
ATOM 7 C4' A A1062 117.496 -24.543 230.633 1.00 41.33 C
ATOM 8 O4' A A1062 116.609 -24.971 231.685 1.00 41.41 O
ATOM 9 C3' A A1062 118.497 -23.654 231.326 1.00 40.94 C
ATOM 10 O3' A A1062 119.149 -22.769 230.416 1.00 40.81 O
ATOM 11 C2' A A1062 117.627 -22.955 232.365 1.00 40.83 C
ATOM 12 O2' A A1062 116.867 -21.935 231.755 1.00 40.85 O
ATOM 13 C1' A A1062 116.666 -24.073 232.754 1.00 41.12 C
ATOM 14 N9 A A1062 117.096 -24.835 233.939 1.00 41.05 N
ATOM 15 C8 A A1062 117.466 -26.126 233.878 1.00 41.23 C
ATOM 16 N7 A A1062 117.759 -26.642 235.023 1.00 41.16 N
ATOM 17 C5 A A1062 117.537 -25.654 235.909 1.00 40.92 C
ATOM 18 C6 A A1062 117.665 -25.621 237.274 1.00 40.77 C
ATOM 19 N6 A A1062 118.056 -26.627 238.013 1.00 40.83 N
ATOM 20 N1 A A1062 117.353 -24.495 237.868 1.00 40.56 N
ATOM 21 C2 A A1062 116.963 -23.459 237.155 1.00 40.51 C
ATOM 22 N3 A A1062 116.801 -23.380 235.846 1.00 40.65 N
ATOM 23 C4 A A1062 117.117 -24.534 235.270 1.00 40.85 C
ATOM 24 P G A1063 120.686 -22.373 230.616 1.00 35.17 P
ATOM 25 OP1 G A1063 121.052 -21.390 229.597 1.00 35.09 O
ATOM 26 OP2 G A1063 121.419 -23.596 230.663 1.00 35.27 O
ATOM 27 O5' G A1063 120.685 -21.681 232.046 1.00 34.88 O
TER

ATOM 1 O3' U B1318 115.757 -10.786 237.289 1.00 31.97 O
ATOM 2 P A B1319 115.538 -11.491 235.911 1.00 37.15 P
ATOM 3 OP1 A B1319 116.049 -10.610 234.848 1.00 37.08 O
ATOM 4 OP2 A B1319 114.198 -11.821 235.922 1.00 37.41 O
ATOM 5 O5' A B1319 116.432 -12.794 236.002 1.00 37.15 O
ATOM 6 C5' A B1319 117.814 -12.726 235.684 1.00 36.96 C
ATOM 7 C4' A B1319 118.504 -14.037 235.903 1.00 36.99 C
ATOM 8 O4' A B1319 118.294 -14.493 237.248 1.00 36.95 O
ATOM 9 C3' A B1319 117.981 -15.165 235.099 1.00 37.29 C
ATOM 10 O3' A B1319 118.358 -15.099 233.763 1.00 37.36 O
ATOM 11 C2' A B1319 118.496 -16.375 235.835 1.00 37.30 C
ATOM 12 O2' A B1319 119.816 -16.643 235.471 1.00 37.18 O
ATOM 13 C1' A B1319 118.471 -15.889 237.279 1.00 37.10 C
ATOM 14 N9 A B1319 117.369 -16.481 238.017 1.00 37.28 N
ATOM 15 C8 A B1319 116.276 -15.857 238.472 1.00 37.33 C
ATOM 16 N7 A B1319 115.466 -16.669 239.060 1.00 37.52 N
ATOM 17 C5 A B1319 116.078 -17.896 238.987 1.00 37.60 C
ATOM 18 C6 A B1319 115.707 -19.151 239.457 1.00 37.80 C
ATOM 19 N6 A B1319 114.546 -19.341 240.133 1.00 37.97 N
ATOM 20 N1 A B1319 116.581 -20.165 239.221 1.00 37.83 N
ATOM 21 C2 A B1319 117.717 -19.962 238.558 1.00 37.68 C
ATOM 22 N3 A B1319 118.166 -18.803 238.091 1.00 37.48 N
ATOM 23 C4 A B1319 117.278 -17.807 238.339 1.00 37.45 C
ATOM 24 P G B1320 117.210 -15.116 232.657 1.00 30.87 P
ATOM 25 OP1 G B1320 117.886 -15.206 231.329 1.00 30.94 O
ATOM 26 OP2 G B1320 116.295 -13.974 232.933 1.00 30.84 O
ATOM 27 O5' G B1320 116.471 -16.473 232.993 1.00 31.13 O
TER

Atoms:
OP1: (120.429,-27.359,229.389)
OP2: (119.847,-28.752,231.443)
C3': (118.497,-23.654,231.326)
C1': (116.666,-24.073,232.754)
C5': (118.052,-25.728,229.923)
O4': (116.609,-24.971,231.685)
C8: (117.466,-26.126,233.878)
O2': (116.867,-21.935,231.755)
C6: (117.665,-25.621,237.274)
C5: (117.537,-25.654,235.909)
C4: (117.117,-24.534,235.270)
P: (119.405,-27.905,230.316)
C4': (117.496,-24.543,230.633)
C2': (117.627,-22.955,232.365)
C2: (116.963,-23.459,237.155)
N1: (117.353,-24.495,237.868)
N3: (116.801,-23.380,235.846)
N6: (118.056,-26.627,238.013)
N7: (117.759,-26.642,235.023)
N9: (117.096,-24.835,233.939)
O5': (118.503,-26.703,230.832)
O3': (119.149,-22.769,230.416)
OP1: (116.049,-10.610,234.848)
OP2: (114.198,-11.821,235.922)
C3': (117.981,-15.165,235.099)
C1': (118.471,-15.889,237.279)
C5': (117.814,-12.726,235.684)
O4': (118.294,-14.493,237.248)
C8: (116.276,-15.857,238.472)
O2': (119.816,-16.643,235.471)
C6: (115.707,-19.151,239.457)
C5: (116.078,-17.896,238.987)
C4: (117.278,-17.807,238.339)
P: (115.538,-11.491,235.911)
C4': (118.504,-14.037,235.903)
C2': (118.496,-16.375,235.835)
C2: (117.717,-19.962,238.558)
N1: (116.581,-20.165,239.221)
N3: (118.166,-18.803,238.091)
N6: (114.546,-19.341,240.133)
N7: (115.466,-16.669,239.060)
N9: (117.369,-16.481,238.017)
O5': (116.432,-12.794,236.002)
O3': (118.358,-15.099,233.763)
Image (generated by PyMOL):
PyMOL image
show in jmol