ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1MMS:C14:C18

Extra

PDB:
ATOM 1 O3' C A 13 -1.921 17.088 -17.565 1.00 35.84 O
ATOM 2 P U A 14 -2.537 16.339 -18.853 1.00 31.56 P
ATOM 3 OP1 U A 14 -3.011 17.398 -19.774 1.00 46.70 O
ATOM 4 OP2 U A 14 -3.488 15.293 -18.407 1.00 29.35 O
ATOM 5 O5' U A 14 -1.266 15.617 -19.495 1.00 22.04 O
ATOM 6 C5' U A 14 -0.138 16.392 -19.935 1.00 25.90 C
ATOM 7 C4' U A 14 1.022 15.492 -20.286 1.00 32.86 C
ATOM 8 O4' U A 14 1.493 14.818 -19.094 1.00 35.71 O
ATOM 9 C3' U A 14 0.721 14.374 -21.270 1.00 35.55 C
ATOM 10 O3' U A 14 0.799 14.834 -22.609 1.00 37.39 O
ATOM 11 C2' U A 14 1.793 13.340 -20.939 1.00 36.11 C
ATOM 12 O2' U A 14 3.047 13.612 -21.536 1.00 27.98 O
ATOM 13 C1' U A 14 1.917 13.505 -19.423 1.00 33.40 C
ATOM 14 N1 U A 14 1.088 12.543 -18.676 1.00 17.15 N
ATOM 15 C2 U A 14 1.653 11.323 -18.364 1.00 21.75 C
ATOM 16 O2 U A 14 2.789 11.015 -18.700 1.00 24.53 O
ATOM 17 N3 U A 14 0.841 10.472 -17.652 1.00 12.86 N
ATOM 18 C4 U A 14 -0.454 10.708 -17.245 1.00 22.54 C
ATOM 19 O4 U A 14 -1.068 9.829 -16.631 1.00 33.30 O
ATOM 20 C5 U A 14 -0.972 11.988 -17.617 1.00 18.28 C
ATOM 21 C6 U A 14 -0.202 12.840 -18.300 1.00 12.72 C
ATOM 22 P U A 15 -0.290 14.345 -23.688 1.00 38.85 P
ATOM 23 OP1 U A 15 0.064 15.034 -24.964 1.00 40.95 O
ATOM 24 OP2 U A 15 -1.664 14.499 -23.126 1.00 18.29 O
ATOM 25 O5' U A 15 0.014 12.790 -23.851 1.00 36.40 O
TER

ATOM 1 O3' G B 17 -2.586 4.140 -18.752 1.00 40.54 O
ATOM 2 P A B 18 -2.674 5.408 -17.758 1.00 35.85 P
ATOM 3 OP1 A B 18 -3.551 5.029 -16.625 1.00 34.69 O
ATOM 4 OP2 A B 18 -2.982 6.639 -18.536 1.00 34.22 O
ATOM 5 O5' A B 18 -1.186 5.532 -17.220 1.00 22.83 O
ATOM 6 C5' A B 18 -0.570 4.437 -16.545 1.00 16.26 C
ATOM 7 C4' A B 18 0.859 4.768 -16.237 1.00 21.94 C
ATOM 8 O4' A B 18 1.694 4.585 -17.417 1.00 35.64 O
ATOM 9 C3' A B 18 1.093 6.209 -15.768 1.00 37.69 C
ATOM 10 O3' A B 18 2.058 6.196 -14.714 1.00 40.68 O
ATOM 11 C2' A B 18 1.737 6.855 -16.996 1.00 39.67 C
ATOM 12 O2' A B 18 2.583 7.960 -16.731 1.00 43.60 O
ATOM 13 C1' A B 18 2.567 5.680 -17.491 1.00 37.65 C
ATOM 14 N9 A B 18 3.223 5.772 -18.793 1.00 33.82 N
ATOM 15 C8 A B 18 2.972 6.600 -19.858 1.00 28.66 C
ATOM 16 N7 A B 18 3.878 6.527 -20.805 1.00 37.91 N
ATOM 17 C5 A B 18 4.758 5.554 -20.349 1.00 34.14 C
ATOM 18 C6 A B 18 5.949 5.022 -20.886 1.00 38.86 C
ATOM 19 N6 A B 18 6.490 5.420 -22.038 1.00 44.62 N
ATOM 20 N1 A B 18 6.577 4.054 -20.180 1.00 40.40 N
ATOM 21 C2 A B 18 6.041 3.661 -19.017 1.00 35.55 C
ATOM 22 N3 A B 18 4.939 4.093 -18.408 1.00 28.51 N
ATOM 23 C4 A B 18 4.342 5.053 -19.133 1.00 31.82 C
ATOM 24 P A B 19 1.715 6.875 -13.302 1.00 33.11 P
ATOM 25 OP1 A B 19 0.734 7.989 -13.469 1.00 18.52 O
ATOM 26 OP2 A B 19 3.039 7.134 -12.680 1.00 18.08 O
ATOM 27 O5' A B 19 0.968 5.723 -12.497 1.00 30.46 O
TER

Atoms:
C4: (-0.454,10.708,-17.245)
N3: (0.841,10.472,-17.652)
OP1: (-3.011,17.398,-19.774)
OP2: (-3.488,15.293,-18.407)
C2: (1.653,11.323,-18.364)
C1': (1.917,13.505,-19.423)
C3': (0.721,14.374,-21.270)
O5': (-1.266,15.617,-19.495)
O4': (1.493,14.818,-19.094)
C5': (-0.138,16.392,-19.935)
P: (-2.537,16.339,-18.853)
C4': (1.022,15.492,-20.286)
C2': (1.793,13.340,-20.939)
O2': (3.047,13.612,-21.536)
N1: (1.088,12.543,-18.676)
O4: (-1.068,9.829,-16.631)
O2: (2.789,11.015,-18.700)
C6: (-0.202,12.840,-18.300)
C5: (-0.972,11.988,-17.617)
O3': (0.799,14.834,-22.609)
OP1: (-3.551,5.029,-16.625)
OP2: (-2.982,6.639,-18.536)
C3': (1.093,6.209,-15.768)
C1': (2.567,5.680,-17.491)
C5': (-0.570,4.437,-16.545)
O4': (1.694,4.585,-17.417)
C8: (2.972,6.600,-19.858)
O2': (2.583,7.960,-16.731)
C6: (5.949,5.022,-20.886)
C5: (4.758,5.554,-20.349)
C4: (4.342,5.053,-19.133)
P: (-2.674,5.408,-17.758)
C4': (0.859,4.768,-16.237)
C2': (1.737,6.855,-16.996)
C2: (6.041,3.661,-19.017)
N1: (6.577,4.054,-20.180)
N3: (4.939,4.093,-18.408)
N6: (6.490,5.420,-22.038)
N7: (3.878,6.527,-20.805)
N9: (3.223,5.772,-18.793)
O5': (-1.186,5.532,-17.220)
O3': (2.058,6.196,-14.714)
Image (generated by PyMOL):
PyMOL image
show in jmol