Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIO:X41:X49
Extra
PDB:
ATOM 1 O3' C A 40 -4.473 54.905 1.742 1.00 44.85 O
ATOM 2 P A A 41 -4.447 53.504 2.517 1.00 42.09 P
ATOM 3 OP1 A A 41 -3.099 52.926 2.318 1.00 42.57 O
ATOM 4 OP2 A A 41 -5.650 52.725 2.133 1.00 41.44 O
ATOM 5 O5' A A 41 -4.617 53.959 4.043 1.00 39.78 O
ATOM 6 C5' A A 41 -3.486 54.312 4.838 1.00 36.29 C
ATOM 7 C4' A A 41 -3.436 53.436 6.077 1.00 33.72 C
ATOM 8 O4' A A 41 -4.692 53.549 6.789 1.00 32.54 O
ATOM 9 C3' A A 41 -3.230 51.942 5.801 1.00 32.46 C
ATOM 10 O3' A A 41 -2.135 51.427 6.557 1.00 31.59 O
ATOM 11 C2' A A 41 -4.554 51.311 6.221 1.00 31.90 C
ATOM 12 O2' A A 41 -4.402 50.003 6.733 1.00 32.22 O
ATOM 13 C1' A A 41 -5.009 52.278 7.309 1.00 31.23 C
ATOM 14 N9 A A 41 -6.433 52.209 7.638 1.00 30.34 N
ATOM 15 C8 A A 41 -7.491 52.254 6.766 1.00 30.18 C
ATOM 16 N7 A A 41 -8.667 52.161 7.341 1.00 29.93 N
ATOM 17 C5 A A 41 -8.362 52.050 8.691 1.00 29.91 C
ATOM 18 C6 A A 41 -9.169 51.916 9.841 1.00 29.41 C
ATOM 19 N6 A A 41 -10.503 51.879 9.790 1.00 29.86 N
ATOM 20 N1 A A 41 -8.553 51.824 11.043 1.00 29.35 N
ATOM 21 C2 A A 41 -7.213 51.868 11.092 1.00 28.97 C
ATOM 22 N3 A A 41 -6.351 51.990 10.081 1.00 29.24 N
ATOM 23 C4 A A 41 -6.989 52.075 8.895 1.00 29.86 C
ATOM 24 P G A 42 -0.626 51.640 6.066 1.00 30.59 P
ATOM 25 OP1 G A 42 -0.187 52.999 6.460 1.00 30.99 O
ATOM 26 OP2 G A 42 -0.560 51.230 4.646 1.00 31.03 O
ATOM 27 O5' G A 42 0.179 50.570 6.946 1.00 29.96 O
TER
ATOM 1 O3' G B 48 -16.321 46.902 0.344 1.00 38.59 O
ATOM 2 P A B 49 -16.853 48.386 0.638 1.00 39.96 P
ATOM 3 OP1 A B 49 -18.208 48.495 0.051 1.00 40.33 O
ATOM 4 OP2 A B 49 -15.812 49.374 0.256 1.00 39.38 O
ATOM 5 O5' A B 49 -16.977 48.393 2.232 1.00 40.07 O
ATOM 6 C5' A B 49 -17.894 47.520 2.889 1.00 40.89 C
ATOM 7 C4' A B 49 -17.811 47.695 4.392 1.00 41.35 C
ATOM 8 O4' A B 49 -16.513 47.248 4.865 1.00 40.96 O
ATOM 9 C3' A B 49 -17.890 49.138 4.865 1.00 42.12 C
ATOM 10 O3' A B 49 -19.237 49.603 4.929 1.00 44.17 O
ATOM 11 C2' A B 49 -17.203 49.055 6.226 1.00 41.23 C
ATOM 12 O2' A B 49 -18.007 48.478 7.240 1.00 41.11 O
ATOM 13 C1' A B 49 -16.040 48.134 5.871 1.00 39.94 C
ATOM 14 N9 A B 49 -14.838 48.836 5.403 1.00 38.53 N
ATOM 15 C8 A B 49 -14.397 48.965 4.114 1.00 37.98 C
ATOM 16 N7 A B 49 -13.283 49.645 3.994 1.00 37.85 N
ATOM 17 C5 A B 49 -12.964 49.988 5.298 1.00 37.65 C
ATOM 18 C6 A B 49 -11.889 50.713 5.859 1.00 37.22 C
ATOM 19 N6 A B 49 -10.903 51.241 5.129 1.00 37.66 N
ATOM 20 N1 A B 49 -11.869 50.882 7.202 1.00 37.22 N
ATOM 21 C2 A B 49 -12.860 50.351 7.935 1.00 37.02 C
ATOM 22 N3 A B 49 -13.915 49.646 7.521 1.00 37.14 N
ATOM 23 C4 A B 49 -13.912 49.498 6.181 1.00 37.73 C
ATOM 24 P A B 50 -19.575 51.109 4.489 1.00 45.83 P
ATOM 25 OP1 A B 50 -21.037 51.280 4.642 1.00 46.40 O
ATOM 26 OP2 A B 50 -18.940 51.409 3.186 1.00 45.14 O
ATOM 27 O5' A B 50 -18.814 51.997 5.586 1.00 46.66 O
TER
ATOM 2 P A A 41 -4.447 53.504 2.517 1.00 42.09 P
ATOM 3 OP1 A A 41 -3.099 52.926 2.318 1.00 42.57 O
ATOM 4 OP2 A A 41 -5.650 52.725 2.133 1.00 41.44 O
ATOM 5 O5' A A 41 -4.617 53.959 4.043 1.00 39.78 O
ATOM 6 C5' A A 41 -3.486 54.312 4.838 1.00 36.29 C
ATOM 7 C4' A A 41 -3.436 53.436 6.077 1.00 33.72 C
ATOM 8 O4' A A 41 -4.692 53.549 6.789 1.00 32.54 O
ATOM 9 C3' A A 41 -3.230 51.942 5.801 1.00 32.46 C
ATOM 10 O3' A A 41 -2.135 51.427 6.557 1.00 31.59 O
ATOM 11 C2' A A 41 -4.554 51.311 6.221 1.00 31.90 C
ATOM 12 O2' A A 41 -4.402 50.003 6.733 1.00 32.22 O
ATOM 13 C1' A A 41 -5.009 52.278 7.309 1.00 31.23 C
ATOM 14 N9 A A 41 -6.433 52.209 7.638 1.00 30.34 N
ATOM 15 C8 A A 41 -7.491 52.254 6.766 1.00 30.18 C
ATOM 16 N7 A A 41 -8.667 52.161 7.341 1.00 29.93 N
ATOM 17 C5 A A 41 -8.362 52.050 8.691 1.00 29.91 C
ATOM 18 C6 A A 41 -9.169 51.916 9.841 1.00 29.41 C
ATOM 19 N6 A A 41 -10.503 51.879 9.790 1.00 29.86 N
ATOM 20 N1 A A 41 -8.553 51.824 11.043 1.00 29.35 N
ATOM 21 C2 A A 41 -7.213 51.868 11.092 1.00 28.97 C
ATOM 22 N3 A A 41 -6.351 51.990 10.081 1.00 29.24 N
ATOM 23 C4 A A 41 -6.989 52.075 8.895 1.00 29.86 C
ATOM 24 P G A 42 -0.626 51.640 6.066 1.00 30.59 P
ATOM 25 OP1 G A 42 -0.187 52.999 6.460 1.00 30.99 O
ATOM 26 OP2 G A 42 -0.560 51.230 4.646 1.00 31.03 O
ATOM 27 O5' G A 42 0.179 50.570 6.946 1.00 29.96 O
TER
ATOM 1 O3' G B 48 -16.321 46.902 0.344 1.00 38.59 O
ATOM 2 P A B 49 -16.853 48.386 0.638 1.00 39.96 P
ATOM 3 OP1 A B 49 -18.208 48.495 0.051 1.00 40.33 O
ATOM 4 OP2 A B 49 -15.812 49.374 0.256 1.00 39.38 O
ATOM 5 O5' A B 49 -16.977 48.393 2.232 1.00 40.07 O
ATOM 6 C5' A B 49 -17.894 47.520 2.889 1.00 40.89 C
ATOM 7 C4' A B 49 -17.811 47.695 4.392 1.00 41.35 C
ATOM 8 O4' A B 49 -16.513 47.248 4.865 1.00 40.96 O
ATOM 9 C3' A B 49 -17.890 49.138 4.865 1.00 42.12 C
ATOM 10 O3' A B 49 -19.237 49.603 4.929 1.00 44.17 O
ATOM 11 C2' A B 49 -17.203 49.055 6.226 1.00 41.23 C
ATOM 12 O2' A B 49 -18.007 48.478 7.240 1.00 41.11 O
ATOM 13 C1' A B 49 -16.040 48.134 5.871 1.00 39.94 C
ATOM 14 N9 A B 49 -14.838 48.836 5.403 1.00 38.53 N
ATOM 15 C8 A B 49 -14.397 48.965 4.114 1.00 37.98 C
ATOM 16 N7 A B 49 -13.283 49.645 3.994 1.00 37.85 N
ATOM 17 C5 A B 49 -12.964 49.988 5.298 1.00 37.65 C
ATOM 18 C6 A B 49 -11.889 50.713 5.859 1.00 37.22 C
ATOM 19 N6 A B 49 -10.903 51.241 5.129 1.00 37.66 N
ATOM 20 N1 A B 49 -11.869 50.882 7.202 1.00 37.22 N
ATOM 21 C2 A B 49 -12.860 50.351 7.935 1.00 37.02 C
ATOM 22 N3 A B 49 -13.915 49.646 7.521 1.00 37.14 N
ATOM 23 C4 A B 49 -13.912 49.498 6.181 1.00 37.73 C
ATOM 24 P A B 50 -19.575 51.109 4.489 1.00 45.83 P
ATOM 25 OP1 A B 50 -21.037 51.280 4.642 1.00 46.40 O
ATOM 26 OP2 A B 50 -18.940 51.409 3.186 1.00 45.14 O
ATOM 27 O5' A B 50 -18.814 51.997 5.586 1.00 46.66 O
TER
Atoms:
OP1: (-3.099,52.926,2.318)
OP2: (-5.650,52.725,2.133)
C3': (-3.230,51.942,5.801)
C1': (-5.009,52.278,7.309)
C5': (-3.486,54.312,4.838)
O4': (-4.692,53.549,6.789)
C8: (-7.491,52.254,6.766)
O2': (-4.402,50.003,6.733)
C6: (-9.169,51.916,9.841)
C5: (-8.362,52.050,8.691)
C4: (-6.989,52.075,8.895)
P: (-4.447,53.504,2.517)
C4': (-3.436,53.436,6.077)
C2': (-4.554,51.311,6.221)
C2: (-7.213,51.868,11.092)
N1: (-8.553,51.824,11.043)
N3: (-6.351,51.990,10.081)
N6: (-10.503,51.879,9.790)
N7: (-8.667,52.161,7.341)
N9: (-6.433,52.209,7.638)
O5': (-4.617,53.959,4.043)
O3': (-2.135,51.427,6.557)
OP2: (-5.650,52.725,2.133)
C3': (-3.230,51.942,5.801)
C1': (-5.009,52.278,7.309)
C5': (-3.486,54.312,4.838)
O4': (-4.692,53.549,6.789)
C8: (-7.491,52.254,6.766)
O2': (-4.402,50.003,6.733)
C6: (-9.169,51.916,9.841)
C5: (-8.362,52.050,8.691)
C4: (-6.989,52.075,8.895)
P: (-4.447,53.504,2.517)
C4': (-3.436,53.436,6.077)
C2': (-4.554,51.311,6.221)
C2: (-7.213,51.868,11.092)
N1: (-8.553,51.824,11.043)
N3: (-6.351,51.990,10.081)
N6: (-10.503,51.879,9.790)
N7: (-8.667,52.161,7.341)
N9: (-6.433,52.209,7.638)
O5': (-4.617,53.959,4.043)
O3': (-2.135,51.427,6.557)
OP1: (-18.208,48.495,0.051)
OP2: (-15.812,49.374,0.256)
C3': (-17.890,49.138,4.865)
C1': (-16.040,48.134,5.871)
C5': (-17.894,47.520,2.889)
O4': (-16.513,47.248,4.865)
C8: (-14.397,48.965,4.114)
O2': (-18.007,48.478,7.240)
C6: (-11.889,50.713,5.859)
C5: (-12.964,49.988,5.298)
C4: (-13.912,49.498,6.181)
P: (-16.853,48.386,0.638)
C4': (-17.811,47.695,4.392)
C2': (-17.203,49.055,6.226)
C2: (-12.860,50.351,7.935)
N1: (-11.869,50.882,7.202)
N3: (-13.915,49.646,7.521)
N6: (-10.903,51.241,5.129)
N7: (-13.283,49.645,3.994)
N9: (-14.838,48.836,5.403)
O5': (-16.977,48.393,2.232)
O3': (-19.237,49.603,4.929)
OP2: (-15.812,49.374,0.256)
C3': (-17.890,49.138,4.865)
C1': (-16.040,48.134,5.871)
C5': (-17.894,47.520,2.889)
O4': (-16.513,47.248,4.865)
C8: (-14.397,48.965,4.114)
O2': (-18.007,48.478,7.240)
C6: (-11.889,50.713,5.859)
C5: (-12.964,49.988,5.298)
C4: (-13.912,49.498,6.181)
P: (-16.853,48.386,0.638)
C4': (-17.811,47.695,4.392)
C2': (-17.203,49.055,6.226)
C2: (-12.860,50.351,7.935)
N1: (-11.869,50.882,7.202)
N3: (-13.915,49.646,7.521)
N6: (-10.903,51.241,5.129)
N7: (-13.283,49.645,3.994)
N9: (-14.838,48.836,5.403)
O5': (-16.977,48.393,2.232)
O3': (-19.237,49.603,4.929)
Image (generated by PyMOL):