Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GOT:A20:A49
Extra
PDB:
ATOM 1 O3' U A 19 -45.156 -15.655 16.770 1.00 29.65 O
ATOM 2 P A A 20 -46.269 -15.002 17.734 1.00 30.06 P
ATOM 3 OP1 A A 20 -45.821 -15.404 19.111 1.00 30.01 O
ATOM 4 OP2 A A 20 -47.641 -15.289 17.293 1.00 29.56 O
ATOM 5 O5' A A 20 -46.011 -13.462 17.513 1.00 27.22 O
ATOM 6 C5' A A 20 -44.828 -12.849 17.992 1.00 26.43 C
ATOM 7 C4' A A 20 -44.926 -11.357 17.783 1.00 25.73 C
ATOM 8 O4' A A 20 -44.768 -11.082 16.369 1.00 26.88 O
ATOM 9 C3' A A 20 -46.242 -10.728 18.187 1.00 26.16 C
ATOM 10 O3' A A 20 -45.940 -9.491 18.769 1.00 25.68 O
ATOM 11 C2' A A 20 -47.018 -10.628 16.864 1.00 26.35 C
ATOM 12 O2' A A 20 -47.963 -9.571 16.755 1.00 25.75 O
ATOM 13 C1' A A 20 -45.899 -10.402 15.854 1.00 25.71 C
ATOM 14 N9 A A 20 -46.237 -11.026 14.568 1.00 27.34 N
ATOM 15 C8 A A 20 -45.952 -12.327 14.201 1.00 28.68 C
ATOM 16 N7 A A 20 -46.404 -12.662 13.003 1.00 28.19 N
ATOM 17 C5 A A 20 -47.024 -11.510 12.555 1.00 29.24 C
ATOM 18 C6 A A 20 -47.701 -11.220 11.368 1.00 28.64 C
ATOM 19 N6 A A 20 -47.890 -12.124 10.384 1.00 29.39 N
ATOM 20 N1 A A 20 -48.177 -9.959 11.213 1.00 30.63 N
ATOM 21 C2 A A 20 -47.974 -9.056 12.203 1.00 31.51 C
ATOM 22 N3 A A 20 -47.355 -9.217 13.382 1.00 29.21 N
ATOM 23 C4 A A 20 -46.906 -10.478 13.503 1.00 29.21 C
ATOM 24 P U A 21 -46.008 -9.345 20.380 1.00 27.02 P
ATOM 25 OP1 U A 21 -47.279 -9.981 20.757 1.00 25.60 O
ATOM 26 OP2 U A 21 -45.813 -7.892 20.643 1.00 27.77 O
ATOM 27 O5' U A 21 -44.764 -10.176 20.923 1.00 25.70 O
TER
ATOM 1 O3' U B 48 -51.257 -20.423 10.694 1.00 49.42 O
ATOM 2 P A B 49 -50.108 -21.526 10.491 1.00 51.34 P
ATOM 3 OP1 A B 49 -50.664 -22.875 10.659 1.00 51.13 O
ATOM 4 OP2 A B 49 -48.914 -21.136 11.297 1.00 52.09 O
ATOM 5 O5' A B 49 -49.712 -21.418 8.953 1.00 49.92 O
ATOM 6 C5' A B 49 -48.510 -22.009 8.520 1.00 45.96 C
ATOM 7 C4' A B 49 -47.887 -21.238 7.383 1.00 44.14 C
ATOM 8 O4' A B 49 -48.047 -19.796 7.521 1.00 42.37 O
ATOM 9 C3' A B 49 -46.391 -21.478 7.329 1.00 42.99 C
ATOM 10 O3' A B 49 -46.176 -22.709 6.646 1.00 42.78 O
ATOM 11 C2' A B 49 -45.884 -20.211 6.643 1.00 41.34 C
ATOM 12 O2' A B 49 -46.029 -20.225 5.221 1.00 40.70 O
ATOM 13 C1' A B 49 -46.806 -19.148 7.265 1.00 40.50 C
ATOM 14 N9 A B 49 -46.377 -18.533 8.527 1.00 38.29 N
ATOM 15 C8 A B 49 -45.846 -19.140 9.640 1.00 36.29 C
ATOM 16 N7 A B 49 -45.688 -18.326 10.665 1.00 36.98 N
ATOM 17 C5 A B 49 -46.128 -17.099 10.191 1.00 36.69 C
ATOM 18 C6 A B 49 -46.259 -15.836 10.805 1.00 37.22 C
ATOM 19 N6 A B 49 -45.973 -15.590 12.099 1.00 35.22 N
ATOM 20 N1 A B 49 -46.719 -14.816 10.043 1.00 38.34 N
ATOM 21 C2 A B 49 -47.040 -15.068 8.759 1.00 38.44 C
ATOM 22 N3 A B 49 -46.979 -16.218 8.082 1.00 37.09 N
ATOM 23 C4 A B 49 -46.513 -17.202 8.860 1.00 36.99 C
ATOM 24 P A B 50 -44.822 -23.537 6.887 1.00 43.77 P
ATOM 25 OP1 A B 50 -44.851 -24.770 6.035 1.00 45.05 O
ATOM 26 OP2 A B 50 -44.606 -23.680 8.354 1.00 45.05 O
ATOM 27 O5' A B 50 -43.716 -22.593 6.236 1.00 41.51 O
TER
ATOM 2 P A A 20 -46.269 -15.002 17.734 1.00 30.06 P
ATOM 3 OP1 A A 20 -45.821 -15.404 19.111 1.00 30.01 O
ATOM 4 OP2 A A 20 -47.641 -15.289 17.293 1.00 29.56 O
ATOM 5 O5' A A 20 -46.011 -13.462 17.513 1.00 27.22 O
ATOM 6 C5' A A 20 -44.828 -12.849 17.992 1.00 26.43 C
ATOM 7 C4' A A 20 -44.926 -11.357 17.783 1.00 25.73 C
ATOM 8 O4' A A 20 -44.768 -11.082 16.369 1.00 26.88 O
ATOM 9 C3' A A 20 -46.242 -10.728 18.187 1.00 26.16 C
ATOM 10 O3' A A 20 -45.940 -9.491 18.769 1.00 25.68 O
ATOM 11 C2' A A 20 -47.018 -10.628 16.864 1.00 26.35 C
ATOM 12 O2' A A 20 -47.963 -9.571 16.755 1.00 25.75 O
ATOM 13 C1' A A 20 -45.899 -10.402 15.854 1.00 25.71 C
ATOM 14 N9 A A 20 -46.237 -11.026 14.568 1.00 27.34 N
ATOM 15 C8 A A 20 -45.952 -12.327 14.201 1.00 28.68 C
ATOM 16 N7 A A 20 -46.404 -12.662 13.003 1.00 28.19 N
ATOM 17 C5 A A 20 -47.024 -11.510 12.555 1.00 29.24 C
ATOM 18 C6 A A 20 -47.701 -11.220 11.368 1.00 28.64 C
ATOM 19 N6 A A 20 -47.890 -12.124 10.384 1.00 29.39 N
ATOM 20 N1 A A 20 -48.177 -9.959 11.213 1.00 30.63 N
ATOM 21 C2 A A 20 -47.974 -9.056 12.203 1.00 31.51 C
ATOM 22 N3 A A 20 -47.355 -9.217 13.382 1.00 29.21 N
ATOM 23 C4 A A 20 -46.906 -10.478 13.503 1.00 29.21 C
ATOM 24 P U A 21 -46.008 -9.345 20.380 1.00 27.02 P
ATOM 25 OP1 U A 21 -47.279 -9.981 20.757 1.00 25.60 O
ATOM 26 OP2 U A 21 -45.813 -7.892 20.643 1.00 27.77 O
ATOM 27 O5' U A 21 -44.764 -10.176 20.923 1.00 25.70 O
TER
ATOM 1 O3' U B 48 -51.257 -20.423 10.694 1.00 49.42 O
ATOM 2 P A B 49 -50.108 -21.526 10.491 1.00 51.34 P
ATOM 3 OP1 A B 49 -50.664 -22.875 10.659 1.00 51.13 O
ATOM 4 OP2 A B 49 -48.914 -21.136 11.297 1.00 52.09 O
ATOM 5 O5' A B 49 -49.712 -21.418 8.953 1.00 49.92 O
ATOM 6 C5' A B 49 -48.510 -22.009 8.520 1.00 45.96 C
ATOM 7 C4' A B 49 -47.887 -21.238 7.383 1.00 44.14 C
ATOM 8 O4' A B 49 -48.047 -19.796 7.521 1.00 42.37 O
ATOM 9 C3' A B 49 -46.391 -21.478 7.329 1.00 42.99 C
ATOM 10 O3' A B 49 -46.176 -22.709 6.646 1.00 42.78 O
ATOM 11 C2' A B 49 -45.884 -20.211 6.643 1.00 41.34 C
ATOM 12 O2' A B 49 -46.029 -20.225 5.221 1.00 40.70 O
ATOM 13 C1' A B 49 -46.806 -19.148 7.265 1.00 40.50 C
ATOM 14 N9 A B 49 -46.377 -18.533 8.527 1.00 38.29 N
ATOM 15 C8 A B 49 -45.846 -19.140 9.640 1.00 36.29 C
ATOM 16 N7 A B 49 -45.688 -18.326 10.665 1.00 36.98 N
ATOM 17 C5 A B 49 -46.128 -17.099 10.191 1.00 36.69 C
ATOM 18 C6 A B 49 -46.259 -15.836 10.805 1.00 37.22 C
ATOM 19 N6 A B 49 -45.973 -15.590 12.099 1.00 35.22 N
ATOM 20 N1 A B 49 -46.719 -14.816 10.043 1.00 38.34 N
ATOM 21 C2 A B 49 -47.040 -15.068 8.759 1.00 38.44 C
ATOM 22 N3 A B 49 -46.979 -16.218 8.082 1.00 37.09 N
ATOM 23 C4 A B 49 -46.513 -17.202 8.860 1.00 36.99 C
ATOM 24 P A B 50 -44.822 -23.537 6.887 1.00 43.77 P
ATOM 25 OP1 A B 50 -44.851 -24.770 6.035 1.00 45.05 O
ATOM 26 OP2 A B 50 -44.606 -23.680 8.354 1.00 45.05 O
ATOM 27 O5' A B 50 -43.716 -22.593 6.236 1.00 41.51 O
TER
Atoms:
OP1: (-45.821,-15.404,19.111)
OP2: (-47.641,-15.289,17.293)
C3': (-46.242,-10.728,18.187)
C1': (-45.899,-10.402,15.854)
C5': (-44.828,-12.849,17.992)
O4': (-44.768,-11.082,16.369)
C8: (-45.952,-12.327,14.201)
O2': (-47.963,-9.571,16.755)
C6: (-47.701,-11.220,11.368)
C5: (-47.024,-11.510,12.555)
C4: (-46.906,-10.478,13.503)
P: (-46.269,-15.002,17.734)
C4': (-44.926,-11.357,17.783)
C2': (-47.018,-10.628,16.864)
C2: (-47.974,-9.056,12.203)
N1: (-48.177,-9.959,11.213)
N3: (-47.355,-9.217,13.382)
N6: (-47.890,-12.124,10.384)
N7: (-46.404,-12.662,13.003)
N9: (-46.237,-11.026,14.568)
O5': (-46.011,-13.462,17.513)
O3': (-45.940,-9.491,18.769)
OP2: (-47.641,-15.289,17.293)
C3': (-46.242,-10.728,18.187)
C1': (-45.899,-10.402,15.854)
C5': (-44.828,-12.849,17.992)
O4': (-44.768,-11.082,16.369)
C8: (-45.952,-12.327,14.201)
O2': (-47.963,-9.571,16.755)
C6: (-47.701,-11.220,11.368)
C5: (-47.024,-11.510,12.555)
C4: (-46.906,-10.478,13.503)
P: (-46.269,-15.002,17.734)
C4': (-44.926,-11.357,17.783)
C2': (-47.018,-10.628,16.864)
C2: (-47.974,-9.056,12.203)
N1: (-48.177,-9.959,11.213)
N3: (-47.355,-9.217,13.382)
N6: (-47.890,-12.124,10.384)
N7: (-46.404,-12.662,13.003)
N9: (-46.237,-11.026,14.568)
O5': (-46.011,-13.462,17.513)
O3': (-45.940,-9.491,18.769)
OP1: (-50.664,-22.875,10.659)
OP2: (-48.914,-21.136,11.297)
C3': (-46.391,-21.478,7.329)
C1': (-46.806,-19.148,7.265)
C5': (-48.510,-22.009,8.520)
O4': (-48.047,-19.796,7.521)
C8: (-45.846,-19.140,9.640)
O2': (-46.029,-20.225,5.221)
C6: (-46.259,-15.836,10.805)
C5: (-46.128,-17.099,10.191)
C4: (-46.513,-17.202,8.860)
P: (-50.108,-21.526,10.491)
C4': (-47.887,-21.238,7.383)
C2': (-45.884,-20.211,6.643)
C2: (-47.040,-15.068,8.759)
N1: (-46.719,-14.816,10.043)
N3: (-46.979,-16.218,8.082)
N6: (-45.973,-15.590,12.099)
N7: (-45.688,-18.326,10.665)
N9: (-46.377,-18.533,8.527)
O5': (-49.712,-21.418,8.953)
O3': (-46.176,-22.709,6.646)
OP2: (-48.914,-21.136,11.297)
C3': (-46.391,-21.478,7.329)
C1': (-46.806,-19.148,7.265)
C5': (-48.510,-22.009,8.520)
O4': (-48.047,-19.796,7.521)
C8: (-45.846,-19.140,9.640)
O2': (-46.029,-20.225,5.221)
C6: (-46.259,-15.836,10.805)
C5: (-46.128,-17.099,10.191)
C4: (-46.513,-17.202,8.860)
P: (-50.108,-21.526,10.491)
C4': (-47.887,-21.238,7.383)
C2': (-45.884,-20.211,6.643)
C2: (-47.040,-15.068,8.759)
N1: (-46.719,-14.816,10.043)
N3: (-46.979,-16.218,8.082)
N6: (-45.973,-15.590,12.099)
N7: (-45.688,-18.326,10.665)
N9: (-46.377,-18.533,8.527)
O5': (-49.712,-21.418,8.953)
O3': (-46.176,-22.709,6.646)
Image (generated by PyMOL):