Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:99:910
Extra
PDB:
ATOM 1 O3' C A 8 51.487 41.937 98.747 1.00 53.17 O
ATOM 2 P C A 9 52.791 42.881 98.661 1.00 53.77 P
ATOM 3 OP1 C A 9 52.321 44.184 99.183 1.00 54.03 O
ATOM 4 OP2 C A 9 53.350 42.792 97.293 1.00 53.93 O
ATOM 5 O5' C A 9 53.874 42.261 99.662 1.00 51.72 O
ATOM 6 C5' C A 9 53.602 42.134 101.070 1.00 50.09 C
ATOM 7 C4' C A 9 54.602 41.201 101.737 1.00 50.32 C
ATOM 8 O4' C A 9 54.707 39.962 100.974 1.00 49.40 O
ATOM 9 C3' C A 9 56.034 41.696 101.929 1.00 49.41 C
ATOM 10 O3' C A 9 56.536 41.173 103.155 1.00 52.57 O
ATOM 11 C2' C A 9 56.773 41.040 100.770 1.00 48.48 C
ATOM 12 O2' C A 9 58.144 40.844 101.029 1.00 47.73 O
ATOM 13 C1' C A 9 56.064 39.694 100.686 1.00 47.54 C
ATOM 14 N1 C A 9 56.145 39.057 99.362 1.00 45.90 N
ATOM 15 C2 C A 9 56.853 37.849 99.225 1.00 46.20 C
ATOM 16 O2 C A 9 57.419 37.355 100.214 1.00 44.77 O
ATOM 17 N3 C A 9 56.911 37.257 98.013 1.00 46.59 N
ATOM 18 C4 C A 9 56.314 37.825 96.961 1.00 46.84 C
ATOM 19 N4 C A 9 56.402 37.203 95.781 1.00 49.15 N
ATOM 20 C5 C A 9 55.602 39.051 97.070 1.00 46.75 C
ATOM 21 C6 C A 9 55.541 39.627 98.276 1.00 46.29 C
ATOM 22 P A A 10 56.784 42.156 104.407 1.00 55.12 P
ATOM 23 OP1 A A 10 55.596 43.036 104.577 1.00 54.42 O
ATOM 24 OP2 A A 10 58.125 42.752 104.233 1.00 56.23 O
ATOM 25 O5' A A 10 56.881 41.192 105.668 1.00 56.16 O
TER
ATOM 1 O3' C B 9 56.536 41.173 103.155 1.00 52.57 O
ATOM 2 P A B 10 56.784 42.156 104.407 1.00 55.12 P
ATOM 3 OP1 A B 10 55.596 43.036 104.577 1.00 54.42 O
ATOM 4 OP2 A B 10 58.125 42.752 104.233 1.00 56.23 O
ATOM 5 O5' A B 10 56.881 41.192 105.668 1.00 56.16 O
ATOM 6 C5' A B 10 56.216 39.915 105.690 1.00 57.61 C
ATOM 7 C4' A B 10 56.224 39.360 107.089 1.00 58.51 C
ATOM 8 O4' A B 10 57.597 39.257 107.549 1.00 59.04 O
ATOM 9 C3' A B 10 55.561 40.258 108.113 1.00 59.76 C
ATOM 10 O3' A B 10 54.161 40.064 108.148 1.00 59.73 O
ATOM 11 C2' A B 10 56.245 39.835 109.401 1.00 60.68 C
ATOM 12 O2' A B 10 55.770 38.598 109.874 1.00 61.24 O
ATOM 13 C1' A B 10 57.678 39.643 108.913 1.00 61.40 C
ATOM 14 N9 A B 10 58.457 40.883 108.999 1.00 63.55 N
ATOM 15 C8 A B 10 58.852 41.710 107.975 1.00 63.73 C
ATOM 16 N7 A B 10 59.524 42.762 108.372 1.00 63.43 N
ATOM 17 C5 A B 10 59.581 42.619 109.750 1.00 63.58 C
ATOM 18 C6 A B 10 60.155 43.410 110.758 1.00 63.18 C
ATOM 19 N6 A B 10 60.800 44.549 110.527 1.00 63.04 N
ATOM 20 N1 A B 10 60.037 42.985 112.032 1.00 64.13 N
ATOM 21 C2 A B 10 59.380 41.845 112.269 1.00 64.53 C
ATOM 22 N3 A B 10 58.794 41.017 111.411 1.00 65.06 N
ATOM 23 C4 A B 10 58.932 41.465 110.151 1.00 64.23 C
ATOM 24 P C B 11 53.199 41.312 108.429 1.00 60.92 P
ATOM 25 OP1 C B 11 52.420 41.550 107.193 1.00 62.22 O
ATOM 26 OP2 C B 11 54.001 42.408 109.019 1.00 60.17 O
ATOM 27 O5' C B 11 52.190 40.781 109.538 1.00 63.73 O
TER
ATOM 2 P C A 9 52.791 42.881 98.661 1.00 53.77 P
ATOM 3 OP1 C A 9 52.321 44.184 99.183 1.00 54.03 O
ATOM 4 OP2 C A 9 53.350 42.792 97.293 1.00 53.93 O
ATOM 5 O5' C A 9 53.874 42.261 99.662 1.00 51.72 O
ATOM 6 C5' C A 9 53.602 42.134 101.070 1.00 50.09 C
ATOM 7 C4' C A 9 54.602 41.201 101.737 1.00 50.32 C
ATOM 8 O4' C A 9 54.707 39.962 100.974 1.00 49.40 O
ATOM 9 C3' C A 9 56.034 41.696 101.929 1.00 49.41 C
ATOM 10 O3' C A 9 56.536 41.173 103.155 1.00 52.57 O
ATOM 11 C2' C A 9 56.773 41.040 100.770 1.00 48.48 C
ATOM 12 O2' C A 9 58.144 40.844 101.029 1.00 47.73 O
ATOM 13 C1' C A 9 56.064 39.694 100.686 1.00 47.54 C
ATOM 14 N1 C A 9 56.145 39.057 99.362 1.00 45.90 N
ATOM 15 C2 C A 9 56.853 37.849 99.225 1.00 46.20 C
ATOM 16 O2 C A 9 57.419 37.355 100.214 1.00 44.77 O
ATOM 17 N3 C A 9 56.911 37.257 98.013 1.00 46.59 N
ATOM 18 C4 C A 9 56.314 37.825 96.961 1.00 46.84 C
ATOM 19 N4 C A 9 56.402 37.203 95.781 1.00 49.15 N
ATOM 20 C5 C A 9 55.602 39.051 97.070 1.00 46.75 C
ATOM 21 C6 C A 9 55.541 39.627 98.276 1.00 46.29 C
ATOM 22 P A A 10 56.784 42.156 104.407 1.00 55.12 P
ATOM 23 OP1 A A 10 55.596 43.036 104.577 1.00 54.42 O
ATOM 24 OP2 A A 10 58.125 42.752 104.233 1.00 56.23 O
ATOM 25 O5' A A 10 56.881 41.192 105.668 1.00 56.16 O
TER
ATOM 1 O3' C B 9 56.536 41.173 103.155 1.00 52.57 O
ATOM 2 P A B 10 56.784 42.156 104.407 1.00 55.12 P
ATOM 3 OP1 A B 10 55.596 43.036 104.577 1.00 54.42 O
ATOM 4 OP2 A B 10 58.125 42.752 104.233 1.00 56.23 O
ATOM 5 O5' A B 10 56.881 41.192 105.668 1.00 56.16 O
ATOM 6 C5' A B 10 56.216 39.915 105.690 1.00 57.61 C
ATOM 7 C4' A B 10 56.224 39.360 107.089 1.00 58.51 C
ATOM 8 O4' A B 10 57.597 39.257 107.549 1.00 59.04 O
ATOM 9 C3' A B 10 55.561 40.258 108.113 1.00 59.76 C
ATOM 10 O3' A B 10 54.161 40.064 108.148 1.00 59.73 O
ATOM 11 C2' A B 10 56.245 39.835 109.401 1.00 60.68 C
ATOM 12 O2' A B 10 55.770 38.598 109.874 1.00 61.24 O
ATOM 13 C1' A B 10 57.678 39.643 108.913 1.00 61.40 C
ATOM 14 N9 A B 10 58.457 40.883 108.999 1.00 63.55 N
ATOM 15 C8 A B 10 58.852 41.710 107.975 1.00 63.73 C
ATOM 16 N7 A B 10 59.524 42.762 108.372 1.00 63.43 N
ATOM 17 C5 A B 10 59.581 42.619 109.750 1.00 63.58 C
ATOM 18 C6 A B 10 60.155 43.410 110.758 1.00 63.18 C
ATOM 19 N6 A B 10 60.800 44.549 110.527 1.00 63.04 N
ATOM 20 N1 A B 10 60.037 42.985 112.032 1.00 64.13 N
ATOM 21 C2 A B 10 59.380 41.845 112.269 1.00 64.53 C
ATOM 22 N3 A B 10 58.794 41.017 111.411 1.00 65.06 N
ATOM 23 C4 A B 10 58.932 41.465 110.151 1.00 64.23 C
ATOM 24 P C B 11 53.199 41.312 108.429 1.00 60.92 P
ATOM 25 OP1 C B 11 52.420 41.550 107.193 1.00 62.22 O
ATOM 26 OP2 C B 11 54.001 42.408 109.019 1.00 60.17 O
ATOM 27 O5' C B 11 52.190 40.781 109.538 1.00 63.73 O
TER
Atoms:
C2: (56.853,37.849,99.225)
OP1: (52.321,44.184,99.183)
OP2: (53.350,42.792,97.293)
C4: (56.314,37.825,96.961)
O5': (53.874,42.261,99.662)
C3': (56.034,41.696,101.929)
C1': (56.064,39.694,100.686)
O4': (54.707,39.962,100.974)
C5': (53.602,42.134,101.070)
P: (52.791,42.881,98.661)
O2: (57.419,37.355,100.214)
C4': (54.602,41.201,101.737)
C2': (56.773,41.040,100.770)
O2': (58.144,40.844,101.029)
N1: (56.145,39.057,99.362)
N3: (56.911,37.257,98.013)
N4: (56.402,37.203,95.781)
C6: (55.541,39.627,98.276)
C5: (55.602,39.051,97.070)
O3': (56.536,41.173,103.155)
OP1: (52.321,44.184,99.183)
OP2: (53.350,42.792,97.293)
C4: (56.314,37.825,96.961)
O5': (53.874,42.261,99.662)
C3': (56.034,41.696,101.929)
C1': (56.064,39.694,100.686)
O4': (54.707,39.962,100.974)
C5': (53.602,42.134,101.070)
P: (52.791,42.881,98.661)
O2: (57.419,37.355,100.214)
C4': (54.602,41.201,101.737)
C2': (56.773,41.040,100.770)
O2': (58.144,40.844,101.029)
N1: (56.145,39.057,99.362)
N3: (56.911,37.257,98.013)
N4: (56.402,37.203,95.781)
C6: (55.541,39.627,98.276)
C5: (55.602,39.051,97.070)
O3': (56.536,41.173,103.155)
OP1: (55.596,43.036,104.577)
OP2: (58.125,42.752,104.233)
C3': (55.561,40.258,108.113)
C1': (57.678,39.643,108.913)
C5': (56.216,39.915,105.690)
O4': (57.597,39.257,107.549)
C8: (58.852,41.710,107.975)
O2': (55.770,38.598,109.874)
C6: (60.155,43.410,110.758)
C5: (59.581,42.619,109.750)
C4: (58.932,41.465,110.151)
P: (56.784,42.156,104.407)
C4': (56.224,39.360,107.089)
C2': (56.245,39.835,109.401)
C2: (59.380,41.845,112.269)
N1: (60.037,42.985,112.032)
N3: (58.794,41.017,111.411)
N6: (60.800,44.549,110.527)
N7: (59.524,42.762,108.372)
N9: (58.457,40.883,108.999)
O5': (56.881,41.192,105.668)
O3': (54.161,40.064,108.148)
OP2: (58.125,42.752,104.233)
C3': (55.561,40.258,108.113)
C1': (57.678,39.643,108.913)
C5': (56.216,39.915,105.690)
O4': (57.597,39.257,107.549)
C8: (58.852,41.710,107.975)
O2': (55.770,38.598,109.874)
C6: (60.155,43.410,110.758)
C5: (59.581,42.619,109.750)
C4: (58.932,41.465,110.151)
P: (56.784,42.156,104.407)
C4': (56.224,39.360,107.089)
C2': (56.245,39.835,109.401)
C2: (59.380,41.845,112.269)
N1: (60.037,42.985,112.032)
N3: (58.794,41.017,111.411)
N6: (60.800,44.549,110.527)
N7: (59.524,42.762,108.372)
N9: (58.457,40.883,108.999)
O5': (56.881,41.192,105.668)
O3': (54.161,40.064,108.148)
Image (generated by PyMOL):