ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:0448:0443

Extra

PDB:
ATOM 1 O3' A A 447 45.524 138.801 53.189 1.00 30.64 O
ATOM 2 P A A 448 44.083 138.111 53.019 1.00 32.36 P
ATOM 3 OP1 A A 448 43.374 138.182 54.318 1.00 31.13 O
ATOM 4 OP2 A A 448 44.242 136.799 52.341 1.00 30.29 O
ATOM 5 O5' A A 448 43.316 139.087 52.032 1.00 30.68 O
ATOM 6 C5' A A 448 43.710 139.193 50.668 1.00 30.96 C
ATOM 7 C4' A A 448 42.532 139.592 49.823 1.00 32.04 C
ATOM 8 O4' A A 448 41.579 138.502 49.761 1.00 33.00 O
ATOM 9 C3' A A 448 41.751 140.809 50.294 1.00 30.74 C
ATOM 10 O3' A A 448 41.298 141.495 49.144 1.00 31.44 O
ATOM 11 C2' A A 448 40.578 140.190 51.041 1.00 30.97 C
ATOM 12 O2' A A 448 39.435 141.009 51.030 1.00 30.19 O
ATOM 13 C1' A A 448 40.314 138.946 50.205 1.00 33.24 C
ATOM 14 N9 A A 448 39.692 137.848 50.941 1.00 35.29 N
ATOM 15 C8 A A 448 40.050 137.332 52.158 1.00 35.78 C
ATOM 16 N7 A A 448 39.331 136.304 52.527 1.00 37.64 N
ATOM 17 C5 A A 448 38.429 136.138 51.486 1.00 38.50 C
ATOM 18 C6 A A 448 37.401 135.204 51.263 1.00 39.10 C
ATOM 19 N6 A A 448 37.097 134.221 52.109 1.00 39.29 N
ATOM 20 N1 A A 448 36.688 135.315 50.123 1.00 39.08 N
ATOM 21 C2 A A 448 36.991 136.300 49.275 1.00 39.26 C
ATOM 22 N3 A A 448 37.933 137.236 49.372 1.00 39.41 N
ATOM 23 C4 A A 448 38.628 137.094 50.513 1.00 37.39 C
ATOM 24 P C A 449 42.148 142.730 48.582 1.00 30.98 P
ATOM 25 OP1 C A 449 41.429 143.294 47.412 1.00 31.93 O
ATOM 26 OP2 C A 449 43.556 142.302 48.442 1.00 29.66 O
ATOM 27 O5' C A 449 42.058 143.783 49.759 1.00 29.27 O
TER

ATOM 1 O3' U B 442 42.786 131.295 62.113 1.00 27.14 O
ATOM 2 P A B 443 43.534 130.605 60.872 1.00 26.80 P
ATOM 3 OP1 A B 443 44.340 129.486 61.399 1.00 26.77 O
ATOM 4 OP2 A B 443 44.188 131.640 60.051 1.00 26.61 O
ATOM 5 O5' A B 443 42.345 130.022 59.992 1.00 27.54 O
ATOM 6 C5' A B 443 41.546 128.923 60.451 1.00 26.50 C
ATOM 7 C4' A B 443 40.637 128.452 59.346 1.00 25.70 C
ATOM 8 O4' A B 443 39.672 129.487 59.051 1.00 25.49 O
ATOM 9 C3' A B 443 41.326 128.184 58.020 1.00 24.96 C
ATOM 10 O3' A B 443 41.868 126.872 57.988 1.00 24.16 O
ATOM 11 C2' A B 443 40.192 128.358 57.026 1.00 25.73 C
ATOM 12 O2' A B 443 39.362 127.216 56.973 1.00 27.54 O
ATOM 13 C1' A B 443 39.407 129.509 57.662 1.00 25.99 C
ATOM 14 N9 A B 443 39.734 130.844 57.155 1.00 27.00 N
ATOM 15 C8 A B 443 40.330 131.880 57.838 1.00 27.56 C
ATOM 16 N7 A B 443 40.469 132.972 57.129 1.00 26.37 N
ATOM 17 C5 A B 443 39.935 132.636 55.894 1.00 26.91 C
ATOM 18 C6 A B 443 39.784 133.363 54.712 1.00 26.61 C
ATOM 19 N6 A B 443 40.154 134.635 54.582 1.00 28.13 N
ATOM 20 N1 A B 443 39.227 132.736 53.656 1.00 25.83 N
ATOM 21 C2 A B 443 38.841 131.465 53.798 1.00 26.11 C
ATOM 22 N3 A B 443 38.920 130.676 54.859 1.00 26.63 N
ATOM 23 C4 A B 443 39.485 131.328 55.891 1.00 27.69 C
ATOM 24 P G B 444 43.338 126.636 57.404 1.00 24.99 P
ATOM 25 OP1 G B 444 43.585 125.179 57.404 1.00 24.73 O
ATOM 26 OP2 G B 444 44.267 127.532 58.127 1.00 24.31 O
ATOM 27 O5' G B 444 43.214 127.118 55.891 1.00 25.06 O
TER

Atoms:
OP1: (43.374,138.182,54.318)
OP2: (44.242,136.799,52.341)
C3': (41.751,140.809,50.294)
C1': (40.314,138.946,50.205)
C5': (43.710,139.193,50.668)
O4': (41.579,138.502,49.761)
C8: (40.050,137.332,52.158)
O2': (39.435,141.009,51.030)
C6: (37.401,135.204,51.263)
C5: (38.429,136.138,51.486)
C4: (38.628,137.094,50.513)
P: (44.083,138.111,53.019)
C4': (42.532,139.592,49.823)
C2': (40.578,140.190,51.041)
C2: (36.991,136.300,49.275)
N1: (36.688,135.315,50.123)
N3: (37.933,137.236,49.372)
N6: (37.097,134.221,52.109)
N7: (39.331,136.304,52.527)
N9: (39.692,137.848,50.941)
O5': (43.316,139.087,52.032)
O3': (41.298,141.495,49.144)
OP1: (44.340,129.486,61.399)
OP2: (44.188,131.640,60.051)
C3': (41.326,128.184,58.020)
C1': (39.407,129.509,57.662)
C5': (41.546,128.923,60.451)
O4': (39.672,129.487,59.051)
C8: (40.330,131.880,57.838)
O2': (39.362,127.216,56.973)
C6: (39.784,133.363,54.712)
C5: (39.935,132.636,55.894)
C4: (39.485,131.328,55.891)
P: (43.534,130.605,60.872)
C4': (40.637,128.452,59.346)
C2': (40.192,128.358,57.026)
C2: (38.841,131.465,53.798)
N1: (39.227,132.736,53.656)
N3: (38.920,130.676,54.859)
N6: (40.154,134.635,54.582)
N7: (40.469,132.972,57.129)
N9: (39.734,130.844,57.155)
O5': (42.345,130.022,59.992)
O3': (41.868,126.872,57.988)
Image (generated by PyMOL):
PyMOL image
show in jmol