Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01877:01878
Extra
PDB:
ATOM 1 O3' U A1876 93.684 74.732 33.737 1.00 74.49 O
ATOM 2 P A A1877 93.845 73.999 32.317 1.00 74.77 P
ATOM 3 OP1 A A1877 92.499 73.981 31.682 1.00 73.89 O
ATOM 4 OP2 A A1877 94.580 72.726 32.522 1.00 74.53 O
ATOM 5 O5' A A1877 94.771 74.981 31.474 1.00 76.67 O
ATOM 6 C5' A A1877 94.904 74.819 30.057 1.00 79.00 C
ATOM 7 C4' A A1877 96.275 75.251 29.604 1.00 80.51 C
ATOM 8 O4' A A1877 96.435 74.865 28.216 1.00 83.11 O
ATOM 9 C3' A A1877 96.551 76.749 29.664 1.00 80.81 C
ATOM 10 O3' A A1877 97.949 76.968 29.876 1.00 79.05 O
ATOM 11 C2' A A1877 96.152 77.199 28.263 1.00 83.23 C
ATOM 12 O2' A A1877 96.781 78.408 27.886 1.00 83.30 O
ATOM 13 C1' A A1877 96.633 76.015 27.419 1.00 85.95 C
ATOM 14 N9 A A1877 95.918 75.815 26.153 1.00 90.35 N
ATOM 15 C8 A A1877 94.907 74.919 25.889 1.00 91.83 C
ATOM 16 N7 A A1877 94.454 74.978 24.659 1.00 93.43 N
ATOM 17 C5 A A1877 95.217 75.978 24.071 1.00 94.54 C
ATOM 18 C6 A A1877 95.215 76.534 22.773 1.00 96.14 C
ATOM 19 N6 A A1877 94.384 76.147 21.798 1.00 96.92 N
ATOM 20 N1 A A1877 96.106 77.518 22.511 1.00 96.72 N
ATOM 21 C2 A A1877 96.931 77.915 23.491 1.00 95.81 C
ATOM 22 N3 A A1877 97.024 77.477 24.747 1.00 94.76 N
ATOM 23 C4 A A1877 96.128 76.498 24.977 1.00 93.32 C
ATOM 24 P C A1878 98.464 77.584 31.270 1.00 77.77 P
ATOM 25 OP1 C A1878 99.950 77.640 31.249 1.00 76.68 O
ATOM 26 OP2 C A1878 97.780 76.845 32.356 1.00 77.91 O
ATOM 27 O5' C A1878 97.909 79.076 31.263 1.00 76.33 O
TER
ATOM 1 O3' A B1877 97.949 76.968 29.876 1.00 79.05 O
ATOM 2 P C B1878 98.464 77.584 31.270 1.00 77.77 P
ATOM 3 OP1 C B1878 99.950 77.640 31.249 1.00 76.68 O
ATOM 4 OP2 C B1878 97.780 76.845 32.356 1.00 77.91 O
ATOM 5 O5' C B1878 97.909 79.076 31.263 1.00 76.33 O
ATOM 6 C5' C B1878 98.555 80.102 30.493 1.00 74.06 C
ATOM 7 C4' C B1878 97.801 81.401 30.624 1.00 73.13 C
ATOM 8 O4' C B1878 96.470 81.246 30.073 1.00 74.73 O
ATOM 9 C3' C B1878 97.556 81.876 32.044 1.00 72.02 C
ATOM 10 O3' C B1878 98.680 82.582 32.534 1.00 70.91 O
ATOM 11 C2' C B1878 96.347 82.787 31.884 1.00 73.04 C
ATOM 12 O2' C B1878 96.680 84.067 31.390 1.00 72.61 O
ATOM 13 C1' C B1878 95.553 82.046 30.808 1.00 75.38 C
ATOM 14 N1 C B1878 94.453 81.193 31.319 1.00 77.61 N
ATOM 15 C2 C B1878 93.287 81.812 31.808 1.00 78.05 C
ATOM 16 O2 C B1878 93.224 83.061 31.831 1.00 78.64 O
ATOM 17 N3 C B1878 92.262 81.036 32.243 1.00 77.86 N
ATOM 18 C4 C B1878 92.368 79.703 32.211 1.00 77.25 C
ATOM 19 N4 C B1878 91.326 78.980 32.637 1.00 76.93 N
ATOM 20 C5 C B1878 93.543 79.052 31.738 1.00 76.87 C
ATOM 21 C6 C B1878 94.551 79.825 31.309 1.00 77.61 C
ATOM 22 P A B1879 98.990 82.589 34.106 1.00 71.36 P
ATOM 23 OP1 A B1879 100.014 83.647 34.351 1.00 71.53 O
ATOM 24 OP2 A B1879 99.276 81.187 34.497 1.00 70.68 O
ATOM 25 O5' A B1879 97.616 83.043 34.780 1.00 69.82 O
TER
ATOM 2 P A A1877 93.845 73.999 32.317 1.00 74.77 P
ATOM 3 OP1 A A1877 92.499 73.981 31.682 1.00 73.89 O
ATOM 4 OP2 A A1877 94.580 72.726 32.522 1.00 74.53 O
ATOM 5 O5' A A1877 94.771 74.981 31.474 1.00 76.67 O
ATOM 6 C5' A A1877 94.904 74.819 30.057 1.00 79.00 C
ATOM 7 C4' A A1877 96.275 75.251 29.604 1.00 80.51 C
ATOM 8 O4' A A1877 96.435 74.865 28.216 1.00 83.11 O
ATOM 9 C3' A A1877 96.551 76.749 29.664 1.00 80.81 C
ATOM 10 O3' A A1877 97.949 76.968 29.876 1.00 79.05 O
ATOM 11 C2' A A1877 96.152 77.199 28.263 1.00 83.23 C
ATOM 12 O2' A A1877 96.781 78.408 27.886 1.00 83.30 O
ATOM 13 C1' A A1877 96.633 76.015 27.419 1.00 85.95 C
ATOM 14 N9 A A1877 95.918 75.815 26.153 1.00 90.35 N
ATOM 15 C8 A A1877 94.907 74.919 25.889 1.00 91.83 C
ATOM 16 N7 A A1877 94.454 74.978 24.659 1.00 93.43 N
ATOM 17 C5 A A1877 95.217 75.978 24.071 1.00 94.54 C
ATOM 18 C6 A A1877 95.215 76.534 22.773 1.00 96.14 C
ATOM 19 N6 A A1877 94.384 76.147 21.798 1.00 96.92 N
ATOM 20 N1 A A1877 96.106 77.518 22.511 1.00 96.72 N
ATOM 21 C2 A A1877 96.931 77.915 23.491 1.00 95.81 C
ATOM 22 N3 A A1877 97.024 77.477 24.747 1.00 94.76 N
ATOM 23 C4 A A1877 96.128 76.498 24.977 1.00 93.32 C
ATOM 24 P C A1878 98.464 77.584 31.270 1.00 77.77 P
ATOM 25 OP1 C A1878 99.950 77.640 31.249 1.00 76.68 O
ATOM 26 OP2 C A1878 97.780 76.845 32.356 1.00 77.91 O
ATOM 27 O5' C A1878 97.909 79.076 31.263 1.00 76.33 O
TER
ATOM 1 O3' A B1877 97.949 76.968 29.876 1.00 79.05 O
ATOM 2 P C B1878 98.464 77.584 31.270 1.00 77.77 P
ATOM 3 OP1 C B1878 99.950 77.640 31.249 1.00 76.68 O
ATOM 4 OP2 C B1878 97.780 76.845 32.356 1.00 77.91 O
ATOM 5 O5' C B1878 97.909 79.076 31.263 1.00 76.33 O
ATOM 6 C5' C B1878 98.555 80.102 30.493 1.00 74.06 C
ATOM 7 C4' C B1878 97.801 81.401 30.624 1.00 73.13 C
ATOM 8 O4' C B1878 96.470 81.246 30.073 1.00 74.73 O
ATOM 9 C3' C B1878 97.556 81.876 32.044 1.00 72.02 C
ATOM 10 O3' C B1878 98.680 82.582 32.534 1.00 70.91 O
ATOM 11 C2' C B1878 96.347 82.787 31.884 1.00 73.04 C
ATOM 12 O2' C B1878 96.680 84.067 31.390 1.00 72.61 O
ATOM 13 C1' C B1878 95.553 82.046 30.808 1.00 75.38 C
ATOM 14 N1 C B1878 94.453 81.193 31.319 1.00 77.61 N
ATOM 15 C2 C B1878 93.287 81.812 31.808 1.00 78.05 C
ATOM 16 O2 C B1878 93.224 83.061 31.831 1.00 78.64 O
ATOM 17 N3 C B1878 92.262 81.036 32.243 1.00 77.86 N
ATOM 18 C4 C B1878 92.368 79.703 32.211 1.00 77.25 C
ATOM 19 N4 C B1878 91.326 78.980 32.637 1.00 76.93 N
ATOM 20 C5 C B1878 93.543 79.052 31.738 1.00 76.87 C
ATOM 21 C6 C B1878 94.551 79.825 31.309 1.00 77.61 C
ATOM 22 P A B1879 98.990 82.589 34.106 1.00 71.36 P
ATOM 23 OP1 A B1879 100.014 83.647 34.351 1.00 71.53 O
ATOM 24 OP2 A B1879 99.276 81.187 34.497 1.00 70.68 O
ATOM 25 O5' A B1879 97.616 83.043 34.780 1.00 69.82 O
TER
Atoms:
OP1: (92.499,73.981,31.682)
OP2: (94.580,72.726,32.522)
C3': (96.551,76.749,29.664)
C1': (96.633,76.015,27.419)
C5': (94.904,74.819,30.057)
O4': (96.435,74.865,28.216)
C8: (94.907,74.919,25.889)
O2': (96.781,78.408,27.886)
C6: (95.215,76.534,22.773)
C5: (95.217,75.978,24.071)
C4: (96.128,76.498,24.977)
P: (93.845,73.999,32.317)
C4': (96.275,75.251,29.604)
C2': (96.152,77.199,28.263)
C2: (96.931,77.915,23.491)
N1: (96.106,77.518,22.511)
N3: (97.024,77.477,24.747)
N6: (94.384,76.147,21.798)
N7: (94.454,74.978,24.659)
N9: (95.918,75.815,26.153)
O5': (94.771,74.981,31.474)
O3': (97.949,76.968,29.876)
OP2: (94.580,72.726,32.522)
C3': (96.551,76.749,29.664)
C1': (96.633,76.015,27.419)
C5': (94.904,74.819,30.057)
O4': (96.435,74.865,28.216)
C8: (94.907,74.919,25.889)
O2': (96.781,78.408,27.886)
C6: (95.215,76.534,22.773)
C5: (95.217,75.978,24.071)
C4: (96.128,76.498,24.977)
P: (93.845,73.999,32.317)
C4': (96.275,75.251,29.604)
C2': (96.152,77.199,28.263)
C2: (96.931,77.915,23.491)
N1: (96.106,77.518,22.511)
N3: (97.024,77.477,24.747)
N6: (94.384,76.147,21.798)
N7: (94.454,74.978,24.659)
N9: (95.918,75.815,26.153)
O5': (94.771,74.981,31.474)
O3': (97.949,76.968,29.876)
C2: (93.287,81.812,31.808)
OP1: (99.950,77.640,31.249)
OP2: (97.780,76.845,32.356)
C4: (92.368,79.703,32.211)
O5': (97.909,79.076,31.263)
C3': (97.556,81.876,32.044)
C1': (95.553,82.046,30.808)
O4': (96.470,81.246,30.073)
C5': (98.555,80.102,30.493)
P: (98.464,77.584,31.270)
O2: (93.224,83.061,31.831)
C4': (97.801,81.401,30.624)
C2': (96.347,82.787,31.884)
O2': (96.680,84.067,31.390)
N1: (94.453,81.193,31.319)
N3: (92.262,81.036,32.243)
N4: (91.326,78.980,32.637)
C6: (94.551,79.825,31.309)
C5: (93.543,79.052,31.738)
O3': (98.680,82.582,32.534)
OP1: (99.950,77.640,31.249)
OP2: (97.780,76.845,32.356)
C4: (92.368,79.703,32.211)
O5': (97.909,79.076,31.263)
C3': (97.556,81.876,32.044)
C1': (95.553,82.046,30.808)
O4': (96.470,81.246,30.073)
C5': (98.555,80.102,30.493)
P: (98.464,77.584,31.270)
O2: (93.224,83.061,31.831)
C4': (97.801,81.401,30.624)
C2': (96.347,82.787,31.884)
O2': (96.680,84.067,31.390)
N1: (94.453,81.193,31.319)
N3: (92.262,81.036,32.243)
N4: (91.326,78.980,32.637)
C6: (94.551,79.825,31.309)
C5: (93.543,79.052,31.738)
O3': (98.680,82.582,32.534)
Image (generated by PyMOL):