Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A1265:A1224
Extra
PDB:
ATOM 1 O3' A A1264 -106.854 127.256 68.352 1.00 43.82 O
ATOM 2 P A A1265 -107.010 128.858 68.202 1.00 76.73 P
ATOM 3 OP1 A A1265 -107.391 129.380 69.545 1.00 78.20 O
ATOM 4 OP2 A A1265 -107.875 129.162 67.026 1.00 80.47 O
ATOM 5 O5' A A1265 -105.528 129.353 67.868 1.00 38.50 O
ATOM 6 C5' A A1265 -104.446 129.098 68.794 1.00 36.97 C
ATOM 7 C4' A A1265 -103.101 129.347 68.144 1.00 36.08 C
ATOM 8 O4' A A1265 -102.818 128.347 67.133 1.00 35.36 O
ATOM 9 C3' A A1265 -102.935 130.671 67.428 1.00 35.86 C
ATOM 10 O3' A A1265 -102.629 131.715 68.341 1.00 35.60 O
ATOM 11 C2' A A1265 -101.787 130.382 66.466 1.00 36.23 C
ATOM 12 O2' A A1265 -100.516 130.483 67.074 1.00 36.43 O
ATOM 13 C1' A A1265 -102.044 128.919 66.096 1.00 36.41 C
ATOM 14 N9 A A1265 -102.780 128.791 64.836 1.00 33.76 N
ATOM 15 C8 A A1265 -104.122 128.567 64.654 1.00 34.00 C
ATOM 16 N7 A A1265 -104.488 128.547 63.397 1.00 34.19 N
ATOM 17 C5 A A1265 -103.308 128.768 62.702 1.00 34.78 C
ATOM 18 C6 A A1265 -103.024 128.872 61.327 1.00 35.70 C
ATOM 19 N6 A A1265 -103.955 128.766 60.374 1.00 36.37 N
ATOM 20 N1 A A1265 -101.739 129.092 60.961 1.00 35.93 N
ATOM 21 C2 A A1265 -100.818 129.201 61.918 1.00 35.35 C
ATOM 22 N3 A A1265 -100.963 129.124 63.243 1.00 35.34 N
ATOM 23 C4 A A1265 -102.247 128.905 63.573 1.00 34.51 C
ATOM 24 P G A1266 -103.110 133.210 68.018 1.00 88.16 P
ATOM 25 OP1 G A1266 -102.488 134.119 69.006 1.00108.12 O
ATOM 26 OP2 G A1266 -104.594 133.194 67.876 1.00108.85 O
ATOM 27 O5' G A1266 -102.449 133.496 66.596 1.00 46.89 O
TER
ATOM 1 O3' U B1223 -116.842 131.812 58.212 1.00 73.49 O
ATOM 2 P A B1224 -116.667 130.300 57.698 1.00 74.96 P
ATOM 3 OP1 A B1224 -116.714 130.334 56.213 1.00 82.27 O
ATOM 4 OP2 A B1224 -117.620 129.441 58.451 1.00 80.54 O
ATOM 5 O5' A B1224 -115.191 129.907 58.153 1.00 48.08 O
ATOM 6 C5' A B1224 -114.323 129.116 57.316 1.00 48.23 C
ATOM 7 C4' A B1224 -113.157 129.954 56.858 1.00 47.96 C
ATOM 8 O4' A B1224 -112.599 130.651 57.996 1.00 48.42 O
ATOM 9 C3' A B1224 -111.985 129.213 56.238 1.00 47.14 C
ATOM 10 O3' A B1224 -112.197 128.954 54.849 1.00 47.10 O
ATOM 11 C2' A B1224 -110.824 130.176 56.483 1.00 47.27 C
ATOM 12 O2' A B1224 -110.725 131.214 55.522 1.00 46.68 O
ATOM 13 C1' A B1224 -111.202 130.793 57.831 1.00 47.22 C
ATOM 14 N9 A B1224 -110.522 130.195 58.987 1.00 50.32 N
ATOM 15 C8 A B1224 -111.078 129.610 60.110 1.00 49.92 C
ATOM 16 N7 A B1224 -110.190 129.185 60.982 1.00 48.91 N
ATOM 17 C5 A B1224 -108.969 129.507 60.395 1.00 49.45 C
ATOM 18 C6 A B1224 -107.638 129.321 60.814 1.00 49.09 C
ATOM 19 N6 A B1224 -107.303 128.749 61.970 1.00 48.52 N
ATOM 20 N1 A B1224 -106.652 129.749 59.993 1.00 47.68 N
ATOM 21 C2 A B1224 -106.988 130.326 58.834 1.00 47.76 C
ATOM 22 N3 A B1224 -108.197 130.562 58.330 1.00 48.95 N
ATOM 23 C4 A B1224 -109.157 130.123 59.167 1.00 49.76 C
ATOM 24 P C B1225 -111.771 127.532 54.219 1.00 83.38 P
ATOM 25 OP1 C B1225 -112.759 127.242 53.149 1.00 55.14 O
ATOM 26 OP2 C B1225 -111.570 126.549 55.312 1.00 52.01 O
ATOM 27 O5' C B1225 -110.359 127.804 53.527 1.00 77.74 O
TER
ATOM 2 P A A1265 -107.010 128.858 68.202 1.00 76.73 P
ATOM 3 OP1 A A1265 -107.391 129.380 69.545 1.00 78.20 O
ATOM 4 OP2 A A1265 -107.875 129.162 67.026 1.00 80.47 O
ATOM 5 O5' A A1265 -105.528 129.353 67.868 1.00 38.50 O
ATOM 6 C5' A A1265 -104.446 129.098 68.794 1.00 36.97 C
ATOM 7 C4' A A1265 -103.101 129.347 68.144 1.00 36.08 C
ATOM 8 O4' A A1265 -102.818 128.347 67.133 1.00 35.36 O
ATOM 9 C3' A A1265 -102.935 130.671 67.428 1.00 35.86 C
ATOM 10 O3' A A1265 -102.629 131.715 68.341 1.00 35.60 O
ATOM 11 C2' A A1265 -101.787 130.382 66.466 1.00 36.23 C
ATOM 12 O2' A A1265 -100.516 130.483 67.074 1.00 36.43 O
ATOM 13 C1' A A1265 -102.044 128.919 66.096 1.00 36.41 C
ATOM 14 N9 A A1265 -102.780 128.791 64.836 1.00 33.76 N
ATOM 15 C8 A A1265 -104.122 128.567 64.654 1.00 34.00 C
ATOM 16 N7 A A1265 -104.488 128.547 63.397 1.00 34.19 N
ATOM 17 C5 A A1265 -103.308 128.768 62.702 1.00 34.78 C
ATOM 18 C6 A A1265 -103.024 128.872 61.327 1.00 35.70 C
ATOM 19 N6 A A1265 -103.955 128.766 60.374 1.00 36.37 N
ATOM 20 N1 A A1265 -101.739 129.092 60.961 1.00 35.93 N
ATOM 21 C2 A A1265 -100.818 129.201 61.918 1.00 35.35 C
ATOM 22 N3 A A1265 -100.963 129.124 63.243 1.00 35.34 N
ATOM 23 C4 A A1265 -102.247 128.905 63.573 1.00 34.51 C
ATOM 24 P G A1266 -103.110 133.210 68.018 1.00 88.16 P
ATOM 25 OP1 G A1266 -102.488 134.119 69.006 1.00108.12 O
ATOM 26 OP2 G A1266 -104.594 133.194 67.876 1.00108.85 O
ATOM 27 O5' G A1266 -102.449 133.496 66.596 1.00 46.89 O
TER
ATOM 1 O3' U B1223 -116.842 131.812 58.212 1.00 73.49 O
ATOM 2 P A B1224 -116.667 130.300 57.698 1.00 74.96 P
ATOM 3 OP1 A B1224 -116.714 130.334 56.213 1.00 82.27 O
ATOM 4 OP2 A B1224 -117.620 129.441 58.451 1.00 80.54 O
ATOM 5 O5' A B1224 -115.191 129.907 58.153 1.00 48.08 O
ATOM 6 C5' A B1224 -114.323 129.116 57.316 1.00 48.23 C
ATOM 7 C4' A B1224 -113.157 129.954 56.858 1.00 47.96 C
ATOM 8 O4' A B1224 -112.599 130.651 57.996 1.00 48.42 O
ATOM 9 C3' A B1224 -111.985 129.213 56.238 1.00 47.14 C
ATOM 10 O3' A B1224 -112.197 128.954 54.849 1.00 47.10 O
ATOM 11 C2' A B1224 -110.824 130.176 56.483 1.00 47.27 C
ATOM 12 O2' A B1224 -110.725 131.214 55.522 1.00 46.68 O
ATOM 13 C1' A B1224 -111.202 130.793 57.831 1.00 47.22 C
ATOM 14 N9 A B1224 -110.522 130.195 58.987 1.00 50.32 N
ATOM 15 C8 A B1224 -111.078 129.610 60.110 1.00 49.92 C
ATOM 16 N7 A B1224 -110.190 129.185 60.982 1.00 48.91 N
ATOM 17 C5 A B1224 -108.969 129.507 60.395 1.00 49.45 C
ATOM 18 C6 A B1224 -107.638 129.321 60.814 1.00 49.09 C
ATOM 19 N6 A B1224 -107.303 128.749 61.970 1.00 48.52 N
ATOM 20 N1 A B1224 -106.652 129.749 59.993 1.00 47.68 N
ATOM 21 C2 A B1224 -106.988 130.326 58.834 1.00 47.76 C
ATOM 22 N3 A B1224 -108.197 130.562 58.330 1.00 48.95 N
ATOM 23 C4 A B1224 -109.157 130.123 59.167 1.00 49.76 C
ATOM 24 P C B1225 -111.771 127.532 54.219 1.00 83.38 P
ATOM 25 OP1 C B1225 -112.759 127.242 53.149 1.00 55.14 O
ATOM 26 OP2 C B1225 -111.570 126.549 55.312 1.00 52.01 O
ATOM 27 O5' C B1225 -110.359 127.804 53.527 1.00 77.74 O
TER
Atoms:
OP1: (-107.391,129.380,69.545)
OP2: (-107.875,129.162,67.026)
C3': (-102.935,130.671,67.428)
C1': (-102.044,128.919,66.096)
C5': (-104.446,129.098,68.794)
O4': (-102.818,128.347,67.133)
C8: (-104.122,128.567,64.654)
O2': (-100.516,130.483,67.074)
C6: (-103.024,128.872,61.327)
C5: (-103.308,128.768,62.702)
C4: (-102.247,128.905,63.573)
P: (-107.010,128.858,68.202)
C4': (-103.101,129.347,68.144)
C2': (-101.787,130.382,66.466)
C2: (-100.818,129.201,61.918)
N1: (-101.739,129.092,60.961)
N3: (-100.963,129.124,63.243)
N6: (-103.955,128.766,60.374)
N7: (-104.488,128.547,63.397)
N9: (-102.780,128.791,64.836)
O5': (-105.528,129.353,67.868)
O3': (-102.629,131.715,68.341)
OP2: (-107.875,129.162,67.026)
C3': (-102.935,130.671,67.428)
C1': (-102.044,128.919,66.096)
C5': (-104.446,129.098,68.794)
O4': (-102.818,128.347,67.133)
C8: (-104.122,128.567,64.654)
O2': (-100.516,130.483,67.074)
C6: (-103.024,128.872,61.327)
C5: (-103.308,128.768,62.702)
C4: (-102.247,128.905,63.573)
P: (-107.010,128.858,68.202)
C4': (-103.101,129.347,68.144)
C2': (-101.787,130.382,66.466)
C2: (-100.818,129.201,61.918)
N1: (-101.739,129.092,60.961)
N3: (-100.963,129.124,63.243)
N6: (-103.955,128.766,60.374)
N7: (-104.488,128.547,63.397)
N9: (-102.780,128.791,64.836)
O5': (-105.528,129.353,67.868)
O3': (-102.629,131.715,68.341)
OP1: (-116.714,130.334,56.213)
OP2: (-117.620,129.441,58.451)
C3': (-111.985,129.213,56.238)
C1': (-111.202,130.793,57.831)
C5': (-114.323,129.116,57.316)
O4': (-112.599,130.651,57.996)
C8: (-111.078,129.610,60.110)
O2': (-110.725,131.214,55.522)
C6: (-107.638,129.321,60.814)
C5: (-108.969,129.507,60.395)
C4: (-109.157,130.123,59.167)
P: (-116.667,130.300,57.698)
C4': (-113.157,129.954,56.858)
C2': (-110.824,130.176,56.483)
C2: (-106.988,130.326,58.834)
N1: (-106.652,129.749,59.993)
N3: (-108.197,130.562,58.330)
N6: (-107.303,128.749,61.970)
N7: (-110.190,129.185,60.982)
N9: (-110.522,130.195,58.987)
O5': (-115.191,129.907,58.153)
O3': (-112.197,128.954,54.849)
OP2: (-117.620,129.441,58.451)
C3': (-111.985,129.213,56.238)
C1': (-111.202,130.793,57.831)
C5': (-114.323,129.116,57.316)
O4': (-112.599,130.651,57.996)
C8: (-111.078,129.610,60.110)
O2': (-110.725,131.214,55.522)
C6: (-107.638,129.321,60.814)
C5: (-108.969,129.507,60.395)
C4: (-109.157,130.123,59.167)
P: (-116.667,130.300,57.698)
C4': (-113.157,129.954,56.858)
C2': (-110.824,130.176,56.483)
C2: (-106.988,130.326,58.834)
N1: (-106.652,129.749,59.993)
N3: (-108.197,130.562,58.330)
N6: (-107.303,128.749,61.970)
N7: (-110.190,129.185,60.982)
N9: (-110.522,130.195,58.987)
O5': (-115.191,129.907,58.153)
O3': (-112.197,128.954,54.849)
Image (generated by PyMOL):