ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQO:0661:0662

Extra

PDB:
ATOM 1 O3' G A 660 28.094 115.765 27.084 1.00 49.24 O
ATOM 2 P U A 661 29.309 116.784 27.332 1.00 47.45 P
ATOM 3 OP1 U A 661 29.266 117.174 28.762 1.00 52.11 O
ATOM 4 OP2 U A 661 29.248 117.834 26.284 1.00 51.61 O
ATOM 5 O5' U A 661 30.613 115.911 27.085 1.00 47.56 O
ATOM 6 C5' U A 661 31.053 114.954 28.058 1.00 46.14 C
ATOM 7 C4' U A 661 32.552 114.810 28.000 1.00 45.54 C
ATOM 8 O4' U A 661 32.906 114.167 26.752 1.00 47.61 O
ATOM 9 C3' U A 661 33.353 116.112 28.056 1.00 47.08 C
ATOM 10 O3' U A 661 34.590 115.885 28.728 1.00 47.78 O
ATOM 11 C2' U A 661 33.626 116.392 26.579 1.00 47.98 C
ATOM 12 O2' U A 661 34.801 117.145 26.346 1.00 48.09 O
ATOM 13 C1' U A 661 33.823 114.978 26.048 1.00 49.49 C
ATOM 14 N1 U A 661 33.587 114.822 24.605 1.00 50.59 N
ATOM 15 C2 U A 661 34.694 114.609 23.797 1.00 51.57 C
ATOM 16 O2 U A 661 35.838 114.591 24.224 1.00 50.48 O
ATOM 17 N3 U A 661 34.412 114.420 22.467 1.00 53.17 N
ATOM 18 C4 U A 661 33.170 114.436 21.869 1.00 53.05 C
ATOM 19 O4 U A 661 33.083 114.242 20.655 1.00 56.12 O
ATOM 20 C5 U A 661 32.079 114.688 22.763 1.00 51.99 C
ATOM 21 C6 U A 661 32.320 114.867 24.069 1.00 50.92 C
ATOM 22 P A A 662 34.728 116.214 30.300 1.00 48.28 P
ATOM 23 OP1 A A 662 33.425 116.674 30.858 1.00 47.49 O
ATOM 24 OP2 A A 662 35.946 117.051 30.484 1.00 49.61 O
ATOM 25 O5' A A 662 35.059 114.802 30.940 1.00 46.98 O
TER

ATOM 1 O3' U B 661 34.590 115.885 28.728 1.00 47.78 O
ATOM 2 P A B 662 34.728 116.214 30.300 1.00 48.28 P
ATOM 3 OP1 A B 662 33.425 116.674 30.858 1.00 47.49 O
ATOM 4 OP2 A B 662 35.946 117.051 30.484 1.00 49.61 O
ATOM 5 O5' A B 662 35.059 114.802 30.940 1.00 46.98 O
ATOM 6 C5' A B 662 36.092 113.974 30.385 1.00 44.68 C
ATOM 7 C4' A B 662 36.904 113.358 31.490 1.00 43.38 C
ATOM 8 O4' A B 662 37.760 114.373 32.078 1.00 43.81 O
ATOM 9 C3' A B 662 36.091 112.766 32.642 1.00 43.50 C
ATOM 10 O3' A B 662 36.763 111.628 33.153 1.00 42.57 O
ATOM 11 C2' A B 662 36.127 113.878 33.679 1.00 41.97 C
ATOM 12 O2' A B 662 36.006 113.387 34.992 1.00 42.54 O
ATOM 13 C1' A B 662 37.535 114.420 33.468 1.00 43.62 C
ATOM 14 N9 A B 662 37.736 115.787 33.940 1.00 43.54 N
ATOM 15 C8 A B 662 37.079 116.942 33.599 1.00 41.67 C
ATOM 16 N7 A B 662 37.511 118.001 34.237 1.00 41.44 N
ATOM 17 C5 A B 662 38.522 117.509 35.050 1.00 43.32 C
ATOM 18 C6 A B 662 39.378 118.127 35.982 1.00 43.25 C
ATOM 19 N6 A B 662 39.350 119.427 36.263 1.00 42.61 N
ATOM 20 N1 A B 662 40.276 117.349 36.622 1.00 43.55 N
ATOM 21 C2 A B 662 40.306 116.039 36.338 1.00 44.20 C
ATOM 22 N3 A B 662 39.554 115.344 35.487 1.00 42.10 N
ATOM 23 C4 A B 662 38.673 116.149 34.871 1.00 42.84 C
ATOM 24 P U B 663 36.270 110.172 32.718 1.00 44.98 P
ATOM 25 OP1 U B 663 37.210 109.188 33.312 1.00 44.90 O
ATOM 26 OP2 U B 663 36.050 110.191 31.239 1.00 45.23 O
ATOM 27 O5' U B 663 34.849 110.029 33.413 1.00 42.45 O
TER

Atoms:
C4: (33.170,114.436,21.869)
N3: (34.412,114.420,22.467)
OP1: (29.266,117.174,28.762)
OP2: (29.248,117.834,26.284)
C2: (34.694,114.609,23.797)
C1': (33.823,114.978,26.048)
C3': (33.353,116.112,28.056)
O5': (30.613,115.911,27.085)
O4': (32.906,114.167,26.752)
C5': (31.053,114.954,28.058)
P: (29.309,116.784,27.332)
C4': (32.552,114.810,28.000)
C2': (33.626,116.392,26.579)
O2': (34.801,117.145,26.346)
N1: (33.587,114.822,24.605)
O4: (33.083,114.242,20.655)
O2: (35.838,114.591,24.224)
C6: (32.320,114.867,24.069)
C5: (32.079,114.688,22.763)
O3': (34.590,115.885,28.728)
OP1: (33.425,116.674,30.858)
OP2: (35.946,117.051,30.484)
C3': (36.091,112.766,32.642)
C1': (37.535,114.420,33.468)
C5': (36.092,113.974,30.385)
O4': (37.760,114.373,32.078)
C8: (37.079,116.942,33.599)
O2': (36.006,113.387,34.992)
C6: (39.378,118.127,35.982)
C5: (38.522,117.509,35.050)
C4: (38.673,116.149,34.871)
P: (34.728,116.214,30.300)
C4': (36.904,113.358,31.490)
C2': (36.127,113.878,33.679)
C2: (40.306,116.039,36.338)
N1: (40.276,117.349,36.622)
N3: (39.554,115.344,35.487)
N6: (39.350,119.427,36.263)
N7: (37.511,118.001,34.237)
N9: (37.736,115.787,33.940)
O5': (35.059,114.802,30.940)
O3': (36.763,111.628,33.153)
Image (generated by PyMOL):
PyMOL image
show in jmol