ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YHQ:0661:0662

Extra

PDB:
ATOM 1 O3' G A 660 28.186 115.586 26.898 1.00 40.41 O
ATOM 2 P U A 661 29.389 116.612 27.168 1.00 38.79 P
ATOM 3 OP1 U A 661 29.293 116.996 28.596 1.00 41.36 O
ATOM 4 OP2 U A 661 29.339 117.667 26.116 1.00 40.70 O
ATOM 5 O5' U A 661 30.706 115.742 26.950 1.00 36.77 O
ATOM 6 C5' U A 661 31.108 114.762 27.918 1.00 36.04 C
ATOM 7 C4' U A 661 32.604 114.571 27.880 1.00 36.33 C
ATOM 8 O4' U A 661 32.973 113.914 26.640 1.00 37.23 O
ATOM 9 C3' U A 661 33.446 115.845 27.956 1.00 37.72 C
ATOM 10 O3' U A 661 34.671 115.555 28.628 1.00 37.38 O
ATOM 11 C2' U A 661 33.740 116.123 26.485 1.00 38.52 C
ATOM 12 O2' U A 661 34.925 116.858 26.278 1.00 39.94 O
ATOM 13 C1' U A 661 33.923 114.705 25.955 1.00 40.01 C
ATOM 14 N1 U A 661 33.709 114.560 24.509 1.00 41.74 N
ATOM 15 C2 U A 661 34.829 114.406 23.707 1.00 43.54 C
ATOM 16 O2 U A 661 35.971 114.446 24.143 1.00 42.71 O
ATOM 17 N3 U A 661 34.563 114.216 22.371 1.00 45.12 N
ATOM 18 C4 U A 661 33.317 114.192 21.765 1.00 45.93 C
ATOM 19 O4 U A 661 33.232 113.981 20.552 1.00 48.14 O
ATOM 20 C5 U A 661 32.217 114.393 22.657 1.00 44.52 C
ATOM 21 C6 U A 661 32.445 114.563 23.965 1.00 42.81 C
ATOM 22 P A A 662 34.881 116.005 30.160 1.00 38.52 P
ATOM 23 OP1 A A 662 33.590 116.415 30.788 1.00 35.83 O
ATOM 24 OP2 A A 662 36.047 116.937 30.194 1.00 40.56 O
ATOM 25 O5' A A 662 35.344 114.666 30.876 1.00 35.45 O
TER

ATOM 1 O3' U B 661 34.671 115.555 28.628 1.00 37.38 O
ATOM 2 P A B 662 34.881 116.005 30.160 1.00 38.52 P
ATOM 3 OP1 A B 662 33.590 116.415 30.788 1.00 35.83 O
ATOM 4 OP2 A B 662 36.047 116.937 30.194 1.00 40.56 O
ATOM 5 O5' A B 662 35.344 114.666 30.876 1.00 35.45 O
ATOM 6 C5' A B 662 36.311 113.794 30.270 1.00 32.10 C
ATOM 7 C4' A B 662 37.093 113.086 31.343 1.00 31.27 C
ATOM 8 O4' A B 662 37.996 114.039 31.962 1.00 33.83 O
ATOM 9 C3' A B 662 36.245 112.508 32.477 1.00 32.36 C
ATOM 10 O3' A B 662 36.885 111.357 33.004 1.00 33.34 O
ATOM 11 C2' A B 662 36.282 113.622 33.513 1.00 31.41 C
ATOM 12 O2' A B 662 36.092 113.162 34.832 1.00 32.36 O
ATOM 13 C1' A B 662 37.711 114.126 33.340 1.00 32.92 C
ATOM 14 N9 A B 662 37.911 115.503 33.785 1.00 33.17 N
ATOM 15 C8 A B 662 37.204 116.637 33.466 1.00 31.29 C
ATOM 16 N7 A B 662 37.619 117.710 34.091 1.00 30.45 N
ATOM 17 C5 A B 662 38.678 117.255 34.863 1.00 31.94 C
ATOM 18 C6 A B 662 39.538 117.902 35.765 1.00 30.87 C
ATOM 19 N6 A B 662 39.458 119.193 36.064 1.00 30.72 N
ATOM 20 N1 A B 662 40.494 117.161 36.360 1.00 31.40 N
ATOM 21 C2 A B 662 40.569 115.856 36.071 1.00 32.41 C
ATOM 22 N3 A B 662 39.814 115.131 35.250 1.00 32.46 N
ATOM 23 C4 A B 662 38.876 115.901 34.672 1.00 32.43 C
ATOM 24 P U B 663 36.366 109.903 32.582 1.00 35.45 P
ATOM 25 OP1 U B 663 37.286 108.927 33.212 1.00 34.78 O
ATOM 26 OP2 U B 663 36.169 109.886 31.105 1.00 34.46 O
ATOM 27 O5' U B 663 34.932 109.797 33.267 1.00 33.97 O
TER

Atoms:
C4: (33.317,114.192,21.765)
N3: (34.563,114.216,22.371)
OP1: (29.293,116.996,28.596)
OP2: (29.339,117.667,26.116)
C2: (34.829,114.406,23.707)
C1': (33.923,114.705,25.955)
C3': (33.446,115.845,27.956)
O5': (30.706,115.742,26.950)
O4': (32.973,113.914,26.640)
C5': (31.108,114.762,27.918)
P: (29.389,116.612,27.168)
C4': (32.604,114.571,27.880)
C2': (33.740,116.123,26.485)
O2': (34.925,116.858,26.278)
N1: (33.709,114.560,24.509)
O4: (33.232,113.981,20.552)
O2: (35.971,114.446,24.143)
C6: (32.445,114.563,23.965)
C5: (32.217,114.393,22.657)
O3': (34.671,115.555,28.628)
OP1: (33.590,116.415,30.788)
OP2: (36.047,116.937,30.194)
C3': (36.245,112.508,32.477)
C1': (37.711,114.126,33.340)
C5': (36.311,113.794,30.270)
O4': (37.996,114.039,31.962)
C8: (37.204,116.637,33.466)
O2': (36.092,113.162,34.832)
C6: (39.538,117.902,35.765)
C5: (38.678,117.255,34.863)
C4: (38.876,115.901,34.672)
P: (34.881,116.005,30.160)
C4': (37.093,113.086,31.343)
C2': (36.282,113.622,33.513)
C2: (40.569,115.856,36.071)
N1: (40.494,117.161,36.360)
N3: (39.814,115.131,35.250)
N6: (39.458,119.193,36.064)
N7: (37.619,117.710,34.091)
N9: (37.911,115.503,33.785)
O5': (35.344,114.666,30.876)
O3': (36.885,111.357,33.004)
Image (generated by PyMOL):
PyMOL image
show in jmol