Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:99:910
Extra
PDB:
ATOM 1 O3' C A 8 51.692 42.338 98.687 1.00 44.45 O
ATOM 2 P C A 9 52.996 43.282 98.570 1.00 46.32 P
ATOM 3 OP1 C A 9 52.582 44.627 99.052 1.00 45.36 O
ATOM 4 OP2 C A 9 53.554 43.129 97.205 1.00 47.15 O
ATOM 5 O5' C A 9 54.080 42.692 99.582 1.00 42.80 O
ATOM 6 C5' C A 9 53.814 42.605 100.986 1.00 41.34 C
ATOM 7 C4' C A 9 54.765 41.627 101.654 1.00 42.12 C
ATOM 8 O4' C A 9 54.805 40.386 100.886 1.00 42.15 O
ATOM 9 C3' C A 9 56.220 42.056 101.836 1.00 40.68 C
ATOM 10 O3' C A 9 56.702 41.500 103.049 1.00 43.44 O
ATOM 11 C2' C A 9 56.925 41.356 100.684 1.00 40.82 C
ATOM 12 O2' C A 9 58.281 41.075 100.953 1.00 40.78 O
ATOM 13 C1' C A 9 56.148 40.048 100.612 1.00 41.58 C
ATOM 14 N1 C A 9 56.220 39.401 99.295 1.00 42.37 N
ATOM 15 C2 C A 9 56.955 38.210 99.162 1.00 42.54 C
ATOM 16 O2 C A 9 57.520 37.724 100.163 1.00 40.91 O
ATOM 17 N3 C A 9 57.035 37.622 97.948 1.00 41.51 N
ATOM 18 C4 C A 9 56.427 38.175 96.897 1.00 40.63 C
ATOM 19 N4 C A 9 56.546 37.570 95.714 1.00 41.38 N
ATOM 20 C5 C A 9 55.671 39.375 97.008 1.00 42.31 C
ATOM 21 C6 C A 9 55.593 39.948 98.212 1.00 41.97 C
ATOM 22 P A A 10 56.918 42.441 104.333 1.00 45.91 P
ATOM 23 OP1 A A 10 55.675 43.218 104.572 1.00 43.44 O
ATOM 24 OP2 A A 10 58.209 43.147 104.147 1.00 46.39 O
ATOM 25 O5' A A 10 57.110 41.415 105.534 1.00 46.88 O
TER
ATOM 1 O3' C B 9 56.702 41.500 103.049 1.00 43.44 O
ATOM 2 P A B 10 56.918 42.441 104.333 1.00 45.91 P
ATOM 3 OP1 A B 10 55.675 43.218 104.572 1.00 43.44 O
ATOM 4 OP2 A B 10 58.209 43.147 104.147 1.00 46.39 O
ATOM 5 O5' A B 10 57.110 41.415 105.534 1.00 46.88 O
ATOM 6 C5' A B 10 56.376 40.174 105.589 1.00 46.81 C
ATOM 7 C4' A B 10 56.281 39.699 107.014 1.00 47.66 C
ATOM 8 O4' A B 10 57.621 39.564 107.559 1.00 48.14 O
ATOM 9 C3' A B 10 55.603 40.682 107.947 1.00 49.16 C
ATOM 10 O3' A B 10 54.194 40.535 107.911 1.00 51.05 O
ATOM 11 C2' A B 10 56.200 40.315 109.296 1.00 49.43 C
ATOM 12 O2' A B 10 55.634 39.140 109.832 1.00 51.47 O
ATOM 13 C1' A B 10 57.647 40.021 108.902 1.00 48.83 C
ATOM 14 N9 A B 10 58.493 41.215 108.965 1.00 49.08 N
ATOM 15 C8 A B 10 58.977 41.961 107.920 1.00 49.44 C
ATOM 16 N7 A B 10 59.682 42.999 108.292 1.00 49.89 N
ATOM 17 C5 A B 10 59.670 42.932 109.676 1.00 49.97 C
ATOM 18 C6 A B 10 60.233 43.754 110.669 1.00 51.05 C
ATOM 19 N6 A B 10 60.945 44.852 110.406 1.00 49.24 N
ATOM 20 N1 A B 10 60.037 43.404 111.959 1.00 51.42 N
ATOM 21 C2 A B 10 59.324 42.303 112.222 1.00 50.78 C
ATOM 22 N3 A B 10 58.741 41.454 111.378 1.00 50.66 N
ATOM 23 C4 A B 10 58.952 41.831 110.105 1.00 49.97 C
ATOM 24 P C B 11 53.260 41.753 108.379 1.00 53.59 P
ATOM 25 OP1 C B 11 52.442 42.164 107.209 1.00 53.50 O
ATOM 26 OP2 C B 11 54.121 42.752 109.070 1.00 51.52 O
ATOM 27 O5' C B 11 52.274 41.101 109.445 1.00 53.36 O
TER
ATOM 2 P C A 9 52.996 43.282 98.570 1.00 46.32 P
ATOM 3 OP1 C A 9 52.582 44.627 99.052 1.00 45.36 O
ATOM 4 OP2 C A 9 53.554 43.129 97.205 1.00 47.15 O
ATOM 5 O5' C A 9 54.080 42.692 99.582 1.00 42.80 O
ATOM 6 C5' C A 9 53.814 42.605 100.986 1.00 41.34 C
ATOM 7 C4' C A 9 54.765 41.627 101.654 1.00 42.12 C
ATOM 8 O4' C A 9 54.805 40.386 100.886 1.00 42.15 O
ATOM 9 C3' C A 9 56.220 42.056 101.836 1.00 40.68 C
ATOM 10 O3' C A 9 56.702 41.500 103.049 1.00 43.44 O
ATOM 11 C2' C A 9 56.925 41.356 100.684 1.00 40.82 C
ATOM 12 O2' C A 9 58.281 41.075 100.953 1.00 40.78 O
ATOM 13 C1' C A 9 56.148 40.048 100.612 1.00 41.58 C
ATOM 14 N1 C A 9 56.220 39.401 99.295 1.00 42.37 N
ATOM 15 C2 C A 9 56.955 38.210 99.162 1.00 42.54 C
ATOM 16 O2 C A 9 57.520 37.724 100.163 1.00 40.91 O
ATOM 17 N3 C A 9 57.035 37.622 97.948 1.00 41.51 N
ATOM 18 C4 C A 9 56.427 38.175 96.897 1.00 40.63 C
ATOM 19 N4 C A 9 56.546 37.570 95.714 1.00 41.38 N
ATOM 20 C5 C A 9 55.671 39.375 97.008 1.00 42.31 C
ATOM 21 C6 C A 9 55.593 39.948 98.212 1.00 41.97 C
ATOM 22 P A A 10 56.918 42.441 104.333 1.00 45.91 P
ATOM 23 OP1 A A 10 55.675 43.218 104.572 1.00 43.44 O
ATOM 24 OP2 A A 10 58.209 43.147 104.147 1.00 46.39 O
ATOM 25 O5' A A 10 57.110 41.415 105.534 1.00 46.88 O
TER
ATOM 1 O3' C B 9 56.702 41.500 103.049 1.00 43.44 O
ATOM 2 P A B 10 56.918 42.441 104.333 1.00 45.91 P
ATOM 3 OP1 A B 10 55.675 43.218 104.572 1.00 43.44 O
ATOM 4 OP2 A B 10 58.209 43.147 104.147 1.00 46.39 O
ATOM 5 O5' A B 10 57.110 41.415 105.534 1.00 46.88 O
ATOM 6 C5' A B 10 56.376 40.174 105.589 1.00 46.81 C
ATOM 7 C4' A B 10 56.281 39.699 107.014 1.00 47.66 C
ATOM 8 O4' A B 10 57.621 39.564 107.559 1.00 48.14 O
ATOM 9 C3' A B 10 55.603 40.682 107.947 1.00 49.16 C
ATOM 10 O3' A B 10 54.194 40.535 107.911 1.00 51.05 O
ATOM 11 C2' A B 10 56.200 40.315 109.296 1.00 49.43 C
ATOM 12 O2' A B 10 55.634 39.140 109.832 1.00 51.47 O
ATOM 13 C1' A B 10 57.647 40.021 108.902 1.00 48.83 C
ATOM 14 N9 A B 10 58.493 41.215 108.965 1.00 49.08 N
ATOM 15 C8 A B 10 58.977 41.961 107.920 1.00 49.44 C
ATOM 16 N7 A B 10 59.682 42.999 108.292 1.00 49.89 N
ATOM 17 C5 A B 10 59.670 42.932 109.676 1.00 49.97 C
ATOM 18 C6 A B 10 60.233 43.754 110.669 1.00 51.05 C
ATOM 19 N6 A B 10 60.945 44.852 110.406 1.00 49.24 N
ATOM 20 N1 A B 10 60.037 43.404 111.959 1.00 51.42 N
ATOM 21 C2 A B 10 59.324 42.303 112.222 1.00 50.78 C
ATOM 22 N3 A B 10 58.741 41.454 111.378 1.00 50.66 N
ATOM 23 C4 A B 10 58.952 41.831 110.105 1.00 49.97 C
ATOM 24 P C B 11 53.260 41.753 108.379 1.00 53.59 P
ATOM 25 OP1 C B 11 52.442 42.164 107.209 1.00 53.50 O
ATOM 26 OP2 C B 11 54.121 42.752 109.070 1.00 51.52 O
ATOM 27 O5' C B 11 52.274 41.101 109.445 1.00 53.36 O
TER
Atoms:
C2: (56.955,38.210,99.162)
OP1: (52.582,44.627,99.052)
OP2: (53.554,43.129,97.205)
C4: (56.427,38.175,96.897)
O5': (54.080,42.692,99.582)
C3': (56.220,42.056,101.836)
C1': (56.148,40.048,100.612)
O4': (54.805,40.386,100.886)
C5': (53.814,42.605,100.986)
P: (52.996,43.282,98.570)
O2: (57.520,37.724,100.163)
C4': (54.765,41.627,101.654)
C2': (56.925,41.356,100.684)
O2': (58.281,41.075,100.953)
N1: (56.220,39.401,99.295)
N3: (57.035,37.622,97.948)
N4: (56.546,37.570,95.714)
C6: (55.593,39.948,98.212)
C5: (55.671,39.375,97.008)
O3': (56.702,41.500,103.049)
OP1: (52.582,44.627,99.052)
OP2: (53.554,43.129,97.205)
C4: (56.427,38.175,96.897)
O5': (54.080,42.692,99.582)
C3': (56.220,42.056,101.836)
C1': (56.148,40.048,100.612)
O4': (54.805,40.386,100.886)
C5': (53.814,42.605,100.986)
P: (52.996,43.282,98.570)
O2: (57.520,37.724,100.163)
C4': (54.765,41.627,101.654)
C2': (56.925,41.356,100.684)
O2': (58.281,41.075,100.953)
N1: (56.220,39.401,99.295)
N3: (57.035,37.622,97.948)
N4: (56.546,37.570,95.714)
C6: (55.593,39.948,98.212)
C5: (55.671,39.375,97.008)
O3': (56.702,41.500,103.049)
OP1: (55.675,43.218,104.572)
OP2: (58.209,43.147,104.147)
C3': (55.603,40.682,107.947)
C1': (57.647,40.021,108.902)
C5': (56.376,40.174,105.589)
O4': (57.621,39.564,107.559)
C8: (58.977,41.961,107.920)
O2': (55.634,39.140,109.832)
C6: (60.233,43.754,110.669)
C5: (59.670,42.932,109.676)
C4: (58.952,41.831,110.105)
P: (56.918,42.441,104.333)
C4': (56.281,39.699,107.014)
C2': (56.200,40.315,109.296)
C2: (59.324,42.303,112.222)
N1: (60.037,43.404,111.959)
N3: (58.741,41.454,111.378)
N6: (60.945,44.852,110.406)
N7: (59.682,42.999,108.292)
N9: (58.493,41.215,108.965)
O5': (57.110,41.415,105.534)
O3': (54.194,40.535,107.911)
OP2: (58.209,43.147,104.147)
C3': (55.603,40.682,107.947)
C1': (57.647,40.021,108.902)
C5': (56.376,40.174,105.589)
O4': (57.621,39.564,107.559)
C8: (58.977,41.961,107.920)
O2': (55.634,39.140,109.832)
C6: (60.233,43.754,110.669)
C5: (59.670,42.932,109.676)
C4: (58.952,41.831,110.105)
P: (56.918,42.441,104.333)
C4': (56.281,39.699,107.014)
C2': (56.200,40.315,109.296)
C2: (59.324,42.303,112.222)
N1: (60.037,43.404,111.959)
N3: (58.741,41.454,111.378)
N6: (60.945,44.852,110.406)
N7: (59.682,42.999,108.292)
N9: (58.493,41.215,108.965)
O5': (57.110,41.415,105.534)
O3': (54.194,40.535,107.911)
Image (generated by PyMOL):