Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0661:0662
Extra
PDB:
ATOM 1 O3' G A 660 28.206 116.155 26.808 1.00 48.12 O
ATOM 2 P U A 661 29.444 117.141 27.076 1.00 47.98 P
ATOM 3 OP1 U A 661 29.342 117.521 28.510 1.00 48.57 O
ATOM 4 OP2 U A 661 29.448 118.204 26.031 1.00 49.63 O
ATOM 5 O5' U A 661 30.733 116.232 26.855 1.00 44.36 O
ATOM 6 C5' U A 661 31.114 115.249 27.823 1.00 43.13 C
ATOM 7 C4' U A 661 32.611 115.080 27.828 1.00 43.64 C
ATOM 8 O4' U A 661 33.032 114.445 26.595 1.00 43.48 O
ATOM 9 C3' U A 661 33.420 116.370 27.938 1.00 45.15 C
ATOM 10 O3' U A 661 34.639 116.087 28.626 1.00 46.69 O
ATOM 11 C2' U A 661 33.725 116.681 26.477 1.00 44.71 C
ATOM 12 O2' U A 661 34.887 117.457 26.290 1.00 44.45 O
ATOM 13 C1' U A 661 33.956 115.279 25.927 1.00 46.11 C
ATOM 14 N1 U A 661 33.756 115.149 24.476 1.00 48.92 N
ATOM 15 C2 U A 661 34.873 114.904 23.698 1.00 49.81 C
ATOM 16 O2 U A 661 36.004 114.851 24.159 1.00 49.36 O
ATOM 17 N3 U A 661 34.620 114.733 22.357 1.00 50.82 N
ATOM 18 C4 U A 661 33.389 114.795 21.725 1.00 51.75 C
ATOM 19 O4 U A 661 33.310 114.542 20.518 1.00 54.25 O
ATOM 20 C5 U A 661 32.290 115.088 22.592 1.00 50.41 C
ATOM 21 C6 U A 661 32.504 115.249 23.903 1.00 50.45 C
ATOM 22 P A A 662 34.867 116.619 30.130 1.00 47.09 P
ATOM 23 OP1 A A 662 33.591 117.087 30.750 1.00 44.26 O
ATOM 24 OP2 A A 662 36.027 117.547 30.061 1.00 48.33 O
ATOM 25 O5' A A 662 35.334 115.311 30.901 1.00 42.12 O
TER
ATOM 1 O3' U B 661 34.639 116.087 28.626 1.00 46.69 O
ATOM 2 P A B 662 34.867 116.619 30.130 1.00 47.09 P
ATOM 3 OP1 A B 662 33.591 117.087 30.750 1.00 44.26 O
ATOM 4 OP2 A B 662 36.027 117.547 30.061 1.00 48.33 O
ATOM 5 O5' A B 662 35.334 115.311 30.901 1.00 42.12 O
ATOM 6 C5' A B 662 36.262 114.399 30.300 1.00 40.10 C
ATOM 7 C4' A B 662 37.081 113.725 31.367 1.00 39.62 C
ATOM 8 O4' A B 662 37.944 114.717 31.978 1.00 42.07 O
ATOM 9 C3' A B 662 36.277 113.102 32.508 1.00 40.98 C
ATOM 10 O3' A B 662 36.962 111.958 32.997 1.00 40.05 O
ATOM 11 C2' A B 662 36.290 114.202 33.561 1.00 40.11 C
ATOM 12 O2' A B 662 36.170 113.713 34.878 1.00 41.91 O
ATOM 13 C1' A B 662 37.690 114.770 33.367 1.00 41.96 C
ATOM 14 N9 A B 662 37.861 116.144 33.839 1.00 40.07 N
ATOM 15 C8 A B 662 37.106 117.262 33.583 1.00 39.96 C
ATOM 16 N7 A B 662 37.534 118.341 34.194 1.00 38.85 N
ATOM 17 C5 A B 662 38.649 117.904 34.894 1.00 41.12 C
ATOM 18 C6 A B 662 39.555 118.563 35.745 1.00 40.56 C
ATOM 19 N6 A B 662 39.480 119.857 36.050 1.00 41.81 N
ATOM 20 N1 A B 662 40.556 117.834 36.279 1.00 39.26 N
ATOM 21 C2 A B 662 40.636 116.532 35.978 1.00 39.93 C
ATOM 22 N3 A B 662 39.848 115.798 35.197 1.00 40.94 N
ATOM 23 C4 A B 662 38.863 116.553 34.680 1.00 41.23 C
ATOM 24 P U B 663 36.398 110.494 32.663 1.00 41.90 P
ATOM 25 OP1 U B 663 37.234 109.508 33.394 1.00 40.58 O
ATOM 26 OP2 U B 663 36.257 110.383 31.187 1.00 42.10 O
ATOM 27 O5' U B 663 34.940 110.483 33.300 1.00 37.87 O
TER
ATOM 2 P U A 661 29.444 117.141 27.076 1.00 47.98 P
ATOM 3 OP1 U A 661 29.342 117.521 28.510 1.00 48.57 O
ATOM 4 OP2 U A 661 29.448 118.204 26.031 1.00 49.63 O
ATOM 5 O5' U A 661 30.733 116.232 26.855 1.00 44.36 O
ATOM 6 C5' U A 661 31.114 115.249 27.823 1.00 43.13 C
ATOM 7 C4' U A 661 32.611 115.080 27.828 1.00 43.64 C
ATOM 8 O4' U A 661 33.032 114.445 26.595 1.00 43.48 O
ATOM 9 C3' U A 661 33.420 116.370 27.938 1.00 45.15 C
ATOM 10 O3' U A 661 34.639 116.087 28.626 1.00 46.69 O
ATOM 11 C2' U A 661 33.725 116.681 26.477 1.00 44.71 C
ATOM 12 O2' U A 661 34.887 117.457 26.290 1.00 44.45 O
ATOM 13 C1' U A 661 33.956 115.279 25.927 1.00 46.11 C
ATOM 14 N1 U A 661 33.756 115.149 24.476 1.00 48.92 N
ATOM 15 C2 U A 661 34.873 114.904 23.698 1.00 49.81 C
ATOM 16 O2 U A 661 36.004 114.851 24.159 1.00 49.36 O
ATOM 17 N3 U A 661 34.620 114.733 22.357 1.00 50.82 N
ATOM 18 C4 U A 661 33.389 114.795 21.725 1.00 51.75 C
ATOM 19 O4 U A 661 33.310 114.542 20.518 1.00 54.25 O
ATOM 20 C5 U A 661 32.290 115.088 22.592 1.00 50.41 C
ATOM 21 C6 U A 661 32.504 115.249 23.903 1.00 50.45 C
ATOM 22 P A A 662 34.867 116.619 30.130 1.00 47.09 P
ATOM 23 OP1 A A 662 33.591 117.087 30.750 1.00 44.26 O
ATOM 24 OP2 A A 662 36.027 117.547 30.061 1.00 48.33 O
ATOM 25 O5' A A 662 35.334 115.311 30.901 1.00 42.12 O
TER
ATOM 1 O3' U B 661 34.639 116.087 28.626 1.00 46.69 O
ATOM 2 P A B 662 34.867 116.619 30.130 1.00 47.09 P
ATOM 3 OP1 A B 662 33.591 117.087 30.750 1.00 44.26 O
ATOM 4 OP2 A B 662 36.027 117.547 30.061 1.00 48.33 O
ATOM 5 O5' A B 662 35.334 115.311 30.901 1.00 42.12 O
ATOM 6 C5' A B 662 36.262 114.399 30.300 1.00 40.10 C
ATOM 7 C4' A B 662 37.081 113.725 31.367 1.00 39.62 C
ATOM 8 O4' A B 662 37.944 114.717 31.978 1.00 42.07 O
ATOM 9 C3' A B 662 36.277 113.102 32.508 1.00 40.98 C
ATOM 10 O3' A B 662 36.962 111.958 32.997 1.00 40.05 O
ATOM 11 C2' A B 662 36.290 114.202 33.561 1.00 40.11 C
ATOM 12 O2' A B 662 36.170 113.713 34.878 1.00 41.91 O
ATOM 13 C1' A B 662 37.690 114.770 33.367 1.00 41.96 C
ATOM 14 N9 A B 662 37.861 116.144 33.839 1.00 40.07 N
ATOM 15 C8 A B 662 37.106 117.262 33.583 1.00 39.96 C
ATOM 16 N7 A B 662 37.534 118.341 34.194 1.00 38.85 N
ATOM 17 C5 A B 662 38.649 117.904 34.894 1.00 41.12 C
ATOM 18 C6 A B 662 39.555 118.563 35.745 1.00 40.56 C
ATOM 19 N6 A B 662 39.480 119.857 36.050 1.00 41.81 N
ATOM 20 N1 A B 662 40.556 117.834 36.279 1.00 39.26 N
ATOM 21 C2 A B 662 40.636 116.532 35.978 1.00 39.93 C
ATOM 22 N3 A B 662 39.848 115.798 35.197 1.00 40.94 N
ATOM 23 C4 A B 662 38.863 116.553 34.680 1.00 41.23 C
ATOM 24 P U B 663 36.398 110.494 32.663 1.00 41.90 P
ATOM 25 OP1 U B 663 37.234 109.508 33.394 1.00 40.58 O
ATOM 26 OP2 U B 663 36.257 110.383 31.187 1.00 42.10 O
ATOM 27 O5' U B 663 34.940 110.483 33.300 1.00 37.87 O
TER
Atoms:
C4: (33.389,114.795,21.725)
N3: (34.620,114.733,22.357)
OP1: (29.342,117.521,28.510)
OP2: (29.448,118.204,26.031)
C2: (34.873,114.904,23.698)
C1': (33.956,115.279,25.927)
C3': (33.420,116.370,27.938)
O5': (30.733,116.232,26.855)
O4': (33.032,114.445,26.595)
C5': (31.114,115.249,27.823)
P: (29.444,117.141,27.076)
C4': (32.611,115.080,27.828)
C2': (33.725,116.681,26.477)
O2': (34.887,117.457,26.290)
N1: (33.756,115.149,24.476)
O4: (33.310,114.542,20.518)
O2: (36.004,114.851,24.159)
C6: (32.504,115.249,23.903)
C5: (32.290,115.088,22.592)
O3': (34.639,116.087,28.626)
N3: (34.620,114.733,22.357)
OP1: (29.342,117.521,28.510)
OP2: (29.448,118.204,26.031)
C2: (34.873,114.904,23.698)
C1': (33.956,115.279,25.927)
C3': (33.420,116.370,27.938)
O5': (30.733,116.232,26.855)
O4': (33.032,114.445,26.595)
C5': (31.114,115.249,27.823)
P: (29.444,117.141,27.076)
C4': (32.611,115.080,27.828)
C2': (33.725,116.681,26.477)
O2': (34.887,117.457,26.290)
N1: (33.756,115.149,24.476)
O4: (33.310,114.542,20.518)
O2: (36.004,114.851,24.159)
C6: (32.504,115.249,23.903)
C5: (32.290,115.088,22.592)
O3': (34.639,116.087,28.626)
OP1: (33.591,117.087,30.750)
OP2: (36.027,117.547,30.061)
C3': (36.277,113.102,32.508)
C1': (37.690,114.770,33.367)
C5': (36.262,114.399,30.300)
O4': (37.944,114.717,31.978)
C8: (37.106,117.262,33.583)
O2': (36.170,113.713,34.878)
C6: (39.555,118.563,35.745)
C5: (38.649,117.904,34.894)
C4: (38.863,116.553,34.680)
P: (34.867,116.619,30.130)
C4': (37.081,113.725,31.367)
C2': (36.290,114.202,33.561)
C2: (40.636,116.532,35.978)
N1: (40.556,117.834,36.279)
N3: (39.848,115.798,35.197)
N6: (39.480,119.857,36.050)
N7: (37.534,118.341,34.194)
N9: (37.861,116.144,33.839)
O5': (35.334,115.311,30.901)
O3': (36.962,111.958,32.997)
OP2: (36.027,117.547,30.061)
C3': (36.277,113.102,32.508)
C1': (37.690,114.770,33.367)
C5': (36.262,114.399,30.300)
O4': (37.944,114.717,31.978)
C8: (37.106,117.262,33.583)
O2': (36.170,113.713,34.878)
C6: (39.555,118.563,35.745)
C5: (38.649,117.904,34.894)
C4: (38.863,116.553,34.680)
P: (34.867,116.619,30.130)
C4': (37.081,113.725,31.367)
C2': (36.290,114.202,33.561)
C2: (40.636,116.532,35.978)
N1: (40.556,117.834,36.279)
N3: (39.848,115.798,35.197)
N6: (39.480,119.857,36.050)
N7: (37.534,118.341,34.194)
N9: (37.861,116.144,33.839)
O5': (35.334,115.311,30.901)
O3': (36.962,111.958,32.997)
Image (generated by PyMOL):