Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A2223:A2252
Extra
PDB:
ATOM 1 O3' A A2222 113.400 -47.351 -52.050 1.00 46.25 O
ATOM 2 P A A2223 112.833 -46.874 -53.472 1.00 30.65 P
ATOM 3 OP1 A A2223 113.801 -47.333 -54.510 1.00 39.87 O
ATOM 4 OP2 A A2223 112.547 -45.428 -53.344 1.00 30.46 O
ATOM 5 O5' A A2223 111.478 -47.708 -53.582 1.00 39.94 O
ATOM 6 C5' A A2223 110.634 -47.618 -54.716 1.00 38.12 C
ATOM 7 C4' A A2223 109.198 -47.935 -54.363 1.00 45.41 C
ATOM 8 O4' A A2223 109.010 -47.824 -52.928 1.00 44.31 O
ATOM 9 C3' A A2223 108.152 -46.991 -54.930 1.00 41.57 C
ATOM 10 O3' A A2223 107.836 -47.247 -56.270 1.00 36.45 O
ATOM 11 C2' A A2223 106.982 -47.164 -53.980 1.00 43.68 C
ATOM 12 O2' A A2223 106.250 -48.343 -54.278 1.00 46.03 O
ATOM 13 C1' A A2223 107.706 -47.360 -52.652 1.00 40.89 C
ATOM 14 N9 A A2223 107.804 -46.107 -51.904 1.00 34.83 N
ATOM 15 C8 A A2223 108.880 -45.323 -51.622 1.00 38.98 C
ATOM 16 N7 A A2223 108.560 -44.263 -50.902 1.00 42.03 N
ATOM 17 C5 A A2223 107.184 -44.366 -50.708 1.00 39.18 C
ATOM 18 C6 A A2223 106.217 -43.584 -50.040 1.00 39.25 C
ATOM 19 N6 A A2223 106.426 -42.451 -49.376 1.00 38.89 N
ATOM 20 N1 A A2223 104.960 -44.014 -50.062 1.00 35.21 N
ATOM 21 C2 A A2223 104.684 -45.133 -50.716 1.00 36.09 C
ATOM 22 N3 A A2223 105.483 -45.950 -51.372 1.00 33.68 N
ATOM 23 C4 A A2223 106.728 -45.507 -51.323 1.00 36.79 C
ATOM 24 P C A2224 107.789 -46.031 -57.303 1.00 45.46 P
ATOM 25 OP1 C A2224 107.997 -46.606 -58.657 1.00 43.03 O
ATOM 26 OP2 C A2224 108.728 -44.985 -56.813 1.00 46.97 O
ATOM 27 O5' C A2224 106.316 -45.496 -57.161 1.00 41.31 O
TER
ATOM 1 O3' G B2251 111.560 -31.304 -49.655 1.00 51.31 O
ATOM 2 P A B2252 112.413 -31.760 -48.374 1.00 50.56 P
ATOM 3 OP1 A B2252 112.303 -30.674 -47.364 1.00 41.88 O
ATOM 4 OP2 A B2252 113.769 -32.180 -48.866 1.00 41.93 O
ATOM 5 O5' A B2252 111.618 -33.030 -47.870 1.00 65.45 O
ATOM 6 C5' A B2252 112.270 -34.045 -47.140 1.00 66.32 C
ATOM 7 C4' A B2252 111.328 -34.712 -46.186 1.00 45.88 C
ATOM 8 O4' A B2252 110.626 -35.770 -46.875 1.00 50.97 O
ATOM 9 C3' A B2252 112.000 -35.341 -44.993 1.00 58.61 C
ATOM 10 O3' A B2252 111.347 -34.938 -43.805 1.00 49.29 O
ATOM 11 C2' A B2252 111.925 -36.840 -45.267 1.00 60.50 C
ATOM 12 O2' A B2252 111.887 -37.677 -44.139 1.00 73.24 O
ATOM 13 C1' A B2252 110.690 -36.964 -46.135 1.00 41.05 C
ATOM 14 N9 A B2252 110.775 -38.077 -47.081 1.00 39.34 N
ATOM 15 C8 A B2252 111.938 -38.518 -47.678 1.00 42.94 C
ATOM 16 N7 A B2252 111.793 -39.557 -48.467 1.00 41.26 N
ATOM 17 C5 A B2252 110.445 -39.816 -48.369 1.00 35.35 C
ATOM 18 C6 A B2252 109.699 -40.804 -48.974 1.00 32.26 C
ATOM 19 N6 A B2252 110.221 -41.702 -49.805 1.00 30.77 N
ATOM 20 N1 A B2252 108.387 -40.804 -48.682 1.00 39.52 N
ATOM 21 C2 A B2252 107.880 -39.884 -47.839 1.00 37.89 C
ATOM 22 N3 A B2252 108.498 -38.896 -47.201 1.00 36.98 N
ATOM 23 C4 A B2252 109.799 -38.925 -47.521 1.00 36.63 C
ATOM 24 P U B2253 111.891 -33.578 -43.125 1.00 56.19 P
ATOM 25 OP1 U B2253 110.884 -32.504 -43.389 1.00 90.75 O
ATOM 26 OP2 U B2253 113.264 -33.393 -43.616 1.00 62.85 O
ATOM 27 O5' U B2253 111.931 -33.893 -41.578 1.00 60.14 O
TER
ATOM 2 P A A2223 112.833 -46.874 -53.472 1.00 30.65 P
ATOM 3 OP1 A A2223 113.801 -47.333 -54.510 1.00 39.87 O
ATOM 4 OP2 A A2223 112.547 -45.428 -53.344 1.00 30.46 O
ATOM 5 O5' A A2223 111.478 -47.708 -53.582 1.00 39.94 O
ATOM 6 C5' A A2223 110.634 -47.618 -54.716 1.00 38.12 C
ATOM 7 C4' A A2223 109.198 -47.935 -54.363 1.00 45.41 C
ATOM 8 O4' A A2223 109.010 -47.824 -52.928 1.00 44.31 O
ATOM 9 C3' A A2223 108.152 -46.991 -54.930 1.00 41.57 C
ATOM 10 O3' A A2223 107.836 -47.247 -56.270 1.00 36.45 O
ATOM 11 C2' A A2223 106.982 -47.164 -53.980 1.00 43.68 C
ATOM 12 O2' A A2223 106.250 -48.343 -54.278 1.00 46.03 O
ATOM 13 C1' A A2223 107.706 -47.360 -52.652 1.00 40.89 C
ATOM 14 N9 A A2223 107.804 -46.107 -51.904 1.00 34.83 N
ATOM 15 C8 A A2223 108.880 -45.323 -51.622 1.00 38.98 C
ATOM 16 N7 A A2223 108.560 -44.263 -50.902 1.00 42.03 N
ATOM 17 C5 A A2223 107.184 -44.366 -50.708 1.00 39.18 C
ATOM 18 C6 A A2223 106.217 -43.584 -50.040 1.00 39.25 C
ATOM 19 N6 A A2223 106.426 -42.451 -49.376 1.00 38.89 N
ATOM 20 N1 A A2223 104.960 -44.014 -50.062 1.00 35.21 N
ATOM 21 C2 A A2223 104.684 -45.133 -50.716 1.00 36.09 C
ATOM 22 N3 A A2223 105.483 -45.950 -51.372 1.00 33.68 N
ATOM 23 C4 A A2223 106.728 -45.507 -51.323 1.00 36.79 C
ATOM 24 P C A2224 107.789 -46.031 -57.303 1.00 45.46 P
ATOM 25 OP1 C A2224 107.997 -46.606 -58.657 1.00 43.03 O
ATOM 26 OP2 C A2224 108.728 -44.985 -56.813 1.00 46.97 O
ATOM 27 O5' C A2224 106.316 -45.496 -57.161 1.00 41.31 O
TER
ATOM 1 O3' G B2251 111.560 -31.304 -49.655 1.00 51.31 O
ATOM 2 P A B2252 112.413 -31.760 -48.374 1.00 50.56 P
ATOM 3 OP1 A B2252 112.303 -30.674 -47.364 1.00 41.88 O
ATOM 4 OP2 A B2252 113.769 -32.180 -48.866 1.00 41.93 O
ATOM 5 O5' A B2252 111.618 -33.030 -47.870 1.00 65.45 O
ATOM 6 C5' A B2252 112.270 -34.045 -47.140 1.00 66.32 C
ATOM 7 C4' A B2252 111.328 -34.712 -46.186 1.00 45.88 C
ATOM 8 O4' A B2252 110.626 -35.770 -46.875 1.00 50.97 O
ATOM 9 C3' A B2252 112.000 -35.341 -44.993 1.00 58.61 C
ATOM 10 O3' A B2252 111.347 -34.938 -43.805 1.00 49.29 O
ATOM 11 C2' A B2252 111.925 -36.840 -45.267 1.00 60.50 C
ATOM 12 O2' A B2252 111.887 -37.677 -44.139 1.00 73.24 O
ATOM 13 C1' A B2252 110.690 -36.964 -46.135 1.00 41.05 C
ATOM 14 N9 A B2252 110.775 -38.077 -47.081 1.00 39.34 N
ATOM 15 C8 A B2252 111.938 -38.518 -47.678 1.00 42.94 C
ATOM 16 N7 A B2252 111.793 -39.557 -48.467 1.00 41.26 N
ATOM 17 C5 A B2252 110.445 -39.816 -48.369 1.00 35.35 C
ATOM 18 C6 A B2252 109.699 -40.804 -48.974 1.00 32.26 C
ATOM 19 N6 A B2252 110.221 -41.702 -49.805 1.00 30.77 N
ATOM 20 N1 A B2252 108.387 -40.804 -48.682 1.00 39.52 N
ATOM 21 C2 A B2252 107.880 -39.884 -47.839 1.00 37.89 C
ATOM 22 N3 A B2252 108.498 -38.896 -47.201 1.00 36.98 N
ATOM 23 C4 A B2252 109.799 -38.925 -47.521 1.00 36.63 C
ATOM 24 P U B2253 111.891 -33.578 -43.125 1.00 56.19 P
ATOM 25 OP1 U B2253 110.884 -32.504 -43.389 1.00 90.75 O
ATOM 26 OP2 U B2253 113.264 -33.393 -43.616 1.00 62.85 O
ATOM 27 O5' U B2253 111.931 -33.893 -41.578 1.00 60.14 O
TER
Atoms:
OP1: (113.801,-47.333,-54.510)
OP2: (112.547,-45.428,-53.344)
C3': (108.152,-46.991,-54.930)
C1': (107.706,-47.360,-52.652)
C5': (110.634,-47.618,-54.716)
O4': (109.010,-47.824,-52.928)
C8: (108.880,-45.323,-51.622)
O2': (106.250,-48.343,-54.278)
C6: (106.217,-43.584,-50.040)
C5: (107.184,-44.366,-50.708)
C4: (106.728,-45.507,-51.323)
P: (112.833,-46.874,-53.472)
C4': (109.198,-47.935,-54.363)
C2': (106.982,-47.164,-53.980)
C2: (104.684,-45.133,-50.716)
N1: (104.960,-44.014,-50.062)
N3: (105.483,-45.950,-51.372)
N6: (106.426,-42.451,-49.376)
N7: (108.560,-44.263,-50.902)
N9: (107.804,-46.107,-51.904)
O5': (111.478,-47.708,-53.582)
O3': (107.836,-47.247,-56.270)
OP2: (112.547,-45.428,-53.344)
C3': (108.152,-46.991,-54.930)
C1': (107.706,-47.360,-52.652)
C5': (110.634,-47.618,-54.716)
O4': (109.010,-47.824,-52.928)
C8: (108.880,-45.323,-51.622)
O2': (106.250,-48.343,-54.278)
C6: (106.217,-43.584,-50.040)
C5: (107.184,-44.366,-50.708)
C4: (106.728,-45.507,-51.323)
P: (112.833,-46.874,-53.472)
C4': (109.198,-47.935,-54.363)
C2': (106.982,-47.164,-53.980)
C2: (104.684,-45.133,-50.716)
N1: (104.960,-44.014,-50.062)
N3: (105.483,-45.950,-51.372)
N6: (106.426,-42.451,-49.376)
N7: (108.560,-44.263,-50.902)
N9: (107.804,-46.107,-51.904)
O5': (111.478,-47.708,-53.582)
O3': (107.836,-47.247,-56.270)
OP1: (112.303,-30.674,-47.364)
OP2: (113.769,-32.180,-48.866)
C3': (112.000,-35.341,-44.993)
C1': (110.690,-36.964,-46.135)
C5': (112.270,-34.045,-47.140)
O4': (110.626,-35.770,-46.875)
C8: (111.938,-38.518,-47.678)
O2': (111.887,-37.677,-44.139)
C6: (109.699,-40.804,-48.974)
C5: (110.445,-39.816,-48.369)
C4: (109.799,-38.925,-47.521)
P: (112.413,-31.760,-48.374)
C4': (111.328,-34.712,-46.186)
C2': (111.925,-36.840,-45.267)
C2: (107.880,-39.884,-47.839)
N1: (108.387,-40.804,-48.682)
N3: (108.498,-38.896,-47.201)
N6: (110.221,-41.702,-49.805)
N7: (111.793,-39.557,-48.467)
N9: (110.775,-38.077,-47.081)
O5': (111.618,-33.030,-47.870)
O3': (111.347,-34.938,-43.805)
OP2: (113.769,-32.180,-48.866)
C3': (112.000,-35.341,-44.993)
C1': (110.690,-36.964,-46.135)
C5': (112.270,-34.045,-47.140)
O4': (110.626,-35.770,-46.875)
C8: (111.938,-38.518,-47.678)
O2': (111.887,-37.677,-44.139)
C6: (109.699,-40.804,-48.974)
C5: (110.445,-39.816,-48.369)
C4: (109.799,-38.925,-47.521)
P: (112.413,-31.760,-48.374)
C4': (111.328,-34.712,-46.186)
C2': (111.925,-36.840,-45.267)
C2: (107.880,-39.884,-47.839)
N1: (108.387,-40.804,-48.682)
N3: (108.498,-38.896,-47.201)
N6: (110.221,-41.702,-49.805)
N7: (111.793,-39.557,-48.467)
N9: (110.775,-38.077,-47.081)
O5': (111.618,-33.030,-47.870)
O3': (111.347,-34.938,-43.805)
Image (generated by PyMOL):