Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:99:910
Extra
PDB:
ATOM 1 O3' C A 8 51.548 42.131 98.479 1.00 42.33 O
ATOM 2 P C A 9 52.901 43.001 98.452 1.00 41.74 P
ATOM 3 OP1 C A 9 52.551 44.303 99.058 1.00 42.90 O
ATOM 4 OP2 C A 9 53.478 42.958 97.089 1.00 43.59 O
ATOM 5 O5' C A 9 53.917 42.249 99.422 1.00 40.96 O
ATOM 6 C5' C A 9 53.634 42.113 100.821 1.00 41.43 C
ATOM 7 C4' C A 9 54.649 41.209 101.486 1.00 41.60 C
ATOM 8 O4' C A 9 54.738 39.969 100.730 1.00 42.16 O
ATOM 9 C3' C A 9 56.078 41.727 101.622 1.00 39.84 C
ATOM 10 O3' C A 9 56.635 41.225 102.829 1.00 40.87 O
ATOM 11 C2' C A 9 56.786 41.072 100.447 1.00 40.39 C
ATOM 12 O2' C A 9 58.152 40.858 100.710 1.00 42.60 O
ATOM 13 C1' C A 9 56.079 39.724 100.376 1.00 41.53 C
ATOM 14 N1 C A 9 56.103 39.125 99.034 1.00 41.30 N
ATOM 15 C2 C A 9 56.810 37.932 98.829 1.00 42.03 C
ATOM 16 O2 C A 9 57.377 37.385 99.793 1.00 42.18 O
ATOM 17 N3 C A 9 56.855 37.401 97.588 1.00 42.51 N
ATOM 18 C4 C A 9 56.221 38.005 96.580 1.00 43.12 C
ATOM 19 N4 C A 9 56.291 37.449 95.366 1.00 45.10 N
ATOM 20 C5 C A 9 55.485 39.205 96.766 1.00 43.27 C
ATOM 21 C6 C A 9 55.452 39.725 97.995 1.00 42.06 C
ATOM 22 P A A 10 56.764 42.184 104.112 1.00 42.22 P
ATOM 23 OP1 A A 10 55.461 42.854 104.351 1.00 42.01 O
ATOM 24 OP2 A A 10 57.985 43.001 103.936 1.00 42.19 O
ATOM 25 O5' A A 10 57.031 41.178 105.318 1.00 44.03 O
TER
ATOM 1 O3' C B 9 56.635 41.225 102.829 1.00 40.87 O
ATOM 2 P A B 10 56.764 42.184 104.112 1.00 42.22 P
ATOM 3 OP1 A B 10 55.461 42.854 104.351 1.00 42.01 O
ATOM 4 OP2 A B 10 57.985 43.001 103.936 1.00 42.19 O
ATOM 5 O5' A B 10 57.031 41.178 105.318 1.00 44.03 O
ATOM 6 C5' A B 10 56.337 39.909 105.409 1.00 44.43 C
ATOM 7 C4' A B 10 56.210 39.482 106.856 1.00 45.13 C
ATOM 8 O4' A B 10 57.528 39.316 107.444 1.00 44.53 O
ATOM 9 C3' A B 10 55.514 40.493 107.749 1.00 44.81 C
ATOM 10 O3' A B 10 54.106 40.332 107.684 1.00 44.62 O
ATOM 11 C2' A B 10 56.090 40.180 109.122 1.00 44.85 C
ATOM 12 O2' A B 10 55.492 39.059 109.724 1.00 46.70 O
ATOM 13 C1' A B 10 57.534 39.828 108.766 1.00 45.12 C
ATOM 14 N9 A B 10 58.414 40.997 108.796 1.00 45.97 N
ATOM 15 C8 A B 10 58.906 41.706 107.729 1.00 44.53 C
ATOM 16 N7 A B 10 59.651 42.724 108.071 1.00 44.87 N
ATOM 17 C5 A B 10 59.654 42.685 109.456 1.00 46.26 C
ATOM 18 C6 A B 10 60.257 43.506 110.422 1.00 47.58 C
ATOM 19 N6 A B 10 61.002 44.573 110.122 1.00 47.77 N
ATOM 20 N1 A B 10 60.067 43.192 111.723 1.00 47.98 N
ATOM 21 C2 A B 10 59.320 42.124 112.019 1.00 47.56 C
ATOM 22 N3 A B 10 58.698 41.279 111.202 1.00 47.88 N
ATOM 23 C4 A B 10 58.906 41.621 109.917 1.00 46.89 C
ATOM 24 P C B 11 53.149 41.497 108.223 1.00 47.17 P
ATOM 25 OP1 C B 11 52.276 41.957 107.113 1.00 47.50 O
ATOM 26 OP2 C B 11 53.993 42.480 108.949 1.00 47.00 O
ATOM 27 O5' C B 11 52.208 40.755 109.269 1.00 49.14 O
TER
ATOM 2 P C A 9 52.901 43.001 98.452 1.00 41.74 P
ATOM 3 OP1 C A 9 52.551 44.303 99.058 1.00 42.90 O
ATOM 4 OP2 C A 9 53.478 42.958 97.089 1.00 43.59 O
ATOM 5 O5' C A 9 53.917 42.249 99.422 1.00 40.96 O
ATOM 6 C5' C A 9 53.634 42.113 100.821 1.00 41.43 C
ATOM 7 C4' C A 9 54.649 41.209 101.486 1.00 41.60 C
ATOM 8 O4' C A 9 54.738 39.969 100.730 1.00 42.16 O
ATOM 9 C3' C A 9 56.078 41.727 101.622 1.00 39.84 C
ATOM 10 O3' C A 9 56.635 41.225 102.829 1.00 40.87 O
ATOM 11 C2' C A 9 56.786 41.072 100.447 1.00 40.39 C
ATOM 12 O2' C A 9 58.152 40.858 100.710 1.00 42.60 O
ATOM 13 C1' C A 9 56.079 39.724 100.376 1.00 41.53 C
ATOM 14 N1 C A 9 56.103 39.125 99.034 1.00 41.30 N
ATOM 15 C2 C A 9 56.810 37.932 98.829 1.00 42.03 C
ATOM 16 O2 C A 9 57.377 37.385 99.793 1.00 42.18 O
ATOM 17 N3 C A 9 56.855 37.401 97.588 1.00 42.51 N
ATOM 18 C4 C A 9 56.221 38.005 96.580 1.00 43.12 C
ATOM 19 N4 C A 9 56.291 37.449 95.366 1.00 45.10 N
ATOM 20 C5 C A 9 55.485 39.205 96.766 1.00 43.27 C
ATOM 21 C6 C A 9 55.452 39.725 97.995 1.00 42.06 C
ATOM 22 P A A 10 56.764 42.184 104.112 1.00 42.22 P
ATOM 23 OP1 A A 10 55.461 42.854 104.351 1.00 42.01 O
ATOM 24 OP2 A A 10 57.985 43.001 103.936 1.00 42.19 O
ATOM 25 O5' A A 10 57.031 41.178 105.318 1.00 44.03 O
TER
ATOM 1 O3' C B 9 56.635 41.225 102.829 1.00 40.87 O
ATOM 2 P A B 10 56.764 42.184 104.112 1.00 42.22 P
ATOM 3 OP1 A B 10 55.461 42.854 104.351 1.00 42.01 O
ATOM 4 OP2 A B 10 57.985 43.001 103.936 1.00 42.19 O
ATOM 5 O5' A B 10 57.031 41.178 105.318 1.00 44.03 O
ATOM 6 C5' A B 10 56.337 39.909 105.409 1.00 44.43 C
ATOM 7 C4' A B 10 56.210 39.482 106.856 1.00 45.13 C
ATOM 8 O4' A B 10 57.528 39.316 107.444 1.00 44.53 O
ATOM 9 C3' A B 10 55.514 40.493 107.749 1.00 44.81 C
ATOM 10 O3' A B 10 54.106 40.332 107.684 1.00 44.62 O
ATOM 11 C2' A B 10 56.090 40.180 109.122 1.00 44.85 C
ATOM 12 O2' A B 10 55.492 39.059 109.724 1.00 46.70 O
ATOM 13 C1' A B 10 57.534 39.828 108.766 1.00 45.12 C
ATOM 14 N9 A B 10 58.414 40.997 108.796 1.00 45.97 N
ATOM 15 C8 A B 10 58.906 41.706 107.729 1.00 44.53 C
ATOM 16 N7 A B 10 59.651 42.724 108.071 1.00 44.87 N
ATOM 17 C5 A B 10 59.654 42.685 109.456 1.00 46.26 C
ATOM 18 C6 A B 10 60.257 43.506 110.422 1.00 47.58 C
ATOM 19 N6 A B 10 61.002 44.573 110.122 1.00 47.77 N
ATOM 20 N1 A B 10 60.067 43.192 111.723 1.00 47.98 N
ATOM 21 C2 A B 10 59.320 42.124 112.019 1.00 47.56 C
ATOM 22 N3 A B 10 58.698 41.279 111.202 1.00 47.88 N
ATOM 23 C4 A B 10 58.906 41.621 109.917 1.00 46.89 C
ATOM 24 P C B 11 53.149 41.497 108.223 1.00 47.17 P
ATOM 25 OP1 C B 11 52.276 41.957 107.113 1.00 47.50 O
ATOM 26 OP2 C B 11 53.993 42.480 108.949 1.00 47.00 O
ATOM 27 O5' C B 11 52.208 40.755 109.269 1.00 49.14 O
TER
Atoms:
C2: (56.810,37.932,98.829)
OP1: (52.551,44.303,99.058)
OP2: (53.478,42.958,97.089)
C4: (56.221,38.005,96.580)
O5': (53.917,42.249,99.422)
C3': (56.078,41.727,101.622)
C1': (56.079,39.724,100.376)
O4': (54.738,39.969,100.730)
C5': (53.634,42.113,100.821)
P: (52.901,43.001,98.452)
O2: (57.377,37.385,99.793)
C4': (54.649,41.209,101.486)
C2': (56.786,41.072,100.447)
O2': (58.152,40.858,100.710)
N1: (56.103,39.125,99.034)
N3: (56.855,37.401,97.588)
N4: (56.291,37.449,95.366)
C6: (55.452,39.725,97.995)
C5: (55.485,39.205,96.766)
O3': (56.635,41.225,102.829)
OP1: (52.551,44.303,99.058)
OP2: (53.478,42.958,97.089)
C4: (56.221,38.005,96.580)
O5': (53.917,42.249,99.422)
C3': (56.078,41.727,101.622)
C1': (56.079,39.724,100.376)
O4': (54.738,39.969,100.730)
C5': (53.634,42.113,100.821)
P: (52.901,43.001,98.452)
O2: (57.377,37.385,99.793)
C4': (54.649,41.209,101.486)
C2': (56.786,41.072,100.447)
O2': (58.152,40.858,100.710)
N1: (56.103,39.125,99.034)
N3: (56.855,37.401,97.588)
N4: (56.291,37.449,95.366)
C6: (55.452,39.725,97.995)
C5: (55.485,39.205,96.766)
O3': (56.635,41.225,102.829)
OP1: (55.461,42.854,104.351)
OP2: (57.985,43.001,103.936)
C3': (55.514,40.493,107.749)
C1': (57.534,39.828,108.766)
C5': (56.337,39.909,105.409)
O4': (57.528,39.316,107.444)
C8: (58.906,41.706,107.729)
O2': (55.492,39.059,109.724)
C6: (60.257,43.506,110.422)
C5: (59.654,42.685,109.456)
C4: (58.906,41.621,109.917)
P: (56.764,42.184,104.112)
C4': (56.210,39.482,106.856)
C2': (56.090,40.180,109.122)
C2: (59.320,42.124,112.019)
N1: (60.067,43.192,111.723)
N3: (58.698,41.279,111.202)
N6: (61.002,44.573,110.122)
N7: (59.651,42.724,108.071)
N9: (58.414,40.997,108.796)
O5': (57.031,41.178,105.318)
O3': (54.106,40.332,107.684)
OP2: (57.985,43.001,103.936)
C3': (55.514,40.493,107.749)
C1': (57.534,39.828,108.766)
C5': (56.337,39.909,105.409)
O4': (57.528,39.316,107.444)
C8: (58.906,41.706,107.729)
O2': (55.492,39.059,109.724)
C6: (60.257,43.506,110.422)
C5: (59.654,42.685,109.456)
C4: (58.906,41.621,109.917)
P: (56.764,42.184,104.112)
C4': (56.210,39.482,106.856)
C2': (56.090,40.180,109.122)
C2: (59.320,42.124,112.019)
N1: (60.067,43.192,111.723)
N3: (58.698,41.279,111.202)
N6: (61.002,44.573,110.122)
N7: (59.651,42.724,108.071)
N9: (58.414,40.997,108.796)
O5': (57.031,41.178,105.318)
O3': (54.106,40.332,107.684)
Image (generated by PyMOL):